New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1545648	57 (1.030)	3 (0.060)	3/248	NT	5.3%	coding (455/1548 nt)	ampG	muropeptide permease AmpG
	?	NC_002947	= 1545699	53 (0.990)					coding (404/1548 nt)	ampG	muropeptide permease AmpG

ATCACCCCGAACATCACGTACGTGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAGGAGAGATGCTGTTGCGGGTCGCACAGGCTCATGCCG  >  NC_002947/1545507‑1545794                                                                                                                                              |                                                                                                                                                    atcaCCCCGAACATCACGTACGTGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAgcgc                                                                                                                                              >  3:46817/1‑149 (MQ=255)    aCCCCGAACATCACGTACGTGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGc                                                                                                                                           >  3:99840/1‑149 (MQ=255)    aCCCCGAACATCACGTACGTGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGc                                                                                                                                           <  2:222236/149‑1 (MQ=255)     ccccGAACATCACGTACGTGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGa                                                                                                                                                  <  3:278529/141‑1 (MQ=255)     ccccGAACATCACGTACGTGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGa                                                                                                                                                  >  4:278529/1‑141 (MQ=255)      cccGAACATCACGTACGTGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCt                                                                                                                                         >  7:32455/1‑149 (MQ=255)      cccGAACATCACGTACGTGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCt                                                                                                                                         >  5:67841/1‑149 (MQ=255)         gAACATCACGTACGTGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGa                                                                                                                                                  <  3:174144/137‑1 (MQ=255)         gAACATCACGTACGTGCCGGCCCAGGCCTTGAGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGa                                                                                                                                                  >  4:174144/1‑137 (MQ=255)          aaCATCACGTACGTGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGgcg                                                                                                                                     <  4:46817/149‑1 (MQ=255)              tCACGTACGTGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTgg                                                                                                                                 >  1:170983/1‑149 (MQ=255)              tCACGTACGTGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTgg                                                                                                                                 <  4:99840/149‑1 (MQ=255)                acgtacgtGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGtc                                                                                                                               <  6:67841/149‑1 (MQ=255)                 cgtacgtGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGtca                                                                                                                              >  3:167280/1‑149 (MQ=255)                     cgtGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGtcatca                                                                                                                           <  7:82992/148‑1 (MQ=255)                         ccGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGa                                                                                                                       <  5:94716/148‑1 (MQ=255)                         ccGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGa                                                                                                                       >  6:94716/1‑148 (MQ=255)                          cGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGtcgacgcctaccgcctggaaatcgctgatgac                                                                                                                     >  2:260768‑M1/1‑117 (MQ=255)                           ggCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGAttt                                                                                                                    >  6:366843/1‑149 (MQ=255)                              ccAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTc                                                                                                                   >  1:339379/1‑147 (MQ=255)                                   ccTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTg                                                                                                                                  >  4:57540/1‑127 (MQ=255)                                   ccTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTg                                                                                                                                  <  3:57540/127‑1 (MQ=255)                                    cTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCgg                                                                                                            >  8:98193/1‑148 (MQ=255)                                        tgCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCACGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAgg                                                                                                        <  6:264231/148‑1 (MQ=255)                                           aGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTc                                                                                                    >  3:337590/1‑149 (MQ=255)                                               aGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGAca                                                                                                <  2:178695‑M2/149‑3 (MQ=255)                                                 cTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGc                                                                                                                                                    <  8:303699/95‑1 (MQ=255)                                                 cTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGc                                                                                                                                                    >  7:303699/1‑95 (MQ=255)                                                 cTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGAcagc                                                                                              <  3:262605‑M2/149‑5 (MQ=255)                                                  tGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGTAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGAcagc                                                                                              <  1:181137‑M2/148‑5 (MQ=255)                                                  tGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGAcagc                                                                                              <  8:229785‑M2/148‑5 (MQ=255)                                                    aaGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCg                                                                                             <  1:86137/147‑1 (MQ=255)                                                    aaGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGAt                                                                                           <  2:339379/149‑1 (MQ=255)                                                       ccGGGAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTc                                                                                        <  4:98618/149‑1 (MQ=255)                                                        cGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTcc                                                                                       >  2:93879/1‑149 (MQ=255)                                                        cGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTcc                                                                                       <  7:98193/149‑1 (MQ=255)                                                         ggTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGtcgacgcctaccgcctggaaatcgctgatgaccagcgccaggccgcgctcgcagccagttaca                                                                                      <  1:260768‑M1/149‑64 (MQ=255)                                                         ggTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCt                                                                                      <  4:167280/149‑1 (MQ=255)                                                           tAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTgg                                                                                    >  4:40142/1‑149 (MQ=255)                                                            agagCCGAACCACTCGGCAAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGtcgacgcctaccgcctggaaatcgctgatgaccagcgccaggccgcgctcgcagccag                                                                                           <  2:122765‑M1/141‑59 (MQ=255)                                                              agCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTc                                                                                                    >  6:218011/1‑130 (MQ=255)                                                              agCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTc                                                                                                    <  5:218011/130‑1 (MQ=255)                                                              agCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTa                                                                                <  4:337590/149‑1 (MQ=255)                                                                 cGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTgg                                                                                    <  8:338457/143‑1 (MQ=255)                                                                 cGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTgg                                                                                    >  7:338457/1‑143 (MQ=255)                                                                       aCTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGc                                                                        >  6:256981/1‑148 (MQ=255)                                                                           ggCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAg                                                                    <  4:262605/148‑1 (MQ=255)                                                                                 gaaCAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGccac                                                               >  5:168286/1‑147 (MQ=255)                                                                                       ggCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACgg                                                       >  7:46296/1‑149 (MQ=255)                                                                                       ggCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACgg                                                       >  4:304874/1‑149 (MQ=255)                                                                                        gCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGc                                                      >  6:41651/1‑149 (MQ=255)                                                                                            cGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGa                                                                                                  >  5:94358/1‑102 (MQ=255)                                                                                            cGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGa                                                                                                  <  6:94358/102‑1 (MQ=255)                                                                                            cGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATg                                                  >  4:73984/1‑149 (MQ=255)                                                                                             ggCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTTCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATgg                                                 <  5:366843/149‑1 (MQ=255)                                                                                              gCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGc                                                >  3:6902/1‑149 (MQ=255)                                                                                                    gCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCa                                           <  3:40142/148‑1 (MQ=255)                                                                                                      gAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGc                                         >  6:143652/1‑148 (MQ=255)                                                                                                        gCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAg                                      <  5:41651/149‑1 (MQ=255)                                                                                                        gCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAg                                      <  4:6902/149‑1 (MQ=255)                                                                                                          aaGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAg                                      >  8:43641/1‑147 (MQ=255)                                                                                                           aGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAGgag                                   <  7:229785/149‑1 (MQ=255)                                                                                                                gCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAGGAGAGATg                              <  3:73984/149‑1 (MQ=255)                                                                                                                 ccACCCGGTAGCCGGCCATGTAACTGGCTGGGATCGCGGCCTGGCGCTGGTCATCATCGAATTCCACGCGGTAGGCGTCGACATCGAAGTCCTGGCGTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAGGAGAGATg                              <  1:93879/149‑1 (MQ=255)                                                                                                                      cGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAGGAGAGATGCTGTTg                        <  5:256981/149‑1 (MQ=255)                                                                                                                      cGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAGGAGAGATGCTGTTg                        >  6:315868/1‑149 (MQ=255)                                                                                                                            ccGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAGGAGAGATGCTGTTGCGGGTc                  <  2:170983/149‑1 (MQ=255)                                                                                                                                   tGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGAcagccagttacatggccggctaccgggtggctgccttgctcgccacggccggtgccctgttcttcgccgagtggttcggctctacc            <  1:260768‑M2/149‑87 (MQ=255)                                                                                                                                        cTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGAcagccagttacatggccggctaccgggtggctgccttgctcgccacggccggtgccctgttctttgccgagtggttcggctct               <  2:122765‑M2/141‑84 (MQ=255)                                                                                                                                         tGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAGga                                    <  5:112183/118‑1 (MQ=255)                                                                                                                                         tGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAGga                                    >  6:112183/1‑118 (MQ=255)                                                                                                                                         tGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCCGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAGGAGAGATGCTGTTGCGGGTCGCACAGGCTCATg     >  1:296761/1‑149 (MQ=255)                                                                                                                                           gCTGtcgacgcctaccgcctggaaatcgctgatgaccagcgccaggccgcgctcgcagccagttacatggccggctaccgggtggctgccttgctcgccacggccggtgccctgttcttcgccgagtggttcggctctaccggcttcag    <  3:262605‑M1/149‑146 (MQ=255)                                                                                                                                           gCTGtcgacgcctaccgcctggaaatcgctgatgaccagcgccaggccgcgctcgcagccagttacatggccggctaccgggtggctgccttgctcgccacggccggtgccctgttcttcgccgagtggttcggctctaccggcttca     <  8:229785‑M1/148‑145 (MQ=255)                                                                                                                                           gCTGtcgacgcctaccgcctggaaatcgctgatgaccagcgccaggccgcgctcgcagccagttacatggccggctaccgggtggctaccttgctcgccacggccggtgccctgttcttcgccgagtggttcggctctaccggcttca     <  1:181137‑M1/148‑145 (MQ=255)                                                                                                                                             tGtcgacgcctaccgcctggaaatcgctgatgaccagcgccaggccgcgctcgcagccagttacatggccggctaccgggtggctgccttgctcgccacggccggtgccctgttcttcgccgagtggttcggctctaccggcttcagct  <  2:178695‑M1/149‑148 (MQ=255)                                                                                                                                              |                                                                                                                                                    ATCACCCCGAACATCACGTACGTGCCGGCCCAGGCCTTGTGCAGGTAGCTGAAGCCGGTAGAGCCGAACCACTCGGCGAAGAACAGGGCACCGGCCGTGGCGAGCAAGGCAGCCACCCGGTAGCCGGCCATGTAACTGGCTGCGAGCGCGGCCTGGCGCTGGTCATCAGCGATTTCCAGGCGGTAGGCGTCGACAGCGATGTCCTGG‑GTAGCCGAGGCGAAGGCCACCAGTACGGCCATGGCGATCAGCCAGGAGAGATGCTGTTGCGGGTCGCACAGGCTCATGCCG  >  NC_002947/1545507‑1545794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.