New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3450042	51 (0.920)	4 (0.070)	4/250	NT	6.5%	coding (1240/1278 nt)	PP_3067	hypothetical protein
	?	NC_002947	= 3450071	65 (1.200)					coding (1269/1278 nt)	PP_3067	hypothetical protein

GAATTACATTGCTATCAATAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCATTTAGTGTGTGATAAAGTTGCCGTGAAAAGGCGAGGCGGGTAGATGAGTTAACAC  >  NC_002947/3449894‑3450189                                                                                                                                                     |                                                                                                                                                    gAATTACATTGCTATCAATAGGGCGCGAGGAAGACACGCTACTGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAG                                                                                                                                                     <  8:276816‑M1/149‑1 (MQ=255)   aTTACATTGCTATCAATAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAggg                                                                                                                                                   <  2:268912/149‑1 (MQ=255)    ttACATTGCTATCAATAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAgggg                                                                                                                                                  <  8:253042/149‑1 (MQ=255)    ttACATTGCTATCAATAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAgggg                                                                                                                                                  <  5:345938/149‑1 (MQ=255)        aTTGCTATCAATAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGAt                                                                                                                                                >  2:129582/1‑147 (MQ=255)          tGCTATCAATAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAg                                                                                                                                             >  3:82092/1‑148 (MQ=255)              aTCAATAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGc                                                                                                                                        >  1:340495/1‑149 (MQ=255)               tCAATAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGaggatcgaggggc                                                                                                                                        >  2:247435‑M1/1‑135 (MQ=255)                  aTAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTg                                                                                                                                    >  1:246772/1‑149 (MQ=255)                  aTAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTg                                                                                                                                    <  4:82092/149‑1 (MQ=255)                  aTAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGCGGATCAGAAGGCCTTg                                                                                                                                    >  6:64278/1‑149 (MQ=255)                   tAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAgggg                                                                                                                                                  >  8:70299/1‑134 (MQ=255)                   tAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAgggg                                                                                                                                                  <  7:70299/134‑1 (MQ=255)                        cgcgAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTc                                                                                                                              <  3:20592/149‑1 (MQ=255)                         gcgAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTc                                                                                                                              >  5:85439/1‑148 (MQ=255)                                      gCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGaggatcgaggggcaaggccttctgatcccctgtgagc                                                                                                                <  1:247435‑M1/149‑38 (MQ=255)                                      gCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTc                                                                                                                  >  1:212595/1‑147 (MQ=255)                                           tgatgaGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGAt                                                                                                           <  2:246772/149‑1 (MQ=255)                                           tgatgaGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGAt                                                                                                           <  6:85439/149‑1 (MQ=255)                                            gatgaGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGaggatcgaggggcaaggccttctgatcccctgtgag                                                                                                                 >  5:173791‑M1/1‑106 (MQ=255)                                            gatgaGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGaggatcgaggggcaaggccttctgatcccctgtgag                                                                                                                 <  6:173791‑M1/142‑37 (MQ=255)                                              tgaGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGtc                                                                                                        <  2:339842/149‑1 (MQ=255)                                               gaGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGt                                                                                                         >  2:348730/1‑147 (MQ=255)                                                aGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGtcc                                                                                                       <  8:23701/148‑1 (MQ=255)                                                       ggTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCaa                                                                                               <  1:241084/149‑1 (MQ=255)                                                          gCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGTATCAGAAGGCCTTTCCCCTCGATCCTATGGTCTAGAGATGTCCTCCTCCAAg                                                                                              >  3:189546/1‑147 (MQ=255)                                                          gCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTCGACTAGCGATGTCCTCCGCCAAg                                                                                              >  4:290186/1‑147 (MQ=255)                                                           cTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAg                                                                                              >  3:116139/1‑146 (MQ=255)                                                              aaGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACTAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCAt                                                                                        <  2:340495/149‑1 (MQ=255)                                                              aaGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGc                                                                                          <  6:165153/147‑1 (MQ=255)                                                                 aTACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGct                                                                                     <  7:73901/149‑1 (MQ=255)                                                                 aTACGGAGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGct                                                                                     >  1:76302/1‑149 (MQ=255)                                                                      gCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCtctc                                                                                  >  5:66417/1‑147 (MQ=255)                                                                           aGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGt                                                                           <  4:116139/149‑1 (MQ=255)                                                                            ggAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGtt                                                                          >  8:197781/1‑149 (MQ=255)                                                                             gAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGtt                                                                          >  1:10353/1‑148 (MQ=255)                                                                                ctgctgCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATc                                                                      <  1:348730/149‑1 (MQ=255)                                                                                   ctgcAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGAc                                                                   >  1:276604/1‑149 (MQ=255)                                                                                    tgcAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACt                                                                  >  5:1221/1‑149 (MQ=255)                                                                                     gcAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCtctc                                                                                  <  4:296498/132‑1 (MQ=255)                                                                                     gcAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCtctc                                                                                  >  3:296498/1‑132 (MQ=255)                                                                                     gcAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTc                                                                 >  6:296722/1‑149 (MQ=255)                                                                                            ttttCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTAc                                                           <  3:290186/148‑1 (MQ=255)                                                                                              ttCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAg                                                                                                               <  3:146610/94‑1 (MQ=255)                                                                                              ttCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAg                                                                                                               >  4:146610/1‑94 (MQ=255)                                                                                               tCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCAtt                                                       >  4:292258/1‑149 (MQ=255)                                                                                               tCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCAtt                                                       >  2:55607/1‑149 (MQ=255)                                                                                                cTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTTGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCAtt                                                       <  5:64278/148‑1 (MQ=255)                                                                                                cTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCAtt                                                       >  2:163077/1‑148 (MQ=255)                                                                                                cTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCAtt                                                       <  5:296722/148‑1 (MQ=255)                                                                                                cTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCAtt                                                       <  7:197781/148‑1 (MQ=255)                                                                                                    aTTTTAGAAAAATGCGTCTAGTTACGAGTTGGAGCTGACCCAGCTCACAGGGGATCAGAAGGCCGTGCCCCTCGCTCCTCTGGTCTAGCGATGTCCTCCGCCACGGAGCATGCTCTCCAGCAGTTTATCGACTCGCTTACCATTTAgt                                                   <  2:225644/148‑1 (MQ=255)                                                                                                       tGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCATTTAgtgtg                                                <  2:212595/148‑1 (MQ=255)                                                                                                           aaaaaGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTACTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCATTTAGTGTGTGATa                                           <  2:76302/149‑1 (MQ=255)                                                                                                             aaaGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCATTTAGTGTGTGATaaa                                         <  3:146621/149‑1 (MQ=255)                                                                                                                     cTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCATTTAGTGTGTGATAAAGTTGCCGt                                 <  1:163077/149‑1 (MQ=255)                                                                                                                           aCGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCATTTAGTGTGTGATAAAGTTGCCGTGAAAag                           >  6:5763/1‑149 (MQ=255)                                                                                                                           aCGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCATTTAGTGTGTGATAAAGTTGCCGTGAAAag                           >  7:92985/1‑149 (MQ=255)                                                                                                                                     gCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCATTTAGTGTGTGATAAAGTTGCCGTGAAAAGGCGAGGCggg                 <  2:276604/149‑1 (MQ=255)                                                                                                                                      cTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCATTTAGTGTGTGATAAAGTTGCCGt                                 >  3:45953/1‑132 (MQ=255)                                                                                                                                      cTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCATTTAGTGTGTGATAAAGTTGCCGt                                 <  4:45953/132‑1 (MQ=255)                                                                                                                                            caGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCATTTAGTGTGTGATAAAGTTGCCGTGAAAAGGCGAGGCGGGTAGATGa          <  6:107113/149‑1 (MQ=255)                                                                                                                                              gCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTctgtgagctgtgtcagctccaactcgtaactagccgcctttttctcaaattcagaaaataattgcagcagttccttacgccgtatctttagcacctccagctcatcattagc        <  1:247435‑M2/149‑113 (MQ=255)                                                                                                                                               cTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTctgtgagctgtgtcagctccaactcgtaactagccgcctttttctcaaattcagaaaataattgcagcagttccttacgccgtatctttagcacctccagctcatc              <  6:173791‑M2/142‑107 (MQ=255)                                                                                                                                               cTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTctgtgagctgtgtcagctccaactcgtaactagccgcctttttctcaaattcagaaaataattgcagcagttccttacgccgtatctttagcacctccagctcatc              >  5:173791‑M2/1‑36 (MQ=255)                                                                                                                                                  acaGGGGATCAGAAGGCCTTGACCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTAATCGACACGCTTACCATTTAGTGTGTGATAAAGTTGCCGTGAAAAGGCGAGGCGGGTAGATGAGTTaa     >  3:225113/1‑148 (MQ=255)                                                                                                                                                    aGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCATTTAGTGTGTGATAAAGTTGCCGTGAAAAGGCGAGGCGGGTAGATGAGTTAacac  <  6:1221/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GAATTACATTGCTATCAATAGGGCGCGAGGAAGACACGCTAATGATGAGCTGGAGGTGCTAAAGATACGGCGTAAGGAACTGCTGCAATTATTTTCTGAATTTGAGAAAAAGGCGGCTAGTTACGAGTTGGAGCTGACACAGCTCACAGGGGATCAGAAGGCCTTGCCCCTCGATCCTCTGGTCTAGCGATGTCCTCCTCCAAGGAGCATGCTCTCAAGCAGTTTATCGACTCGCTTACCATTTAGTGTGTGATAAAGTTGCCGTGAAAAGGCGAGGCGGGTAGATGAGTTAACAC  >  NC_002947/3449894‑3450189

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.