New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5502917	54 (0.980)	3 (0.060)	3/236	NT	5.1%	coding (365/432 nt)	PP_4837	hypothetical protein
	?	NC_002947	= 5502938	61 (1.200)					coding (386/432 nt)	PP_4837	hypothetical protein

GCGGCGATGGCCAGTTGCATGTGATGTGGGAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGACTGGAATCATTATGTCCGGCTGCAC  >  NC_002947/5502770‑5503064                                                                                                                                                     |                                                                                                                                                    gcggcgATGGCCAGTTGCATGTGATGTGGGAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGc                                                                                                                                                    <  3:140378/149‑1 (MQ=255)       aTGGCCAGTTGCATGTGATGTGGGAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGcc                                                                                                                                              <  8:202039/149‑1 (MQ=255)                         tgtgGGAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCCCCTGCTTGCGCCAACGCACCCGGGCCATGCCCGGCAGGCTGTATTccct                                                                                                                            <  2:65589‑M2/149‑5 (MQ=255)                         tgtgGGAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAg                                                                                                                                        >  5:160728/1‑137 (MQ=255)                         tgtgGGAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAg                                                                                                                                        <  6:160728/137‑1 (MQ=255)                           tgGGAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTccctg                                                                                                                           >  2:59183‑M2/1‑143 (MQ=255)                             ggAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTccctggtg                                                                                                                        <  3:256429‑M2/149‑9 (MQ=255)                             ggAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCACAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTccctggtg                                                                                                                        <  1:84395‑M2/149‑9 (MQ=255)                              gAAAAGTGTGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGaatacagcctgccgggcatggccctggtgc                                                                                                                       <  4:73825‑M1/149‑31 (MQ=255)                                aaaGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTgcgc                                                                                                                     <  4:110950/149‑1 (MQ=255)                                      cGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGcc                                                                                                               >  3:319990/1‑149 (MQ=255)                                        gTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCcgc                                                                                                             >  5:137030/1‑149 (MQ=255)                                           aCTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAgg                                                                                                                                       <  8:115777/120‑1 (MQ=255)                                           aCTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAgg                                                                                                                                       >  7:115777/1‑120 (MQ=255)                                           aCTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGcc                                                                                                          >  1:104060/1‑149 (MQ=255)                                                     gttgttCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCCCCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCcttctt                                                                                                >  6:370714/1‑149 (MQ=255)                                                      ttgttCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCcttct                                                                                                 <  3:35814/147‑1 (MQ=255)                                                      ttgttCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCttcttc                                                                                               <  2:359393/149‑1 (MQ=255)                                                      ttgttCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCttcttc                                                                                               <  6:102751/149‑1 (MQ=255)                                                       tgttCAACTGTCCGGCCGTGCCCCAGGCCCTCAGCCCGA‑TCAGCGCCGGCAGCATCGCACGCACCTCCCAGCTGCTTGCGCCAACGCACCAGGGCCTTGGCCGGCAGTCTTTATTGCCTGGTGCTTGCAGCCGCGCCCGGCCttcttc                                                                                               <  4:95036/148‑1 (MQ=255)                                                         ttCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGAt                                                                                            >  6:306567/1‑149 (MQ=255)                                                          tCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGAt                                                                                            >  3:286165/1‑148 (MQ=255)                                                            aaCTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGGATTCCCTGGTGCGCGCAGCCGCGCCCCGCCGTCTTCGATCaa                                                                                         >  7:175472/1‑149 (MQ=255)                                                              cTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACg                                                                                       >  1:56778/1‑149 (MQ=255)                                                               tGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTGTTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCACCGt                                                                                      >  5:349007/1‑149 (MQ=255)                                                                 cccGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCCCCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCt                                                                                    >  5:33446/1‑149 (MQ=255)                                                                 cccGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCTCCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGt                                                                                      <  6:235051/147‑1 (MQ=255)                                                                 cccGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCt                                                                                    >  1:336582/1‑149 (MQ=255)                                                                  ccGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGtat                                                                                    >  5:172792/1‑146 (MQ=255)                                                                    ggCCCTGCCCCAGGCCCTCAGCCCGCGTCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTg                                                                                   >  1:5127/1‑148 (MQ=255)                                                                     gCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGaaa                                                                                <  4:319990/149‑1 (MQ=255)                                                                      cccTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAaac                                                                               <  2:104060/149‑1 (MQ=255)                                                                        cTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAaacaa                                                                             <  7:318592/149‑1 (MQ=255)                                                                              cAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCgcgc                                                                                                           >  1:81032/1‑113 (MQ=255)                                                                              cAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCgcgc                                                                                                           <  2:81032/113‑1 (MQ=255)                                                                               aGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTg                                                                      <  4:256429/149‑1 (MQ=255)                                                                                ggCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCTACGTCTGAAACAACATTTTgc                                                                     <  7:229313/149‑1 (MQ=255)                                                                                ggCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTgc                                                                     <  2:5127/149‑1 (MQ=255)                                                                                   ccTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGaatacagcctgccgggcatggccctggtg                                                                                                                        <  1:219247‑M1/95‑30 (MQ=255)                                                                                   ccTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGaatacagcctgccgggcatggccctggtg                                                                                                                        >  2:219247‑M1/1‑66 (MQ=255)                                                                                       aGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACg                                                                >  6:69678/1‑147 (MQ=255)                                                                                       aGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGaa                                                              <  2:336582/149‑1 (MQ=255)                                                                                       aGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAACCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACg                                                                >  7:338744/1‑147 (MQ=255)                                                                                                 aGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCaggagg                                                     >  7:27846/1‑149 (MQ=255)                                                                                                       ggCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTcgc                                               <  6:33446/149‑1 (MQ=255)                                                                                                       ggCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTcgc                                               <  6:137030/149‑1 (MQ=255)                                                                                                       ggCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAACCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTcgc                                               <  8:338744/149‑1 (MQ=255)                                                                                                        gcagcaTCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTcgcg                                              <  2:84395/149‑1 (MQ=255)                                                                                                             aTCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGaaa                                                                                <  4:185233/110‑1 (MQ=255)                                                                                                             aTCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGaaa                                                                                >  3:185233/1‑110 (MQ=255)                                                                                                                gCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTc                                       <  5:306567/148‑1 (MQ=255)                                                                                                                 cccccACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTGTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCAt                                     <  6:172792/149‑1 (MQ=255)                                                                                                                     caccacCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACt                                 >  3:150140/1‑149 (MQ=255)                                                                                                                            caccTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTGTTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGAc                          <  6:349007/149‑1 (MQ=255)                                                                                                                              ccTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGACTg                        >  4:158191/1‑149 (MQ=255)                                                                                                                               cTGCTTGCGACAACGCACCACGGCCATGCCCGGCAGGCTGTAATCCCAGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATGAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGATGCTTCTCGCAAACTCATGACTGATCGACTg                        >  5:89426/1‑148 (MQ=255)                                                                                                                                      cgcCACCCCAGCAGGGCGATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCTACTGTAATCAtt                <  6:89426/149‑1 (MQ=255)                                                                                                                                         cAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGACTGGAATCATTATg             >  6:119527/1‑149 (MQ=255)                                                                                                                                          aaCGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTACTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGACTGGAATCATTATGt            >  7:284938/1‑149 (MQ=255)                                                                                                                                             gCACCAGGGCCATGCCCGGCAGGCTGTATTccctggtgcgttggcgcaagcaggtgggtggtgggggcgatgctgccggcgctgagcgggctgagggcctggggcagggccgggcagttgaacaacaggctgcagtaaccacacttttc         <  4:73825‑M2/149‑120 (MQ=255)                                                                                                                                              cACCAGGGaatacagcctgccgggcatggccctggtgcgttggcgcaagcaggtgggtggtgggggcgatgctgccggcgctgagcgggctgagggcctgtggcagggccgggcagttgaacaacaggctgcagtaaccgcacttttcc        <  1:84395‑M1/149‑142 (MQ=255)                                                                                                                                              cACCAGGGaatacagcctgccgggcatggccctggtgcgttggcgcaagcaggtgggtggtgggggcgatgctgccggcgctgagcgggctgagggcctggggcagggccgggcagttgaacaacaggctgcagtaaccgcacttttcc        <  3:256429‑M1/149‑142 (MQ=255)                                                                                                                                              cACCAGGGCCATGCCCGGCAGGCTGTATTccctggtgcgttggcgcaagcaggtgggtggtgggggcgatgctgccggcgctgagcgggctgagg                                                              <  1:219247‑M2/95‑67 (MQ=255)                                                                                                                                              cACCAGGGCCATGCCCGGCAGGCTGTATTccctggtgcgttggcgcaagcaggtgggtggtgggggcgatgctgccggcgctgagcgggctgagg                                                              >  2:219247‑M2/1‑29 (MQ=255)                                                                                                                                              cACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGACTGGAATCATTATGTCCgg        <  2:56778/149‑1 (MQ=255)                                                                                                                                               aCCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGACTGGAATCATTATGTCCGGc       >  2:267669/1‑149 (MQ=255)                                                                                                                                               aCCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGACTGGAATCATTATGTCCGGc       <  1:267669/149‑1 (MQ=255)                                                                                                                                                 cAGGGaatacagcctgccgggcatggccctggtgcgttggcgcaagcaggtgggtggtgggggcgatgctgccggcgctgagcgggctgagggcctggggcagggccgggcagttgaacaacaggctgcagtaaccgcacttttccca      >  2:59183‑M1/1‑5 (MQ=255)                                                                                                                                                 cAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTACGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGACTGGAATCATTATGTCCGGCTg     >  2:105448/1‑149 (MQ=255)                                                                                                                                                  aGGGaatacagcctgccgggcatggcccgggtgcgttggcgcaagcaggggggtggtgggggcgatgctgccggcgctgagcgggctgagggcctggggcagggccgggcagttgaacaacaggctgcagtaaccgcacttttcccaca    <  2:65589‑M1/149‑146 (MQ=255)                                                                                                                                                   gggCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGACTGGAATCATTATGTCCGGCTGcc   >  4:61590/1‑148 (MQ=255)                                                                                                                                                   gggCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGACTGGAATCATTATGTCCGGCTGCa   >  6:272151/1‑149 (MQ=255)                                                                                                                                                    ggCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGACTGGAATCATTATGTCCGGCTGCAc  <  7:308224/149‑1 (MQ=255)                                                                                                                                                    ggCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGACTGGAATCATTATGTCCGGCTGCAc  <  5:370714/149‑1 (MQ=255)                                                                                                                                                    ggCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCACCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCagga                                                       <  7:36863/96‑1 (MQ=255)                                                                                                                                                    ggCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCACCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCagga                                                       >  8:36863/1‑96 (MQ=255)                                                                                                                                                     gCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATg                                    >  2:78978/1‑114 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GCGGCGATGGCCAGTTGCATGTGATGTGGGAAAAGTGCGGTTACTGCAGCCTGTTGTTCAACTGCCCGGCCCTGCCCCAGGCCCTCAGCCCGC‑TCAGCGCCGGCAGCATCGCCCCCACCACCCACCTGCTTGCGCCAACGCACCAGGGCCATGCCCGGCAGGCTGTATTCCCTGGTGCGCGCAGCCGCGCCCCGCCTTCTTCGATCAACGTCTGAAACAACATTTTGCGCACGAAGCCAGGAGGCTTCGCGCTAACTCATGACTGATCGACTGGAATCATTATGTCCGGCTGCAC  >  NC_002947/5502770‑5503064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.