New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1539456 =	54 (0.980)	3 (0.060)	3/242	NT	5.7%	coding (1114/2031 nt)	PP_1350	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	1539509 =	49 (0.940)					coding (1061/2031 nt)	PP_1350	two‑component system sensor histidine kinase/response regulator

CCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGAACGCAATGAACACCGGCTGGTTAAGTGCCTCGTC  >  NC_002947/1539309‑1539597                                                                                                                                                    |                                                                                                                                               ccATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAg                                                                                                                                               >  6:23831/1‑149 (MQ=255) acagctttacgtgacccaatggaaccacgaagccacggtgctttccggcacgccactggacgaggcacttaaccagccggtgttcattgcgttcgagccgttgaagccgttcctcccgcaactgaaggaaaccgtggaaaaacatcgAg                                                                                                                                               <  4:178207‑M1/2‑1 (MQ=255) acagctttacgtgacccaatggaaccacgaagccacggtgctttccggcacgccactggacgaggcacttaaccagccggtgttcattgcgttcgagccgttgaagccgttcctcccgcaactgaaggaaaccgtggaaaaacatcgAg                                                                                                                                               >  8:295523‑M1/148‑149 (MQ=255)  cagctttacgtgacccaatggaaccacgaagccacggtgctttccggcacgccactggacgaggcacttaaccagccggtgttcattgcgttcgagccgttgaagccgttcctcccgcaactgaaggaaaccgtggaaaaacatcgAGt                                                                                                                                              >  8:134888‑M1/147‑149 (MQ=255)      tttacgtgacccaatggaaccacgaagccacggtgctttccggcacgccactggacgaggcacttaaccagccggtgttcattgcgttcgagccgttgaagccgttcctcccgcaactgaaggaaaccgtggaaaaacatcgAGTGgc                                                                                                                                           <  5:21671‑M1/6‑1 (MQ=255)          cgtgacccaatggaaccacgaagccacggtgctttccggcacgccactggacgaggcacttaaccagccggtgttcattgcgttcgagccgttgaagccgttcctcccgcaactgaaggaaaccgtggaaaaacatcgAGTGgcg                                                                                                                                          <  3:72213‑M1/7‑1 (MQ=255)              cAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGgtcgt                                                                                                                                  >  4:343406/1‑149 (MQ=255)                 accaccGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGAAGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGc                                                                                                                               >  5:226242/1‑149 (MQ=255)                   caccGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGccc                                                                                                                             <  6:67265/149‑1 (MQ=255)                            agagCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAg                                                                                                                    >  3:128984/1‑149 (MQ=255)                            agagCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAg                                                                                                                    >  5:359776/1‑149 (MQ=255)                             gagCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCggg                                                                                                                   >  1:80442/1‑149 (MQ=255)                                cATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTa                                                                                                                >  2:49423/1‑149 (MQ=255)                                 aTTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTAc                                                                                                               <  5:57589/149‑1 (MQ=255)                                                 ccATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGcc                                                                                               >  8:49405/1‑149 (MQ=255)                                                  catcatTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGcc                                                                                               >  4:10873/1‑148 (MQ=255)                                                  catcatTTCTTCCAATGACAGACGCTGGGTGATCTCGTCGAAACGAATCACCACGCCGCGCCCGCCGCCGCCCGTCAGTCGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTCCGCCACGTTACCCGCACGATCTACGCCa                                                                                              >  1:291145/1‑149 (MQ=255)                                                  acgccactggacgaggcacttaaccagccggtgttcattgcgttcgagccgttgaagccgttcctcccgcaactgaaggaaaccgtggaaaaacatcgAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCa                                                                                              >  8:89331‑M1/99‑149 (MQ=255)                                                   atcatTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCAc                                                                                             >  3:131952/1‑149 (MQ=255)                                                    tcatTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACt                                                                                            >  4:282442/1‑149 (MQ=255)                                                     ccactggacgaggcacttaaccagccggtgttcattgcgttcgagccgttgaagccgttcctcccgcaactgaaggaaaccgtggaaaaacatcgAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACt                                                                                            <  6:329898‑M1/53‑1 (MQ=255)                                                     ccactggacgaggcacttaaccagccggtgttcattgcgttcgagccgttgaagccgttcctcccgcaactgaaggaaaccgtggaaaaacatcgAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACt                                                                                            >  5:329898‑M1/96‑148 (MQ=255)                                                             ccAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCGGGTTACCCGCTCGATCTTCGCCACTCGATGttt                                                                                    <  2:80442/148‑1 (MQ=255)                                                               aaTGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTc                                                                                 >  5:131090/1‑149 (MQ=255)                                                                aTGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTc                                                                                 >  4:72213/1‑148 (MQ=255)                                                                   aCAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCAc                                                                              <  3:10873/148‑1 (MQ=255)                                                                     aGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTcc                                                                                <  3:135653/144‑1 (MQ=255)                                                                     aGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTcc                                                                                >  4:135653/1‑144 (MQ=255)                                                                                    tcgtcgATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCgg                                                            >  1:181923/1‑149 (MQ=255)                                                                                     cgtcgATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGGCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCgg                                                            <  1:82538/148‑1 (MQ=255)                                                                                      gtcgATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGgga                                                          <  6:226242/149‑1 (MQ=255)                                                                                      gtcgATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGgga                                                          >  2:71479/1‑149 (MQ=255)                                                                                           tACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAAc                                                     >  5:326379/1‑149 (MQ=255)                                                                                              gAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCtt                                                                     >  6:215674/1‑130 (MQ=255)                                                                                              gAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCtt                                                                     <  5:215674/130‑1 (MQ=255)                                                                                              gAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGc                                                  >  2:121451/1‑149 (MQ=255)                                                                                               aaTGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGc                                                  <  6:286963/148‑1 (MQ=255)                                                                                               aaTGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGc                                                  >  5:286963/1‑148 (MQ=255)                                                                                                 tGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTc                                               <  3:282442/149‑1 (MQ=255)                                                                                                   aCCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCa‑a                                            <  1:49423/149‑1 (MQ=255)                                                                                                    ccACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑Ac                                           <  1:121451/149‑1 (MQ=255)                                                                                                     caagccgcGCCCGCCGCCGCCGGTAAGTGGGTAGAAGGTCAGGGCGTAGTGGCGAAGGTCGTCGCCCTTGGGCCAGGTTACACGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGATGCGgga                                                          >  3:60956/4‑134 (MQ=255)                                                                                                     cACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAAc                                                     <  4:191787/139‑1 (MQ=255)                                                                                                     cACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAAc                                                     >  3:191787/1‑139 (MQ=255)                                                                                                     cACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACg                                          >  3:43573/1‑149 (MQ=255)                                                                                                        gccgcGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCt                                       >  8:328598/1‑149 (MQ=255)                                                                                                        gccgcGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCATTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCt                                       <  7:328598/149‑1 (MQ=255)                                                                                                         acgcgCCCGCCGACGCCTGTCTGTGGGTAGACGGTCAGGGCGTAGTGGGGCAGGTCGTAGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGTGTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTc                                      <  4:290354/148‑1 (MQ=255)                                                                                                          cgcgCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCg                                     <  6:131090/149‑1 (MQ=255)                                                                                                            cgcccgccGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGaa                                   <  6:326379/149‑1 (MQ=255)                                                                                                             gcccgccGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGAAc                                  <  5:23831/149‑1 (MQ=255)                                                                                                               ccgccgccgccgGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGAACGc                                <  1:71479/149‑1 (MQ=255)                                                                                                                 gccgccgccgGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGAACGCaa                              <  4:128984/149‑1 (MQ=255)                                                                                                                           gTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCACACGGCTCGAACGCAATGAACACCg                     <  7:49405/149‑1 (MQ=255)                                                                                                                           gTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGAACGCAATGAACACCgg                    >  7:110861/1‑149 (MQ=255)                                                                                                                           gTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGAACGCAATGAACACCgg                    <  2:181923/149‑1 (MQ=255)                                                                                                                              aGTGGGTAGAAGGTCAGGGCGTGTTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGACACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGAACGCAATGAACACCGGCTg                 >  7:225884/1‑149 (MQ=255)                                                                                                                                   gttgAAGGTCAGGGCGTAGGGGAGCAGGTCGTCGGCCTTGGGCCAGGTGACCCGCTGGATCTTCGCCTCTGGATGTTTTTCCACGGTTTCCTTGAGTTGCGGGTGGAACGGCTTCA‑TCGGCTGGAACGCAATGAACACCGGCTGGTTat            <  2:291145/146‑2 (MQ=255)                                                                                                                                          gTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGAACGCAATGAACACCGGCTGGTTAAGTGCCTc     <  8:110861/149‑1 (MQ=255)                                                                                                                                           tCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGAACGCAATGAACACCGGCTGGTTAAGTGCCTc     <  4:311241/148‑1 (MQ=255)                                                                                                                                           tCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGAACGCAATGAACACCGGCTGGTTAAGTGCCTc     >  3:311241/1‑148 (MQ=255)                                                                                                                                              gggCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGAACGCAATGaa                          >  2:14230/1‑124 (MQ=255)                                                                                                                                              gggCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGAACGCAATGaa                          <  1:14230/124‑1 (MQ=255)                                                                                                                                               ggCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑CCGGCTCGAACGCAAGGAACACCGGCTGGTAAAGAGCCTCGTc  >  2:352866/1‑147 (MQ=255)                                                                                                                                                    |                                                                                                                                               CCATGCCGGCAGCCAGACCACCGACCGAGAGCATTTTCTCCGATTGCACCATCATTTCTTCCAATGACAGACGCTGGGTGATGTCGTCGATACGAATGACCACGCCGCGCCCGCCGCCGCCGGTCAGTGGGTAGAAGGTCAGGGCGTAGTGGCGCAGGTCGTCGCCCTTGGGCCAGGTTACCCGCTCGATCTTCGCCACTCGATGTTTTTCCACGGTTTCCTTCAGTTGCGGGAGGAACGGCTTCA‑ACGGCTCGAACGCAATGAACACCGGCTGGTTAAGTGCCTCGTC  >  NC_002947/1539309‑1539597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.