New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5134678	30 (0.540)	3 (0.060)	3/246	NT	10.2%	coding (262/600 nt)	PP_4520	hypothetical protein
	?	NC_002947	= 5134729	24 (0.450)					coding (211/600 nt)	PP_4520	hypothetical protein

TCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGTTTCACTGGGGTGCTGCAGCAGGATCACACGGGTGCGG  >  NC_002947/5134582‑5134862                                                                                                                                                    |                                                                                                                                      tCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAg                                                                                                                                       >  2:170109/1‑148 (MQ=255)        cagcagCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcat                                                                                                                               <  6:322031/149‑1 (MQ=255)        cagcagCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcat                                                                                                                               >  4:8995/1‑149 (MQ=255)           cagcTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcatgca                                                                                                                            <  3:344015/149‑1 (MQ=255)                  cgcgcCTTGCGCCAGGTGCCGTCGGGCACGATCAGTAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATc                                                                                                                     <  5:66281/149‑1 (MQ=255)                       cTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGTCGTCATCACCCGGGCACAGCAGCACCGGCTGGTATCCGGGGGTGGCGAGCAGGTAATGCACGTCATCGAacc                                                                                                                >  8:307845/1‑148 (MQ=255)                       cTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAaca                                                                                                                <  3:8995/149‑1 (MQ=255)                                  tGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATc                                                                                                     <  1:170109/149‑1 (MQ=255)                                                    gcagcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGtt                                                                                    >  6:201185/1‑148 (MQ=255)                                                     cagcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGtt                                                                                    >  4:330051/1‑147 (MQ=255)                                                              tttGTCGCCCTCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCAGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAgg                                                                          <  5:201185/148‑1 (MQ=255)                                                                  tCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGAGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGc                                                                     <  7:326670/149‑1 (MQ=255)                                                                    gcccgccTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGc                                                                     >  8:25166/1‑147 (MQ=255)                                                                             gCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGcc                                                           <  1:314385/148‑1 (MQ=255)                                                                               cATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCgtg                                                        <  3:330051/149‑1 (MQ=255)                                                                                       gTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAggg                                                 >  7:78477/1‑148 (MQ=255)                                                                                           gCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGcaggtgctgacagcttatggcgaggcgggcgacaaacctttgctgctgatcgtgcccgacggcacctggcgcaaggcgcgcaagctgctg                                             <  3:119626‑M2/148‑91 (MQ=255)                                                                                            cACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGcaggtgctgacagcttatggcgaggcgggcgacaaacctttgctgctgatcgtgcccgacggcacctggcgcaaggcgcgcaagctgctgta                                           <  7:49140‑M2/149‑93 (MQ=255)                                                                                                tGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGt                                       >  5:223448/1‑149 (MQ=255)                                                                                                  ggCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGt                                       <  8:78477/147‑1 (MQ=255)                                                                                                        atcaCCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGTTTCACTg                                <  5:141015/148‑1 (MQ=255)                                                                                                            cccGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGcaggtgctgacagcttatggcgaggcgggcgacaaacctttgctgctgatcgtgcccgacggcacctggcgcaaggcgcgcaagctgctgtacctgaacccgttgctg                           >  4:119626‑M2/1‑41 (MQ=255)                                                                                                            cccGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGgcgcgc                                                            >  7:247309/1‑116 (MQ=255)                                                                                                            cccGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGgcgcgc                                                            <  8:247309/116‑1 (MQ=255)                                                                                                             ccGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGTTTCACTGGGGtgc                          >  2:131075/1‑149 (MQ=255)                                                                                                             ccGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGTTTCACTGGGGtgc                          >  8:50148/1‑149 (MQ=255)                                                                                                                ggAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGTTTCACTGGGGtgctgc                       <  7:50148/149‑1 (MQ=255)                                                                                                                               ggtggtATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGTTTCACTGGGGTGCTGCAGCAGGATCACACgg        <  6:223448/149‑1 (MQ=255)                                                                                                                                         gggggTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGTTTCACTGGGGTGCTGCAGCAGGATCACACGGGTGCgg  >  2:174631/1‑145 (MQ=255)                                                                                                                                         gggggTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGTTTCACTGGGGTGCTGCAGCAGGATCACACGGGTGCgg  <  1:174631/145‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                      TCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGTTTCACTGGGGTGCTGCAGCAGGATCACACGGGTGCGG  >  NC_002947/5134582‑5134862

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.