New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3479997 =	56 (1.010)	3 (0.060)	3/242	NT	5.5%	coding (1222/2496 nt)	PP_3090	OmpA domain‑containing protein
	?	NC_002947	3480070 =	50 (0.960)					coding (1149/2496 nt)	PP_3090	OmpA domain‑containing protein

CACCAGTGCCGCCAGGCCGGCGGCGCCCACCCACCCGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGAAATAGAAACCGCGCAGCATTTCGGCATTCTGG  >  NC_002947/3479854‑3480136                                                                                                                                                |                                                                                                                                            cACCAGTGCCGCCAGGCCGGCGGCGCCCACCCACCCGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGc                                                                                                                                        >  8:80366/1‑149 (MQ=255)       cgctggagctggccgcgctcaagccgcgcctgcatcagttcgtcgacagcctgctgcgtgccaacccttaccagaatgccgaaatgctgcgcggtttctatttcaccgcggcgctgcaggccgacgaggctcagtggGGCTGCCGGCAg                                                                                                                                  <  2:355921‑M1/12‑1 (MQ=255)        gccgccAGGCCGGCGGCGCCCACCCACCCGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGt                                                                                                                                 >  1:227527/1‑149 (MQ=255)                         gcCCACCCACCCGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCgt                                                                                                                >  3:103146/1‑149 (MQ=255)                         gcCCACCCACCCGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGACTGCCGGCAg                                                                                                                                  <  8:311156/131‑1 (MQ=255)                         gcCCACCCACCCGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGACTGCCGGCAg                                                                                                                                  >  7:311156/1‑131 (MQ=255)                         gcCCACCCACCCGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCAGCCAGCCGGcgc                                                                                                                                  >  1:166003/1‑129 (MQ=255)                         gcCCACCCACCCGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCAGCCAGCCGGcgc                                                                                                                                  <  2:166003/131‑3 (MQ=255)                          cccacccaCCCGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCgtg                                                                                                               <  3:318134/149‑1 (MQ=255)                           ccacccacCCGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGc                                                                                                                  <  6:120608/145‑1 (MQ=255)                           ccacccacCCGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGc                                                                                                                  >  5:120608/1‑145 (MQ=255)                              cccacccGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTc                                                                                                            >  4:58026/1‑148 (MQ=255)                               ccacccGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGa                                                                                                          <  7:80366/149‑1 (MQ=255)                                        cTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGc                                                                                                 >  2:5764/1‑149 (MQ=255)                                        cTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGc                                                                                                 >  3:177144/1‑149 (MQ=255)                                               cGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGc                                                                                          >  3:119520/1‑149 (MQ=255)                                                   gTTCAGGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCcaca                                                                                      >  7:324456/1‑149 (MQ=255)                                                   gTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCcaca                                                                                      >  4:53861/1‑149 (MQ=255)                                                      agcctgctgcgtgccaacccttaccagaatgccgaaatgctgcgcggtttctatttcaccgcggcgctgcaggccgacgaggctcagtggGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGc                                                                                   <  1:2984‑M1/59‑1 (MQ=255)                                                       aCGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCt                                                                                  >  2:58480/1‑149 (MQ=255)                                                           tggtTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGcc                                                                              >  2:292514/1‑149 (MQ=255)                                                             gtTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAg                                                                                                  >  6:211276/1‑127 (MQ=255)                                                               tGCTGGTGTACAGCGCCACCAAATTCTGGTCGGTTATTTTCACTTTGCGGTACAGGCTGTTGATTAACAGCGGCGCCGGCTGGGTGCGGGGAGTGGCCGTACGTTCTGCGTGTTCGAGCGCGATGCGTTAGGCCACATGCTGGCCGTg                                                                           <  2:227527/148‑1 (MQ=255)                                                                gCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTgg                                                                          <  4:103146/148‑1 (MQ=255)                                                                   ggTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTgg                                                                          <  1:53061/145‑1 (MQ=255)                                                                   ggTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTgg                                                                          >  2:53061/1‑145 (MQ=255)                                                                    gtgtACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGcc                                                                     >  2:26977/1‑149 (MQ=255)                                                                    caacccttaccagaatgccgaaatgctgcgcggtttctatttcaccgcggcgctgcaggccgacgaggctcagtggGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGcc                                                                     >  2:2984‑M1/77‑149 (MQ=255)                                                                     aacccttaccagaatgccgaaatgctgcgcggtttctatttcaccgcggcgctgcaggccgacgaggctcagtggGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGccc                                                                    >  1:355921‑M1/76‑149 (MQ=255)                                                                         cAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTGTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACt                                                                >  2:99085/1‑149 (MQ=255)                                                                           gcgcCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGa                                                              <  3:53861/149‑1 (MQ=255)                                                                            cgcCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAg                                                             >  8:262230/1‑149 (MQ=255)                                                                             gcCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGc                                                            <  1:5764/149‑1 (MQ=255)                                                                                 ccaAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTTGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCtcg                                                        >  3:23020/1‑149 (MQ=255)                                                                                       gCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGcc                                                  >  5:122717/1‑149 (MQ=255)                                                                                        cTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCt                                                 <  1:58480/149‑1 (MQ=255)                                                                                           gTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTg                                                >  4:108152/1‑147 (MQ=255)                                                                                                  aTGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCTCACTGAGCCTCGTCGGCCTGCAGcgccgc                                       <  1:26977/149‑1 (MQ=255)                                                                                                   tGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCcgcg                                      <  8:324456/149‑1 (MQ=255)                                                                                                     aTCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGt                                    <  6:122717/149‑1 (MQ=255)                                                                                                     aTCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGt                                    >  1:154317/1‑149 (MQ=255)                                                                                                             gCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACt                                                                <  5:319979/113‑1 (MQ=255)                                                                                                             gCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACt                                                                >  6:319979/1‑113 (MQ=255)                                                                                                                    aGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGAAATAGAAACcgcg                     <  7:262230/149‑1 (MQ=255)                                                                                                                      gCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGAAATAGAAACcgcg                     >  5:203958/1‑147 (MQ=255)                                                                                                                        tGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGAAATAGAAACCGCgcag                  >  6:57495/1‑148 (MQ=255)                                                                                                                         gTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCGCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGAAATAGAAACCGCgcagca                >  3:194065/1‑149 (MQ=255)                                                                                                                         gTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGcgccac                                       >  7:240682/1‑124 (MQ=255)                                                                                                                         gTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGcgccac                                       <  8:240682/126‑3 (MQ=255)                                                                                                                            gatgaACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAGGCGTTCGGCCACCTGCTGGCCGTGGCCGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGATATAGCAACCGCGCCGCGttt             >  8:175103/1‑149 (MQ=255)                                                                                                                            gatgaACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGAAATAGAAACCGCGCAGCAttt             >  7:334240/1‑149 (MQ=255)                                                                                                                             atgaACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGAAATAGAAACCGCGCAGCATTTc            <  2:154317/149‑1 (MQ=255)                                                                                                                              tgaACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGAGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGAAATAGAAACCGCGCATCATTTCg           <  4:119520/149‑1 (MQ=255)                                                                                                                               gaACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGAAATAGAAACCGCGCAGCATTTCgg          >  8:171105/1‑149 (MQ=255)                                                                                                                                  cAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGAAATAGAAACCGCGCAGCATTTCGGCAt       >  5:206037/1‑149 (MQ=255)                                                                                                                                    gcggcgCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGt                                    <  4:185988/118‑1 (MQ=255)                                                                                                                                    gcggcgCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGt                                    >  3:185988/1‑118 (MQ=255)                                                                                                                                     cggcgCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGAAATAGAAACCGCGCAGCATTTCGGCATTCt    >  6:83406/1‑149 (MQ=255)                                                                                                                                      ggcgCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCTGCCTGCAGCGCCGCGGTGAAATAGAAACCGCGCAGCATTTCGGCATTCTg   <  8:334240/149‑1 (MQ=255)                                                                                                                                       gcgcCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGAAATAGAAACCGCGCAGCATTTCGGCATTCTgg  >  4:52904/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                            CACCAGTGCCGCCAGGCCGGCGGCGCCCACCCACCCGGCCTTGCGCCGGCGTTCACGGTGGTTGCTGGTGTACAGCGCCACCAAATGCTGGTCGGGAATGATCACTTTGCGGAACAGGCTGTTGATGAACAGCGGCGCCGGCTGGCTGCCGGCAGTGCCCGTACCTTCTGCGTGTTCGAGCGCGAAGCGTTCGGCCACATGCTGGCCGTGGCAGCCCCACTGAGCCTCGTCGGCCTGCAGCGCCGCGGTGAAATAGAAACCGCGCAGCATTTCGGCATTCTGG  >  NC_002947/3479854‑3480136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.