New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5572520	34 (0.610)	3 (0.060)	3/242	NT	7.1%	coding (245/543 nt)	orn	oligoribonuclease
	?	NC_002947	= 5572559	46 (0.880)					coding (206/543 nt)	orn	oligoribonuclease

TTGCGGTAGTGGAAGTAGTTTTCCAGGTTGCGCATGTGGCGGTAGAGGAAACGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTC  >  NC_002947/5572376‑5572668                                                                                                                                                  |                                                                                                                                                     ttGCGGTAGTGGAAGTAGTTTTCCAGGTTGCGCATGTGGCGGTAGAGGAAACGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCAt                                                                                                                                                  <  3:254103/149‑1 (MQ=255)            gAAGTAGTTTTCCAGGTTGCGCATGTGGCGGTAGAGGAAACGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTg                                                                                                                                        <  5:186312/148‑1 (MQ=255)                  gtTTTCCAGGTTGCGCATGTGGCGGTAGAGGAAACGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTcgc                                                                                                                                 >  5:301903/1‑149 (MQ=255)                  gtTTTCCAGGTTGCGCATGTGGCGGTAGAGGAAACGACGAGCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTcgc                                                                                                                                 <  3:148409/149‑1 (MQ=255)                        cAGGTTGCGCATGTGGCGGTAGAGGAAACGACGATCCTGGCAGATGCTGGTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGATCTCGCGTAcg                                                                                                                            >  1:84557/1‑149 (MQ=255)                            ttGCGCATGTGGCGGTAGAGGAAACGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTg                                                                                                                       <  2:84557/149‑1 (MQ=255)                                     tGGCGGTAGAGGAAACGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCc                                                                                                              >  2:238520‑M2/1‑148 (MQ=255)                                          gTAGAGGAAACGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCccgaag                                                                                                         <  6:119727‑M2/149‑7 (MQ=255)                                             gagGAAACGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGggctgacccagcgcgtacgcgagagcaaggtcagcatggccgaagcc                                                                                                       <  7:59873‑M1/148‑48 (MQ=255)                                               ggAAACGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGct                                                                                                                                      <  5:128144/115‑1 (MQ=255)                                               ggAAACGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGct                                                                                                                                      >  6:128144/1‑115 (MQ=255)                                                gAAACGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTcgc                                                                                                                                 >  4:101357/1‑119 (MQ=255)                                                gAAACGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTcgc                                                                                                                                 <  3:101357/119‑1 (MQ=255)                                                  aaCGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATgg                                                                                                 <  6:301903/149‑1 (MQ=255)                                                   acgacgATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTTACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATggg                                                                                                <  8:250605/149‑1 (MQ=255)                                                    cgacgaTCGTGGCAGATGCT‑GTTGCCTCAGATCGGGGTCTTGCCTTTAGTCAGCCACTGCTCGAGGAAGGCGATGGGCTGTGTCTCGGCTTCGGCCATGGTGTCCTTGCTGTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGt                                                                                               <  8:188154/149‑1 (MQ=255)                                                     gacgaTCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTg                                                                                              >  3:288378/1‑149 (MQ=255)                                                     gacgaTCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTg                                                                                              >  8:88005/1‑149 (MQ=255)                                                         aTCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCggg                                                                                          >  3:107643/1‑149 (MQ=255)                                                             cggCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGtt                                                                                      >  5:71344/2‑149 (MQ=255)                                                              ggCAGATGCT‑GTTGCCGCAGGTCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTc                                                                                     >  3:20581/1‑149 (MQ=255)                                                               gCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGtt                                                                                      <  5:267809/147‑1 (MQ=255)                                                                         gTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGggctgacccagcgcgtacgcgagagcaaggtcagcatggccgaagccgaggcacagaccatc                                                                                        <  3:148435‑M1/136‑63 (MQ=255)                                                                         gTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGggctgacccagcgcgtacgcgagagcaaggtcagcatggccgaagccgaggcacagaccatc                                                                                        >  4:148435‑M1/1‑74 (MQ=255)                                                                              cGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATgcgc                                                                      >  2:8053/1‑149 (MQ=255)                                                                                  gATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCa                                                                  <  5:119727/149‑1 (MQ=255)                                                                                   aTCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAg                                                                 <  4:288378/149‑1 (MQ=255)                                                                                               ccTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACt                                                     >  6:177301/1‑149 (MQ=255)                                                                                                cTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTcc                                                                            >  3:61644/1‑125 (MQ=255)                                                                                                cTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTcc                                                                            <  4:61644/125‑1 (MQ=255)                                                                                                cTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACtg                                                    >  1:147526/1‑149 (MQ=255)                                                                                                cTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCACTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACtg                                                    >  1:11143/1‑149 (MQ=255)                                                                                                  ttAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACtgtg                                                  >  3:87385/1‑149 (MQ=255)                                                                                                   tAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACtgt                                                   <  4:20581/147‑1 (MQ=255)                                                                                                      gCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTgtggtg                                               >  3:6599/1‑148 (MQ=255)                                                                                                        aCCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGAt                                            >  8:314454/1‑149 (MQ=255)                                                                                                                 tCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCAc                                   >  1:206639/1‑149 (MQ=255)                                                                                                                            gATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCccgaagccgaggcacagaccatcgccttcctcgagcagtgggtgcctaaaggcaagtcgccgatctgcggcaac                                     >  4:148435‑M2/1‑62 (MQ=255)                                                                                                                            gATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCccgaagccgaggcacagaccatcgccttcctcgagcagtgggtgcctaaaggcaagtcgccgatctgcggcaac                                     <  3:148435‑M2/136‑75 (MQ=255)                                                                                                                              tGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGc                       >  4:126604/1‑148 (MQ=255)                                                                                                                                           ggCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCccgaagccgaggcacagaccatcgccttcctcgagcagtgggtgcctaaaggcaagtcgccgatctgcggcaacagcatctgccaggatcgtcgtttcctc          <  7:59873‑M2/148‑102 (MQ=255)                                                                                                                                           ggCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCt         >  3:201853/1‑149 (MQ=255)                                                                                                                                             cTTCGGggctgacccagcgcgtacgcgagagcaaggtcagcatggccgaagccgaggcacagaccatcgccttcctcgagcagtgggtgcctaaaggcaagtcgccgatctgcggcaacagcatctgccaggatcgtcgtttcctctac       <  6:119727‑M1/149‑144 (MQ=255)                                                                                                                                             cTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCg       <  4:201853/149‑1 (MQ=255)                                                                                                                                              ttCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTc                                                           >  3:173328/1‑96 (MQ=255)                                                                                                                                              ttCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTc                                                           <  4:173328/96‑1 (MQ=255)                                                                                                                                              ttCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACAATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGc      >  2:65655/1‑149 (MQ=255)                                                                                                                                                cGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCt     <  3:126604/148‑1 (MQ=255)                                                                                                                                                cGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCt     <  4:87385/148‑1 (MQ=255)                                                                                                                                                  gggctgacccagcgcgtacgcgagagcaaggtcagcatggccgaagccgaggcacagaccatcgccttcctcgagcagtgggtgcctaaaggcaagtcgccgatctgcggcaacagcatctgccaggatcgtcgtttcctctaccgcca  >  2:238520‑M1/1‑1 (MQ=255)                                                                                                                                                  gCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTc  <  4:107643/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     TTGCGGTAGTGGAAGTAGTTTTCCAGGTTGCGCATGTGGCGGTAGAGGAAACGACGATCCTGGCAGATGCT‑GTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTC  >  NC_002947/5572376‑5572668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.