New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1947775 =	28 (0.510)	3 (0.070)	3/204	NT	11.9%	intergenic (‑36/+134)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
	?	NC_002947	1947894 =	22 (0.500)					intergenic (‑155/+15)	PP_1748/PP_1749	hypothetical protein/acetyltransferase

TTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCCCGGCATCACG  >  NC_002947/1947767‑1948040                                                                                                                                |                                                                                                                                                   ttGCAGTCTTGTGGGAGCGGCCTTGTGTCGCTAAAGGGCCGAAAAGGGGCCCCGGAAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGc                                                                                                                                <  1:79247/148‑1 (MQ=255)                  CGGCCTTGTCGCCCGAACGGGCCCCAAAGCGGCCCCGGCAATATCGCCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATgggg                                                                                                              >  3:48123‑M1/1‑149 (MQ=255)                     ccttgtgtcgcgaatggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATgg                                                                                                                >  3:247353‑M2/108‑144 (MQ=255)                     ccttgtgtcgcgaatggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATgg                                                                                                                <  4:247353‑M2/37‑1 (MQ=255)                        tgtgtcgcgaatggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaaAAAGCCGAGCAGTTGTCAGGCGAACGGCCGGCTATGGGGAAAcag                                                                                                        >  5:148869‑M2/105‑149 (MQ=255)                         GTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGaaa                                                                                                           >  6:330465‑M1/1‑145 (MQ=255)                         GTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGaaa                                                                                                           <  5:330465‑M1/145‑1 (MQ=255)                               CGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTc                                                                                                  <  5:37794‑M1/148‑1 (MQ=255)                                       ccGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACg                                                                                         >  4:342062/1‑149 (MQ=255)                                       ccGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACg                                                                                         >  4:109452/1‑149 (MQ=255)                                        cGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGc                                                                                        >  8:177505/1‑149 (MQ=255)                                                   cccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGtt                                                                                                                                       <  1:279652/91‑1 (MQ=255)                                                   cccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGtt                                                                                                                                       >  2:279652/1‑91 (MQ=255)                                                    ccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGaaa                                                                                                           <  8:65186/118‑1 (MQ=255)                                                    ccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGaaa                                                                                                           >  7:65186/1‑118 (MQ=255)                                                        cAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCg                                                                        <  3:342062/149‑1 (MQ=255)                                                         aaTATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCgg                                                                       <  3:109452/149‑1 (MQ=255)                                                               ggCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATg                                                                 <  6:37794/149‑1 (MQ=255)                                                               gccAGCCAAGCTGACACCCTCGGGGCGCTTCGCACCCCATTCGCCACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATg                                                                 <  3:280447/147‑1 (MQ=255)                                                                     gAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTggc                                                           >  1:326487/1‑149 (MQ=255)                                                                          tGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTggccaggc                                                      >  8:243995/1‑149 (MQ=255)                                                                           gagaCCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGt                                                               <  3:308556/139‑1 (MQ=255)                                                                           gagaCCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGt                                                               >  4:308556/1‑139 (MQ=255)                                                                              aCCCTAGGGGCACTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACCGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTtgccaggcccg                                                   >  6:245022/1‑146 (MQ=255)                                                                                  tAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCAcgt                                              >  8:16/1‑149 (MQ=255)                                                                                    ggggCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCAcgtt                                             <  7:243995/148‑1 (MQ=255)                                                                                     gggCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCAcgttcg                                           >  3:15637/1‑149 (MQ=255)                                                                                             cGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCt                                    <  2:326487/148‑1 (MQ=255)                                                                                              gCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTc                                   >  2:255509/1‑148 (MQ=255)                                                                                                 ccccATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCgat                                >  6:313614/1‑148 (MQ=255)                                                                                                  cccATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCgatga                              >  5:360684/1‑149 (MQ=255)                                                                                                  cccATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCgatga                              >  7:118440/1‑149 (MQ=255)                                                                                                  cccATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCgatga                              >  1:338558/1‑149 (MQ=255)                                                                                                  cccATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCgatga                              >  5:190212/1‑149 (MQ=255)                                                                                                   ccATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCgatgat                             >  8:45231/1‑149 (MQ=255)                                                                                                    cATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATc                            <  4:260264/149‑1 (MQ=255)                                                                                                            acacaaggccgctcccacaaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTc                    >  1:262247‑M2/21‑149 (MQ=255)                                                                                                            acacaaggccgctcccacaaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTc                    >  5:218554‑M2/21‑149 (MQ=255)                                                                                                               caaggccgctcccacaaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCgg                 <  6:148869‑M2/132‑1 (MQ=255)                                                                                                                aaggccgctcccacaaAAAGCCGAGCAGTTGTCAGGCGAACGGCCGGCTATGGGGAAACAGAAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCAAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGc                >  4:339775‑M2/17‑149 (MQ=255)                                                                                                                     cgctcccacaaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGccc           <  4:15637‑M2/138‑1 (MQ=255)                                                                                                                      gctcccacaaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCCCg          <  7:45231‑M2/139‑1 (MQ=255)                                                                                                                       ctcccacaaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGctgccggc         <  2:262247‑M2/140‑4 (MQ=255)                                                                                                                            acaaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCCCGGCATCa    <  6:218554‑M2/145‑1 (MQ=255)                                                                                                                            acaaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCCCGGCATCa    >  7:264646‑M2/5‑149 (MQ=255)                                                                                                                             caaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCAc                          >  6:210248‑M2/4‑126 (MQ=255)                                                                                                                             caaAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCAc                          <  5:210248‑M2/123‑1 (MQ=255)                                                                                                                               aAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCCCGGCATCACg  >  7:195507‑M2/2‑148 (MQ=255)                                                                                                                                |                                                                                                                                                   TTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCACGTTCGTTGGCCTCGATGATCACGTACTCCGGCTGCCCGGCATCACG  >  NC_002947/1947767‑1948040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.