New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5134678	30 (0.540)	3 (0.060)	3/246	NT	10.2%	coding (262/600 nt)	PP_4520	hypothetical protein
	?	NC_002947	= 5134729	24 (0.450)					coding (211/600 nt)	PP_4520	hypothetical protein

ACCTGCCCCAGCGTCACCCGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGT  >  NC_002947/5134539‑5134825                                                                                                                                            |                                                                                                                                                     aCCTGCCCCAGCGTCACCCGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGt‑cat                                                                                                                                             >  5:322031/1‑148 (MQ=255) aCCTGCCCCAGCGTCACCCGTGGCAGCCCCCACAGCAACGGGTTCAGCTACAGCAGCTTGCTCCCCTTGCCCCAGGTGCCGTCGGTCAAGATCAGCACCAAAGGATTGTCGCCAGCCACGCCATACGCTGTCAGCACCTGGGCGt‑cat                                                                                                                                             >  4:218817/1‑148 (MQ=255)      ccccAGCGTCACCCGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCg                                                                                                                                       <  1:335066/149‑1 (MQ=255)              tCACCCGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAAcagc                                                                                                                               <  8:184876/149‑1 (MQ=255)              tCACCCGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCACCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAAcag                                                                                                                                >  2:314385/1‑148 (MQ=255)                       gCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTTCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCgg                                                                                                                       <  3:218817/148‑1 (MQ=255)                         aGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGggtg                                                                                                                    <  1:327246/149‑1 (MQ=255)                             cccccAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATAAGCAGCAAAGGTTTTTCGCCCGCATAGCCATAAGATGTCAGCACCTGGTCGT‑CATCACACGTGCACAGCAGCCCCGGGTGGTa                                                                                                                 >  8:326670/1‑148 (MQ=255)                                 cAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGctcgccacccccggataccacccggtgctgctgttcccggg                                                                                                             >  4:119626‑M1/1‑108 (MQ=255)                                  aGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCggg                                                                                                           <  3:234487/149‑1 (MQ=255)                                        gggTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGc                                                                                                     >  3:16866/1‑149 (MQ=255)                                            tCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAg                                                                                                  >  2:170109/1‑148 (MQ=255)                                             cAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGc                                                                                                     <  8:48505/144‑1 (MQ=255)                                             cAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGc                                                                                                     >  7:48505/1‑144 (MQ=255)                                                 tACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGctcgccacccccggataccacccggtgctgctgttcccgggtgatgacgcccaggtg                                                                                             <  7:49140‑M1/149‑58 (MQ=255)                                                   cagcagCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGctcgccacccccggataccacccggtgctgctgttcccgggtgatgacgcccaggtgc                                                                                            <  3:119626‑M1/148‑59 (MQ=255)                                                   cagcagCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcat                                                                                          >  4:8995/1‑149 (MQ=255)                                                   cagcagCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcat                                                                                          <  6:322031/149‑1 (MQ=255)                                                      cagcTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcatgca                                                                                       <  3:344015/149‑1 (MQ=255)                                                             cgcgcCTTGCGCCAGGTGCCGTCGGGCACGATCAGTAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATc                                                                                <  5:66281/149‑1 (MQ=255)                                                                  cTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGTCGT‑CATCACCCGGGCACAGCAGCACCGGCTGGTATCCGGGGGTGGCGAGCAGGTAATGCACGTCATCGAacc                                                                           >  8:307845/1‑148 (MQ=255)                                                                  cTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAaca                                                                           <  3:8995/149‑1 (MQ=255)                                                                            gTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCCATCACCCGGGAACAGCAGCACCGGGTGGTATCCgggg                                                                                                          <  1:244896/109‑1 (MQ=255)                                                                            gTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCgggg                                                                                                          >  2:244896/1‑108 (MQ=255)                                                                             tGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATc                                                                <  1:170109/149‑1 (MQ=255)                                                                                               gcagcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGtt                                               >  6:201185/1‑148 (MQ=255)                                                                                                cagcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGtt                                               >  4:330051/1‑147 (MQ=255)                                                                                                         tttGTCGCCCTCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCAGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAgg                                     <  5:201185/148‑1 (MQ=255)                                                                                                             tCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGAGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGc                                <  7:326670/149‑1 (MQ=255)                                                                                                               gcccgccTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGc                                >  8:25166/1‑147 (MQ=255)                                                                                                                        gCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGcc                      <  1:314385/148‑1 (MQ=255)                                                                                                                          cATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCgtg                   <  3:330051/149‑1 (MQ=255)                                                                                                                                  gTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAggg            >  7:78477/1‑148 (MQ=255)                                                                                                                                      gCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGcaggtgctgacagcttatggcgaggcgggcgacaaacctttgctgctgatcgtgcccgacggcacctggcgcaaggcgcgcaagctgctg        <  3:119626‑M2/148‑91 (MQ=255)                                                                                                                                       cACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGcaggtgctgacagcttatggcgaggcgggcgacaaacctttgctgctgatcgtgcccgacggcacctggcgcaaggcgcgcaagctgctgta      <  7:49140‑M2/149‑93 (MQ=255)                                                                                                                                           tGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGt  >  5:223448/1‑149 (MQ=255)                                                                                                                                            |                                                                                                                                                     ACCTGCCCCAGCGTCACCCGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGT‑CATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGT  >  NC_002947/5134539‑5134825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.