New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3960868	40 (0.720)	5 (0.090)	5/246	NT	10.5%	coding (156/1074 nt)	PP_3491	enoly‑coenzyme A hydratase/isomerase family protein
	?	NC_002947	= 3960907	47 (0.880)					coding (195/1074 nt)	PP_3491	enoly‑coenzyme A hydratase/isomerase family protein

CACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCATGAAACCTTTTTCGTCGAAGAGTACGCCCTCGACC  >  NC_002947/3960722‑3961016                                                                                                                                                    |                                                                                                                                                     cacGCTCAAACCCCGGCAGCAACAGACCATGTACTCGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGa                                                                                                                                                    <  3:10764/149‑1 (MQ=255)  acGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGa                                                                                                                                                    >  2:328829/1‑148 (MQ=255)  acGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGa                                                                                                                                                    >  2:323624/1‑148 (MQ=255)  acGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGa                                                                                                                                                    >  6:182941/1‑148 (MQ=255)    gCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCttcgc                                                                                                                                                 >  4:2629‑M1/1‑144 (MQ=255)    gCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACaa                                                                                                                                                 <  7:25650/149‑1 (MQ=255)           ccccGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAg                                                                                                                                          <  6:237685/149‑1 (MQ=255)               ggCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTAc                                                                                                                                      <  5:182941/149‑1 (MQ=255)                     aaCAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCg                                                                                                                                >  5:218206/1‑149 (MQ=255)                           ccATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTcc                                                                                                                          >  2:136983/1‑149 (MQ=255)                             aTGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTg                                                                                                                        <  8:227051/149‑1 (MQ=255)                                  cTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGcgcg                                                                                                                    <  1:136983/148‑1 (MQ=255)                                     gCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCgcgg                                                                                                                   >  6:189898/1‑146 (MQ=255)                                     gCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCgcgg                                                                                                                   <  5:189898/146‑1 (MQ=255)                                       cGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCttcgccgcgcaggaccacggcgcgtacctgcggattgtcg                                                                                                              >  5:284656‑M1/1‑109 (MQ=255)                                       cGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTgcgc                                                                                                                     >  3:333753/1‑142 (MQ=255)                                       cGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTgcgc                                                                                                                     <  4:333753/142‑1 (MQ=255)                                       cGAGGTCCGCAACCAGATCGGCCACCGGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACAGGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAg                                                                                                              >  8:141032‑M2/1‑148 (MQ=255)                                          ggTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCttcgccgcgcaggaccacggcgcgtacctgcggattgtcggcc                                                                                                           <  6:284656‑M1/149‑44 (MQ=255)                                               gCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCttcgccgcgcaggaccacggcgcgtacctgcggattgtcggcccactg                                                                                                      <  3:2629‑M1/149‑49 (MQ=255)                                               gCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAg                                                                                                      <  1:328829/149‑1 (MQ=255)                                               gCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAg                                                                                                      <  1:323624/149‑1 (MQ=255)                                               gCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAg                                                                                                      >  3:17242/1‑149 (MQ=255)                                                    cAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGtt                                                                                                 <  3:83812/149‑1 (MQ=255)                                                     aGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCTGGGACATGGTGCGCAGCCTGCGTCAGCACATGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGtt                                                                                                 >  1:273025/1‑149 (MQ=255)                                                      gATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCTGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCt                                                                                               <  4:17242/149‑1 (MQ=255)                                                        tCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCtgt                                                                                             <  2:185043/149‑1 (MQ=255)                                                         cGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCtgtg                                                                                            >  2:101366/1‑149 (MQ=255)                                                                    cccTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGa                                                                                  >  8:110025/1‑148 (MQ=255)                                                                     ccTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGata                                                                                >  1:161712/1‑149 (MQ=255)                                                                          aCCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCCACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCcg                                                                            >  8:66931/1‑148 (MQ=255)                                                                            cGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCcgctc                                                                         <  3:246240/149‑1 (MQ=255)                                                                              cccAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCttcgccgcgcaggaccacggcgcgtacctgcggattgtcggcccact                                                                                                       <  1:185688‑M1/117‑48 (MQ=255)                                                                              cccAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCttcgccgcgcaggaccacggcgcgtacctgcggattgtcggcccact                                                                                                       >  2:185688‑M1/1‑70 (MQ=255)                                                                                     ggTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGAACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGGGCCGGTGGCGATATCCGCTCGCTGTACGa                                                                >  5:320894/1‑149 (MQ=255)                                                                                           aaTGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAAACCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCtt                                                          >  5:216247/1‑149 (MQ=255)                                                                                                   gACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGTTGTACGACAGCTTCAAGGCCg                                                  >  4:319261/1‑149 (MQ=255)                                                                                                       cT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGa                                              >  2:273619/1‑149 (MQ=255)                                                                                                        t‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGa                                              >  3:171146/1‑148 (MQ=255)                                                                                                            aCATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACg                                          <  4:171146/149‑1 (MQ=255)                                                                                                             cATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGc                                         >  3:139761/1‑149 (MQ=255)                                                                                                               tGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTg                                       <  2:161712/149‑1 (MQ=255)                                                                                                                   gcgcAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCAt                                    >  5:159706/1‑148 (MQ=255)                                                                                                                         ccTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCATGAAACCt                             <  7:110025/149‑1 (MQ=255)                                                                                                                             cGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTGCTGTGCCGGTGGCGATACCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCATGAAACCtttt                          <  1:93998/148‑1 (MQ=255)                                                                                                                                 aGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCATGAAACCTTTTtcgtc                     <  1:273619/149‑1 (MQ=255)                                                                                                                                  gCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCATGAAACCTTTTtcgtcg                    <  7:66931/149‑1 (MQ=255)                                                                                                                                    aCCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCATGAAACCTTTTTCGTCGaa                  <  1:101366/149‑1 (MQ=255)                                                                                                                                    aCCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCATGAAACCTTTTTCGTCGaa                  <  4:139761/149‑1 (MQ=255)                                                                                                                                    aCCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTACTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCATGAAACCTTATTCGTCGaa                  >  7:301308/1‑149 (MQ=255)                                                                                                                                            cAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAggcccactggtccaggtgctgacgcaggctgcgcaccatgtccagggtcagggcattgagaccggctgggcggttcagggtcaggtggccgatctggttgc          <  3:2629‑M2/149‑102 (MQ=255)                                                                                                                                             aGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAggcccactggtccaggtgctgacgcaggctgcgcaccatgtccagggtcagggcattgagaccggctggg                                         >  2:185688‑M2/1‑47 (MQ=255)                                                                                                                                             aGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAggcccactggtccaggtgctgacgcaggctgcgcaccatgtccagggtcagggcattgagaccggctggg                                         <  1:185688‑M2/117‑71 (MQ=255)                                                                                                                                              gTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGAGCGGCGAAGGCCCCAAGTGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACTACAGCTTCAAGGCCGGCGACACGCTGCTTGAAACCTTTTtcgg                      >  8:147591/1‑134 (MQ=255)                                                                                                                                               tGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCATGAAACCTTTTTCGTCGAAGAGTACGCCCt       >  7:28466/1‑149 (MQ=255)                                                                                                                                                 ggCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAggcccactggtccaggtgctgacgcaggctgcgcaccatgtccagggtcagggcattgagaccggctgggcggttcagggtcaggtggccgatctggttgcggacc     <  6:284656‑M2/149‑107 (MQ=255)                                                                                                                                                  gCCGACAATCCGCAGGTACGCGCCGT‑GTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCACTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCa                                     <  6:353443/115‑1 (MQ=255)                                                                                                                                                  gCCGACAATCCGCAGGTACGCGCCGT‑GTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCACTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCa                                     >  5:353443/1‑115 (MQ=255)                                                                                                                                                   ccGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCATGAAACCTTTTTCGTCGAAGAGTACGCCCTCGAc   <  2:273025/149‑1 (MQ=255)                                                                                                                                                    cttcgccgcgcaggaccacggcgcgtacctgcggattgtcggcccactggtccaggtgctgacgcaggctgcgcaccctgtccagggtcagggcattgagaccggctgggcggttcagggtccggtggccgatctggttgcggacctcg  >  8:141032‑M1/1‑1 (MQ=255)                                                                                                                                                    cGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAggcccactggtccaggtgctgacgcaggctgcgcaccatgtccagggtcagggcattgagaccggctgggcggttcagggtcaggtggccgatctggttgcggacctcg  >  5:284656‑M2/1‑40 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCGGTCTCAATGCCCTGACCCT‑GGACATGGTGCGCAGCCTGCGTCAGCACCTGGACCAGTGGGCCGACAATCCGCAGGTACGCGCCGTGGTCCTGCGCGGCGAAGGCCCCAAGGGGTTCTGTGCCGGTGGCGATATCCGCTCGCTGTACGACAGCTTCAAGGCCGGCGACACGCTGCATGAAACCTTTTTCGTCGAAGAGTACGCCCTCGACC  >  NC_002947/3960722‑3961016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.