New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4712124 =	45 (0.810)	3 (0.060)	3/244	NT	6.7%	coding (356/2115 nt)	PP_4171	hypothetical protein
	?	NC_002947	4712160 =	41 (0.780)					coding (392/2115 nt)	PP_4171	hypothetical protein

TCCCCGAACTGCTGCGCCTGGTACCGGGCATGATGATCGGCTACGGTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGC  >  NC_002947/4711977‑4712262                                                                                                                                                    |                                                                                                                                           cgtcctggccgcgtgtcactttcagccgcgtaccatggctgtcggcgggtttgcgggtgaggatgttgaccaccgccatcagcgcgttggcgccatagctgacggtattcgggccacgaaacacctcgatgcgctcgatatcctccaTg                                                                                                                                           <  4:154084‑M1/2‑1 (MQ=255) cgtcctggccgcgtgtcactttcagccgcgtaccatggctgtcggcgggtttgcgggggaggatgttgaccaccgccatcagcgcgttggcgccatagctgacggtattcgggccacgaaacacctcgatgcgctcgatatcctccaTg                                                                                                                                           >  6:216774‑M1/148‑149 (MQ=255)   cccGAACTGCTGCGCCTGGTACCGGGCATGATGATCGGCTACGGTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTgg                                                                                                                                          <  1:96683/148‑1 (MQ=255)            ctgcGCCTGGTACCGGGCATGATGATCGGCTACGGTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTg                                                                                                                                  <  8:135615/147‑1 (MQ=255)                 ccTGGTACCGGGCATGATGATCGGCTACGGTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGa                                                                                                                           <  5:363214/149‑1 (MQ=255)                     gTACCGGGCATGATGATCGGCTACGGTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGc                                                                                                                         <  4:191001/147‑1 (MQ=255)                     gTACCGGGCATGATGATCGGCTACGGTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGc                                                                                                                         <  1:236286/147‑1 (MQ=255)                     gTACCGGGCATGATGATCGGCTACGGTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGa                                                                                                                       >  5:271741/1‑149 (MQ=255)                      tACCGGGCATGATGATCGGCTACGGTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGAc                                                                                                                      <  6:271741/149‑1 (MQ=255)                         cGGGCATGATGATCGGCTACGGTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCCCGGTGGACTGGAGCGAc                                                                                                                      >  8:259682/1‑146 (MQ=255)                         cGGGCATGATGATCGGCTACGGTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGAc                                                                                                                      <  7:259682/146‑1 (MQ=255)                         cGGGCATGATGATCGGCTACGGTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATc                                                                                                                   >  1:56649/1‑149 (MQ=255)                                      gctgtcggcgggtttgcgggtgaggatgttgaccaccgccatcagcgcgttggcgccatagctgacggtattcgggccacgaaacacctcgatgcgctcgatatcctccaTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATgg                                                                                                      >  1:72473‑M1/111‑149 (MQ=255)                                            cGGTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGata                                                                                                <  6:111529/149‑1 (MQ=255)                                             ggTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGatat                                                                                               <  3:320865/149‑1 (MQ=255)                                                    gTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGa                                                                                            >  3:218490/1‑145 (MQ=255)                                                    gTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGa                                                                                            <  4:218490/145‑1 (MQ=255)                                                       aTCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATc                                                                                     >  5:69792/1‑149 (MQ=255)                                                               aCGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGtt                                                                             >  8:4783/1‑149 (MQ=255)                                                                 ggTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTc                                                                           >  6:244605/1‑149 (MQ=255)                                                                         aCCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGccc                                                                    >  2:72917/1‑148 (MQ=255)                                                                          ccACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATGGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCg                                                                   >  1:251913/1‑148 (MQ=255)                                                                           cACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGaa                                                                 <  5:244605/149‑1 (MQ=255)                                                                            aCGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAgcgc                                                                                        >  4:233541/1‑125 (MQ=255)                                                                            aCGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAgcgc                                                                                        <  3:233541/125‑1 (MQ=255)                                                                             cGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATa                                                               <  6:69792/149‑1 (MQ=255)                                                                               tcagcgcgttggcgccatagctgacggtattcgggccacgaaacacctcgatgcgctcgatatcctccaTGGCCACGGTGGACTGGAGCGACATCCCCTTGGcc                                                                                                          <  2:132566‑M1/35‑1 (MQ=255)                                                                               tcagcgcgttggcgccatagctgacggtattcgggccacgaaacacctcgatgcgctcgatatcctccaTGGCCACGGTGGACTGGAGCGACATCCCCTTGGcc                                                                                                          >  1:132566‑M1/70‑104 (MQ=255)                                                                                cagcaACGTCAACGACGCACGGCCCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCAACGAGGTGTTTCGTGGCCCGAATACCg                                                            >  6:291170/1‑149 (MQ=255)                                                                                  gcaACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTc                                                          <  2:251913/149‑1 (MQ=255)                                                                                    aaCGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCa                                                                                       <  4:108572/118‑1 (MQ=255)                                                                                    aaCGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCa                                                                                       >  3:108572/1‑118 (MQ=255)                                                                                                gaaCGGCGCATGAAGGTATTGATCGATCGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCACCTTGGCCATGTAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAAAACCGACAGCAATGGCGCCaa                                            >  6:195425/3‑149 (MQ=255)                                                                                                  aCGGCGCATGGAGGTATTGATCGATGGCCGCTCGTTATACCGCGCAGGCCTGGCCACGGTGGTCTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAAcg                                          <  5:195425/149‑1 (MQ=255)                                                                                                  aCGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTg                                                                                                                             >  4:125072/1‑66 (MQ=255)                                                                                                  aCGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTg                                                                                                                             <  3:125072/66‑1 (MQ=255)                                                                                                         aTGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGAt                                   <  7:4783/149‑1 (MQ=255)                                                                                                           gCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATgg                                 >  7:21536/1‑149 (MQ=255)                                                                                                             aGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCg                               >  4:333446/1‑149 (MQ=255)                                                                                                                       cGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGCGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAAc                      >  2:107403/1‑148 (MQ=255)                                                                                                                       cGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACa                     >  1:150271/1‑149 (MQ=255)                                                                                                                         aTGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAAc                      >  7:81041/1‑146 (MQ=255)                                                                                                                         aTGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAAc                      <  8:81041/146‑1 (MQ=255)                                                                                                                           ggCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCaa                                            <  7:247845/122‑1 (MQ=255)                                                                                                                           ggCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCaa                                            >  8:247845/1‑122 (MQ=255)                                                                                                                            gCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGTAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCAACGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCt                 <  5:291170/148‑1 (MQ=255)                                                                                                                            gCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTc                <  2:56649/149‑1 (MQ=255)                                                                                                                            gCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTc                <  1:72917/149‑1 (MQ=255)                                                                                                                                       taCCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACa                     <  2:197591/133‑1 (MQ=255)                                                                                                                                       taCCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACa                     >  1:197591/1‑133 (MQ=255)                                                                                                                                          cgcgCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACccgc  <  2:150271/149‑1 (MQ=255)                                                                                                                                               aGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAg                                                                                           >  4:189894/1‑55 (MQ=255)                                                                                                                                               aGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAg                                                                                           <  3:189894/55‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                           TCCCCGAACTGCTGCGCCTGGTACCGGGCATGATGATCGGCTACGGTGCCGGTAATCAACCCACGGTCAACTACCACGGCAGCAACGTCAACGACGCACGGCGCATGCAGGTATTGATCGATGGCCGCTCGGTATACCGCGCAGGCCTGGCCACGGTGGACTGGAGCGACATCCCCTTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGC  >  NC_002947/4711977‑4712262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.