New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4401180	53 (0.960)	3 (0.060)	3/242	NT	5.5%	coding (169/189 nt)	PP_3880	hypothetical protein
	?	NC_002947	= 4401221	54 (1.030)					coding (128/189 nt)	PP_3880	hypothetical protein

GCGCTGTCTGGTGTGACCGTTACTCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAGGCCGAAGCCAACCAGCCCGGCAACCCACGCA  >  NC_002947/4401033‑4401328                                                                                                                                                    |                                                                                                                                                     gcgcTGTCTGGTGTGACCGTTACTCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGt                                                                                                                                                     <  2:279398/149‑1 (MQ=255) gcgcTGTCTGGTGTGACCGTTACTCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGt                                                                                                                                                     <  3:137016/149‑1 (MQ=255)   gcTGTCTGGTGTGACCGTTACTCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGttt                                                                                                                                                   <  4:280059/149‑1 (MQ=255)   gcTGTCTGGTGTGACCGTTACTCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGttt                                                                                                                                                   <  3:178867/149‑1 (MQ=255)      gTCTGGTGTGACCGTTACTCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTgag                                                                                                                                                <  5:275510/149‑1 (MQ=255)              tgACCGTTACTCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTc                                                                                                                                        >  4:322681/1‑149 (MQ=255)              tgACCGTTACTCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTc                                                                                                                                        <  4:115641/149‑1 (MQ=255)                aCCGTTACTCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCg                                                                                                                                       <  1:105414/148‑1 (MQ=255)                   gTTACTCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCt                                                                                                                                   >  2:297830/1‑149 (MQ=255)                        tCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTga                                                                                                                                                 <  5:102556/130‑1 (MQ=255)                        tCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTga                                                                                                                                                 >  6:102556/1‑130 (MQ=255)                        tCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGc                                                                                                                              >  4:140635/1‑149 (MQ=255)                              tgctgAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTc                                                                                                                        >  7:125526/1‑149 (MQ=255)                              tgctgAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCAGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTc                                                                                                                        >  6:108903/1‑149 (MQ=255)                                   aGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGgc                                                                                                                     >  6:208789/1‑147 (MQ=255)                                        cTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGcttggctggccgacaaagccgcagcccgagtacctctca                                                                                                               >  7:199558‑M1/1‑109 (MQ=255)                                        cTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGgccagccag                                                                                                              <  5:208789/149‑2 (MQ=255)                                        cTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCaa                                                                                                              <  3:322681/149‑1 (MQ=255)                                           gcccctaCCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGcttggctggccgacaaagccgcagcccgagtacctctcaaa                                                                                                             <  8:199558‑M1/145‑42 (MQ=255)                                           gACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGc                                                                                                            >  4:336946‑M2/1‑147 (MQ=255)                                              ccTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGcccag                                                                                                        >  3:32887‑M2/1‑144 (MQ=255)                                              ccTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGG                                                                                                                                                      <  5:14213‑M1/103‑1 (MQ=255)                                              ccTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGG                                                                                                                                                      >  6:14213‑M1/1‑103 (MQ=255)                                                tACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGcccagcc                                                                                                      <  3:184315‑M2/149‑8 (MQ=255)                                                  ccccGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGcttggctggccgacaaagccgcagcccgagtacctctcaaacccagccc                                                                                                     <  3:155180‑M1/148‑50 (MQ=255)                                                  ccccGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGa                                                                                                    >  4:69267/1‑149 (MQ=255)                                                   cccGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGAt                                                                                                   >  6:368442/1‑149 (MQ=255)                                                    ccGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGcccagc                                                                                                       >  5:148579‑M2/1‑138 (MQ=255)                                                    ccGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGcccagc                                                                                                       <  6:148579‑M2/144‑7 (MQ=255)                                                    ccGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGAt                                                                                                   >  8:130118/1‑148 (MQ=255)                                                    ccGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATc                                                                                                  <  7:130118/149‑1 (MQ=255)                                                    ccGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTACATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATc                                                                                                  <  1:297830/149‑1 (MQ=255)                                                     cgcgCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGc                                                                                                                              >  4:110428/1‑120 (MQ=255)                                                     cgcgCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGc                                                                                                                              <  3:110428/120‑1 (MQ=255)                                                       cgccgcCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACCAAATCAGCCTCCTTCTGGGCTGTGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAgg                                                                                               <  5:210086/149‑1 (MQ=255)                                                          cgccAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGccc                                                                                            <  3:69267/149‑1 (MQ=255)                                                          cgccAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGcc                                                                                             >  4:207665/1‑148 (MQ=255)                                                            ccAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCaa                                                                                          <  4:184315/149‑1 (MQ=255)                                                             cAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAAt                                                                                         >  2:326285/1‑149 (MQ=255)                                                                      ctGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAg                                                                                  <  5:368442/147‑1 (MQ=255)                                                                          cgccATCCGAACCCAGCCCTTCATTGCCGCCAACAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGa                                                                            <  6:17517/149‑1 (MQ=255)                                                                            ccATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAgc                                                                          <  5:108903/149‑1 (MQ=255)                                                                            ccATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAgc                                                                          >  3:216423/1‑149 (MQ=255)                                                                                   aaaCCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCgg                                                                   >  8:107746/1‑149 (MQ=255)                                                                                     aCCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCggg                                                                  >  7:267868/1‑148 (MQ=255)                                                                                       cAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGca                                                                >  5:264130/1‑148 (MQ=255)                                                                                           ccTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATgg                                                           <  2:221702/149‑1 (MQ=255)                                                                                                   gccgccAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGTCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAggg                                                    <  1:326285/148‑1 (MQ=255)                                                                                                    ccgccAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGc                                                   <  3:207665/148‑1 (MQ=255)                                                                                                    ccgccAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGc                                                   <  8:125526/148‑1 (MQ=255)                                                                                                        cAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATcc                                              >  8:317630/1‑149 (MQ=255)                                                                                                          agaagaTTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCg                                            >  5:15154/1‑149 (MQ=255)                                                                                                           gaagaTTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCATGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAggg                                                    >  7:190660/1‑140 (MQ=255)                                                                                                           gaagaTTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCgg                                           <  6:264130/149‑1 (MQ=255)                                                                                                           gaagaTTGCTGAAGAACATAATAAGCCTCCTTGTGGGCTGGGTTTGAGATGTACTCGGGCTGCGGCTTTGTCGGCCATCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGAACATGGATCAggt                                                    <  8:190660/140‑2 (MQ=255)                                                                                                             agaTTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGc                                          <  6:15154/148‑1 (MQ=255)                                                                                                               aTTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGAc                                       >  3:210929/1‑149 (MQ=255)                                                                                                                    tGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACcag                                    >  7:152180/1‑147 (MQ=255)                                                                                                                      aagaaCATAATCAGCCTCCTTCTGGTCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCCGCAGAAATGAGCGCAGCGGCCACATGGATCAGGGCGATACCCGCGACCAGCAgg                                >  3:225926/1‑149 (MQ=255)                                                                                                                      aagaaCATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAgg                                >  5:124314/1‑149 (MQ=255)                                                                                                                           cATAATCTGCCTGCTTCTGGGCTGGGTTTGAGAGGTACTCGGTCTGCGGCTTTGGCGGCCAGCGAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAGGCCGaa                           <  4:225926/149‑1 (MQ=255)                                                                                                                           cATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAGGCCg                             >  6:44242/1‑147 (MQ=255)                                                                                                                           cATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAGGCCGaa                           <  7:107746/149‑1 (MQ=255)                                                                                                                            aTAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAGGCCGAAg                          >  4:41854/1‑149 (MQ=255)                                                                                                                              aaTCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAGGCCGAAGcc                        >  4:64199/1‑149 (MQ=255)                                                                                                                                tCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAGGCCGAAGCCaa                      >  1:260904/1‑149 (MQ=255)                                                                                                                                    cctcctTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAGGCCGAAGCCAACCAg                  >  2:221345/1‑149 (MQ=255)                                                                                                                                      tactTCTGCGCTGCGATTGAGAGCTACTCGGGCTGCGGATTTCTCGGCCAGCCAACAACAGCCCATAAGGACCAATCCGCCAGAAAAGAGCGCAGCGCGCACATCGATCAAGGCGATCCCGGCGAACAGCAGGCCGAAGCCAACCAGcc                >  8:112103/3‑149 (MQ=255)                                                                                                                                        ctTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAGGCCGAAGCCAACCAGCCCg              <  4:210929/149‑1 (MQ=255)                                                                                                                                             gggctgggTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGcccagcccagaaggaggctgattatgttcttcagcaatcttcttggcggcaatgaagggctggtttcggatggcggcagtagtttttggcggcgcgggg          <  3:155180‑M2/148‑100 (MQ=255)                                                                                                                                              ggctgggcttggctggccgacaaagccgcagcccgagtacctctcaaacccagcccagaaggaggctgattatgttcttcagcaatcttcttggcggcaatgaagggctggtttcggatggcggcagtagtttttggcggcgcggggta        <  3:184315‑M1/149‑143 (MQ=255)                                                                                                                                               gctgggcttggctggccgacaaagccgcagcccgagtacctctcaaacccagcccagaaggaggctgattatgttcttcagcaatcttcttggcggcaatgaagggctggtttcggatggcggcagtagtttttggcggcgcgg            >  5:148579‑M1/1‑6 (MQ=255)                                                                                                                                               gctgggcttggctggccgacaaagccgcagcccgagtacctctcaaacccagcccagaaggaggctgattatgttcttcagcaatcttcttggcggcaatgaagggctggtttcggatggcggcagtagtttttggcggcgcgg            <  6:148579‑M1/144‑139 (MQ=255)                                                                                                                                                ctgggcttggctggccgacaaagccgcagcccgagtacctctcaaacccagcccagaaggaggctgattatgttcttcagcaatcttcttggcggcaatgaagggctggtttcggatggcggcagtagtttttggcggcgcggggtagg      >  3:32887‑M1/1‑5 (MQ=255)                                                                                                                                                ctgggTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAGGCCGAAGCCAACCAGCCCGGCAACCCa      >  6:291857/1‑149 (MQ=255)                                                                                                                                                ctgggTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAGGCCGAAGCCAACCAGCCCGGCAACCCa      <  3:41854/149‑1 (MQ=255)                                                                                                                                                    gcttggctggccgacaaagccgcagcccgagtacctctcaaacccagcccagaaggaggctgattatgttcttcagcaatcttcttggcggcaatgaagggctggtttcggatggcggcagtagtttttggcggcgcggggtagggtc   >  4:336946‑M1/1‑1 (MQ=255)                                                                                                                                                    gTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAgc                                                                          <  5:351614/77‑1 (MQ=255)                                                                                                                                                    gTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAgc                                                                          >  6:351614/1‑77 (MQ=255)                                                                                                                                                    gTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAGGCCGAAGCCAACCAGCCCGGCAACCCACGCa  <  4:216423/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GCGCTGTCTGGTGTGACCGTTACTCCGGCTGCTGAGCGGCTAGACCCTACCCCGCGCCGCCAAAAACTACTGCCGCCATCCGAAACCAGCCCTTCATTGCCGCCAAGAAGATTGCTGAAGAACATAATCAGCCTCCTTCTGGGCTGGGTTTGAGAGGTACTCGGGCTGCGGCTTTGTCGGCCAGCCAAGCCCAGCCGATCAGGCCCAATCCGGCAGAAATGAGCGCAGCGGGCACATGGATCAGGGCGATCCCGGCGACCAGCAGGCCGAAGCCAACCAGCCCGGCAACCCACGCA  >  NC_002947/4401033‑4401328

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.