| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1947775 = | 28 (0.510) | 3 (0.070) | 3/204 | NT | 11.9% | intergenic (‑36/+134) | PP_1748/PP_1749 | hypothetical protein/acetyltransferase |
| ? | NC_002947 | 1947894 = | 22 (0.500) | intergenic (‑155/+15) | PP_1748/PP_1749 | hypothetical protein/acetyltransferase | |||||
GCCACGTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGC > NC_002947/1947627‑1947914 | gCCACGTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCt > 8:48949/1‑149 (MQ=255) cgtgatgccgggcagccggagtacgtgatcatcgaggccaacgaacgtgctggcctggccaaccatgaaccgcagcccaccgccgagcgttttatcgacctgctgtttccccatagccggccgttggcctgacaactgctcggctttt > 7:195507‑M1/148‑148 (MQ=255) tgatgccgggcagccggagtacgtgatcatcgaggccaacgaacgtgctggcctggccaaccatgaaccgcagcccaccgccgagcgttttatcgacctgctgtttccccatagccggccgttggcctgacaactgctcggctttTtgt > 7:264646‑M1/146‑149 (MQ=255) tgatgccgggcagccggagtacgtgatcatcgaggccaacgaacgtgctggcctggccaaccatgaaccgcagcccaccgccgagcgttttatcgacctgctgtttccccatagccggccgttggcctgacaactgctcggctttTtgt < 6:218554‑M1/4‑1 (MQ=255) gccggcagccggagtacgtgatcatcgaggccaacgaacgtgctggcctggccaaccatgaaccgcagcccaccgccgagcgttttatcgacctgctgtttccccatagccggccgttggcctgacaactgctcggctttTTGTGGGAg < 2:262247‑M1/9‑1 (MQ=255) cgggcagccggagtacgtgatcatcgaggccaacgaacgtgctggcctggccaaccatgaaccgcagcccaccgccgagcgttttatcgacctgctgtttccccatagccggccgttggcctgacaactgctcggctttTTGTGGGAGc < 7:45231‑M1/10‑1 (MQ=255) gggcagccggagtacgtgatcatcgaggccaacgaacgtgctggcctggccaaccatgaaccgcagcccaccgccgagcgttttatcgacctgctgtttccccatagccggccgttggcctgacaactgctcggctttTTGTGGGAGCg < 4:15637‑M1/11‑1 (MQ=255) gccggagtacgtgatcatcgaggccaacgaacgtgctggccttgccaaccatgaaccgcagcccaccgccgagcgttttatcgaccttctgtttccccatagccggccgttcgcctgacaactgctcggctttTTGTGGGAGCGGCCtt > 4:339775‑M1/134‑149 (MQ=255) aTGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCtt < 7:48949/149‑1 (MQ=255) ccggagtacgtgatcatcgaggccaacgaacgtgctggcctggccaaccatgaaccgcagcccaccgccgagcgttttatcgacctgctgtttccccatagccggccgttggcctgacaactgctcggctttTTGTGGGAGCGGCCTtg < 6:148869‑M1/17‑1 (MQ=255) gtgtCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTtgt < 4:107961/148‑1 (MQ=255) gagtacgtgatcatcgaggccaacgaacgtgctggcctggccaaccatgaaccgcagcccaccgccgagcgttttatcgacctgctgtttccccatagccggccgttggcctgacaactgctcggctttTTGTGGGAGCGGCCTTgtgt > 1:262247‑M1/130‑149 (MQ=255) gagtacgtgatcatcgaggccaacgaacgtgctggcctggccaaccatgaaccgcagcccaccgccgagcgttttatcgacctgctgtttccccatagccggccgttggcctgacaactgctcggctttTTGTGGGAGCGGCCTTgtgt > 5:218554‑M1/130‑149 (MQ=255) ggTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTcgcg < 7:98254/149‑1 (MQ=255) gtgatcatcgaggccaacgaacgtgctggcctggccaaccatgaaccgcagcccaccgccgagcgttttatcgacctgctgtttccccatagccggccgttggcctgacaactgctcggctttTtg > 6:210248‑M1/124‑126 (MQ=255) gtgatcatcgaggccaacgaacgtgctggcctggccaaccatgaaccgcagcccaccgccgagcgttttatcgacctgctgtttccccatagccggccgttggcctgacaactgctcggctttTtg < 5:210248‑M1/3‑1 (MQ=255) gAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCtt < 4:127760/138‑1 (MQ=255) gAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCtt > 3:127760/1‑138 (MQ=255) aaGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGaaa < 7:16855/148‑1 (MQ=255) aaGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGaaa < 7:178343/148‑1 (MQ=255) aaGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGaaa < 8:78404/148‑1 (MQ=255) gCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACAGGTCCAGGCCTCCGGTCGGGGTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGGGTCGCGAACggg > 4:51400/1‑149 (MQ=255) ggTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCg < 2:232824/149‑1 (MQ=255) gATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTcg > 6:299331/1‑126 (MQ=255) gATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTcg < 5:299331/126‑1 (MQ=255) aTGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTTGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCg < 2:358091/149‑1 (MQ=255) gCGAGCATTTCCAGCAGCCCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGc < 6:270201/148‑1 (MQ=255) gAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCaa > 8:228663/1‑148 (MQ=255) ttGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTtgt < 5:77163/94‑1 (MQ=255) ttGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTtgt > 6:77163/1‑94 (MQ=255) gaTAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAgg > 5:330358/1‑149 (MQ=255) agaTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGCGCGGCCTTGGGGCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 3:51400/149‑1 (MQ=255) gggTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGc > 7:212366/1‑101 (MQ=255) gggTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGc < 8:212366/101‑1 (MQ=255) aGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGa < 6:330358/149‑1 (MQ=255) ctgtttccccatagccggccgttcgcctgacaactgctcggctttTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGAcaca > 5:148869‑M1/46‑149 (MQ=255) ttCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCGTGGCCCCCCAATAGCGaccc > 2:242902/1‑145 (MQ=38) ccatagccggccgttggcctgacaactgctcggctttTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAgg < 4:247353‑M1/107‑1 (MQ=255) ccatagccggccgttggcctgacaactgctcggctttTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAgg > 3:247353‑M1/38‑144 (MQ=255) tGTCCCGGCCTCCGGTCGGGTAAAAATTTTGCAGTCTTGTGGGCGCGGCCTTGTGTCGCTAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTc < 1:242902/149‑1 (MQ=255) tCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTcc < 7:228663/148‑1 (MQ=255) cAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTTTGTAGCCAAAAGGCCGCAAAACGGCCCCCGCCAAATACGCACCCAAGCAGCGACCCAAGGGGCGCGTGCCACCCCAATACCGACACAAAGCCCCGCCca > 2:79247/1‑148 (MQ=255) cAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCATGTGTGGCGGAAGGGGCGCAAAGCGGCCCCGGCAATATAGGCAGCGAAGGTGAGACCCAAGGGGCGCGTGGCACCCCCATAGCGCCACAAAGCCGCTcccc > 4:48123/1‑147 (MQ=25) ttGCAGTCTTGTGGGAGCGGCCTTGTGTCGCTAAAGGGCCGAAAAGGGGCCCCGGAAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGc < 1:79247/148‑1 (MQ=255) | GCCACGTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGC > NC_002947/1947627‑1947914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |