New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 338356558 (1.050)45 (0.810) 41/256 NT 57.0% coding (501/546 nt) PP_2985 hypothetical protein
?NC_002947 = 5399838 10 (0.180)coding (651/1437 nt) PP_4743 hypothetical protein

Only 100 of 107 total aligned reads displayed.

TATCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCTGAGCAAATCTC  >  NC_002947/3383417‑3383710
                                                                                                                                                     |                                                                                                                                                 
tatCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGAcccc                                                                                                                                                   <  8:7402/149‑1 (MQ=255)
    gCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAtg                                                                                                                                                >  5:181431/1‑147 (MQ=255)
     cATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATAcc                                                                                                                                              <  1:324312/149‑1 (MQ=255)
      aTAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGCCCCCATACCg                                                                                                                                             >  6:77579/1‑149 (MQ=255)
        aGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggt                                                                                                                                           >  2:245490‑M1/1‑141 (MQ=255)
         gATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTACCTTATCTCGGCATGACCCCtatgtggtt                                                                                                                                          <  3:143979‑M1/149‑10 (MQ=255)
           tCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCAt                                                                                                                                         <  1:74702/149‑1 (MQ=255)
           tCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATg                                                                                                                                        <  3:335521/149‑1 (MQ=255)
             aaaCCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgct                                                                                                                                       <  7:20536‑M1/148‑13 (MQ=255)
                  ttCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAagcagc                                                                                                                                 >  3:328739/1‑149 (MQ=255)
                        aaTGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttt                                                                                                                                     >  7:101117‑M1/1‑125 (MQ=255)
                            gatggCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTGAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatca                                                                                                                       >  4:201084‑M1/1‑121 (MQ=255)
                             atggCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAAt                                                                                                                      <  7:261539/149‑1 (MQ=255)
                             atggCTGAAGCGATTCGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAAt                                                                                                                      <  2:71705/149‑1 (MQ=255)
                              tggCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagt                                                                                                                     <  3:74024‑M1/149‑31 (MQ=255)
                                gCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGa                                                                                                                    <  6:333764/148‑1 (MQ=255)
                                 cTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgat                                                                                                                  >  2:167270‑M1/1‑116 (MQ=255)
                                 cTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGa                                                                                                                    >  2:338006/1‑147 (MQ=255)
                                  tGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAagcag                                                                                                                                  <  4:165122/132‑1 (MQ=255)
                                  tGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAagcag                                                                                                                                  >  3:165122/1‑132 (MQ=255)
                                    aaGCGATTGGGCGCGAAGCAGTCTTTGCTGAGTAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGAt                                                                                                                         <  7:211451/139‑1 (MQ=255)
                                    aaGCGATTGGGCGCGAAGCAGTCTTTGCTGAGGAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGAt                                                                                                                         >  8:211451/1‑139 (MQ=255)
                                             ggCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttg                                                                                                      >  4:152900‑M1/1‑104 (MQ=255)
                                             ggCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtactt                                                                                                       <  5:129680‑M1/148‑45 (MQ=255)
                                             ggCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCttttt                                                                                                       <  7:8669/148‑1 (MQ=255)
                                              gcgcGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATa                                                                                                                        >  2:240166/1‑130 (MQ=255)
                                              gcgcGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATa                                                                                                                        <  1:240166/130‑1 (MQ=255)
                                                gcgAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcggtgatctctagtacttgct                                                                                                    >  1:55085‑M1/1‑101 (MQ=255)
                                                gcgAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGGTGCGATAATGAAAGGAGCCTTTTTctct                                                                                                   <  1:200345/149‑1 (MQ=255)
                                                gcgAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTctct                                                                                                   <  4:328739/149‑1 (MQ=255)
                                                  gAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcg                                                                                                 >  1:336349‑M1/1‑99 (MQ=255)
                                                  gAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATAACGGCATTACCACaatgaggttgattttagaagctgcataagtgatctcaagtacttgcttcg                                                                                                 >  7:296949‑M1/1‑99 (MQ=255)
                                                    aGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcggg                                                                                               <  3:325277‑M1/149‑53 (MQ=255)
                                                      cAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACATTAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATAc                                                                                             <  6:308334/149‑1 (MQ=255)
                                                       aGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACt                                                                                            >  6:343178/1‑149 (MQ=255)
                                                        gTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaat                                                                                            >  4:139776‑M1/1‑93 (MQ=255)
                                                          cTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattc                                                                                          >  1:169818‑M1/1‑91 (MQ=255)
                                                               cTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgg                                                                                                <  2:193926‑M1/137‑52 (MQ=255)
                                                               cTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgg                                                                                                >  1:193926‑M1/1‑86 (MQ=255)
                                                                 gAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATcc                                                                                   <  8:44603/148‑1 (MQ=255)
                                                                 gAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTATAGATACTCAGCCATcc                                                                                   >  7:44603/1‑148 (MQ=255)
                                                                    cAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttggttcgggatttcaatctgccatt                                                                               >  8:249553‑M1/1‑81 (MQ=255)
                                                                             tAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgta                                                                      <  1:245490‑M1/149‑78 (MQ=255)
                                                                               aTCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgcttcatcggtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtagg                                                                    <  2:55085‑M1/149‑80 (MQ=255)
                                                                               aTCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgt                                                                       <  3:152900‑M1/146‑77 (MQ=255)
                                                                                  tACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaat                                                                 <  1:167270‑M1/149‑83 (MQ=255)
                                                                                  tACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaat                                                                 <  2:336349‑M1/149‑83 (MQ=255)
                                                                                  tACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACACCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaat                                                                 >  3:269308‑M1/1‑67 (MQ=255)
                                                                                   aCTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaa                                                                                             <  5:364633‑M1/120‑55 (MQ=255)
                                                                                   aCTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaa                                                                                             >  6:364633‑M1/1‑66 (MQ=255)
                                                                                       gTTTAAATACAATAGCTTAGAGCACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAAc                                                            >  6:70840/1‑149 (MQ=255)
                                                                                       gTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaatgaatc                                                            >  8:24620‑M1/1‑62 (MQ=255)
                                                                                       gTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCaa                                                             <  2:12180/148‑1 (MQ=255)
                                                                                            aaaaCAATAGCTTAGAGAACGAATGTCCTAAATTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTTCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAg                                                       <  8:283997/146‑1 (MQ=255)
                                                                                            aaTACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGaa                                                        <  5:343178/148‑1 (MQ=255)
                                                                                             aTACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaatgaatccggctc                                                      >  1:314407‑M1/1‑56 (MQ=255)
                                                                                             aTACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGaa                                                        <  5:135714/147‑1 (MQ=255)
                                                                                             aTACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGaa                                                        >  6:135714/1‑147 (MQ=255)
                                                                                               aCAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTc                                                                <  2:321074/137‑1 (MQ=255)
                                                                                               aCAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCagatcgga                                                       >  1:321074/1‑139 (MQ=255)
                                                                                                 aaTAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCtt                                                    >  8:110868/1‑147 (MQ=255)
                                                                                                   tAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGc                                                >  6:258142/1‑149 (MQ=255)
                                                                                                           agaACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaatgaatccggctcgtctagcaaagtta                                        <  7:24620‑M1/149‑108 (MQ=255)
                                                                                                           agaACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATa                                        <  5:77579/149‑1 (MQ=255)
                                                                                                           acaaCGAATGTCCAAATATTTGCCTTATCTCGGCATGACCCCATACCGGAATGAACCAGCGCTGCGATAATGAAAGGAGCCTTTTACACTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGAGATTCAt                                         >  8:47683/3‑148 (MQ=255)
                                                                                                                      tCCTAATTTTTGACTTATCTAGTATTGACATCtatgtggttgattttagccgctgcataagttatctctattactttcttcgggaattcaaactgccattcgggatgtaggaatgaatccggctcgtctagcaaagttagacaatttc                               <  1:331976‑M1/148‑117 (MQ=255)
                                                                                                                       ccTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaatgaatccggctcgtctagcaaagttagacaatttcgg                             >  2:273590‑M1/1‑31 (MQ=255)
                                                                                                                       ccTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGa                             >  2:113118/1‑149 (MQ=255)
                                                                                                                        cTAATTTTTGCCTTATCTCGTCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATc                                                                                    <  7:242096/93‑1 (MQ=255)
                                                                                                                        cTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaatgaatccggctcgtctagcaaagttagacaatttcggt                            >  1:152881‑M1/1‑30 (MQ=255)
                                                                                                                        cTAATTTTTGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaatgaatccggctcgtctagcaaagttagacaatttcgg                             <  4:269308‑M1/148‑119 (MQ=255)
                                                                                                                        cTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATc                                                                                    >  8:242096/1‑93 (MQ=255)
                                                                                                                        cTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGAt                            >  7:30516/1‑149 (MQ=255)
                                                                                                                         tAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATc                           >  6:313981/1‑149 (MQ=255)
                                                                                                                         tAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATc                           >  1:266927/1‑149 (MQ=255)
                                                                                                                            tttttGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaatgaatccggctcgtctagcaaagttagacaatttcggtcttt                        <  7:249553‑M1/149‑124 (MQ=255)
                                                                                                                            tttttGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCa                                          <  5:196028/131‑1 (MQ=255)
                                                                                                                            tttttGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCa                                          >  6:196028/1‑131 (MQ=255)
                                                                                                                             ttttGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAgg                       >  1:78674/1‑149 (MQ=255)
                                                                                                                             ctatctcTTATATCGGCATGTGCATTTACCTTCATTAAGCAGCGATGCGATATTGAATGGAGCCTTTTTCTCTAGTTACTCAGCCATCCCACGGGTATTGCTCGAGTCGAACTGATGCTTCAGCGTTTCATACTGTTGTCGGATCGAg                        <  6:358918/142‑1 (MQ=255)
                                                                                                                               ttGCCTTATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcggcatgtaggaatgaatccggctcgtctagcaaagttagacaatttcggtctttga                      <  1:273590‑M1/148‑126 (MQ=255)
                                                                                                                                tGCCTTATGTCGTCATGACCCGtatgtggttgcttttagccgctgcttcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaattaatccggctcgtctagcaaagttagacaatttcggtctttgaa                     <  3:201084‑M1/148‑127 (MQ=255)
                                                                                                                                   cTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATcgcg                >  5:43084/1‑149 (MQ=255)
                                                                                                                                    ttATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaat                                                                 >  1:39222‑M1/1‑18 (MQ=255)
                                                                                                                                    ttATCTCGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaat                                                                 <  2:39222‑M1/100‑83 (MQ=255)
                                                                                                                                    ttATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTACACTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAATCTTCAGCCTATCATACAGATGGCGCATCGAg                        >  5:358918/1‑141 (MQ=255)
                                                                                                                                      aTCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTg                                                                        <  7:254595/91‑1 (MQ=255)
                                                                                                                                      aTCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTg                                                                        >  8:254595/1‑91 (MQ=255)
                                                                                                                                      aTCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAg                        <  2:260043/139‑1 (MQ=255)
                                                                                                                                      aTCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAg                        >  1:260043/1‑139 (MQ=255)
                                                                                                                                       tctcGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctcta                                                                                                             <  8:197609‑M1/53‑39 (MQ=255)
                                                                                                                                       tctcGGCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctcta                                                                                                             >  7:197609‑M1/1‑15 (MQ=255)
                                                                                                                                         tcGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCt             >  7:216392/1‑147 (MQ=255)
                                                                                                                                         tcGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCt             >  7:210831/1‑147 (MQ=255)
                                                                                                                                           ggCATGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaatgaatccggctcgtctagcaaagttagacaatttcggtctttgaataactcgacgat         <  3:139776‑M1/149‑139 (MQ=255)
                                                                                                                                           ggCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCt             <  2:266927/145‑1 (MQ=255)
                                                                                                                                           ggCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCTGAGc         <  8:216392/149‑1 (MQ=255)
                                                                                                                                           ggCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCTGAGc         <  8:210831/149‑1 (MQ=255)
                                                                                                                                            gCAGGACCCCtatgtggttgcttttagccgctgcatcagtgatctctagtacttgcttcgggaattcaaactgccattcgggatgtaggaatgaatccggctcgtctagcaaagttagacaatttcggtctttgaataactcgacgatg        <  8:296949‑M1/149‑140 (MQ=255)
                                                                                                                                                  ccccATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCTGAGCAAAtctc  <  5:70840/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
TATCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCTGAGCAAATCTC  >  NC_002947/3383417‑3383710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.