New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5572520	34 (0.610)	3 (0.060)	3/242	NT	7.1%	coding (245/543 nt)	orn	oligoribonuclease
	?	NC_002947	= 5572559	46 (0.880)					coding (206/543 nt)	orn	oligoribonuclease

TGGCGGTAGAGGAAACGACGATCCTGGCAGATGCTGTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCGATGATGACGTCGCTG  >  NC_002947/5572412‑5572705                                                                                                                                                    |                                                                                                                                                   tGGCGGTAGAGGAAACGACGATCCTGGCAGATGCTGTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCc                                                                                                                                                   >  2:238520‑M2/1‑148 (MQ=255)      gTAGAGGAAACGACGATCCTGGCAGATGCTGTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCccgaag                                                                                                                                              <  6:119727‑M2/149‑7 (MQ=255)              aaCGACGATCCTGGCAGATGCTGTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATgg                                                                                                                                      <  6:301903/149‑1 (MQ=255)               acgacgATCCTGGCAGATGCTGTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTTACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATggg                                                                                                                                     <  8:250605/149‑1 (MQ=255)                cgacgaTCGTGGCAGATGCTGTTGCCTCAGATCGGGGTCTTGCCTTTAGTCAGCCACTGCTCGAGGAAGGCGATGGGCTGTGTCTCGGCTTCGGCCATGGTGTCCTTGCTGTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGt                                                                                                                                    <  8:188154/149‑1 (MQ=255)                 gacgaTCCTGGCAGATGCTGTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTg                                                                                                                                   >  8:88005/1‑149 (MQ=255)                 gacgaTCCTGGCAGATGCTGTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTg                                                                                                                                   >  3:288378/1‑149 (MQ=255)                     aTCCTGGCAGATGCTGTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCggg                                                                                                                               >  3:107643/1‑149 (MQ=255)                         cggCAGATGCTGTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGtt                                                                                                                           >  5:71344/2‑149 (MQ=255)                          ggCAGATGCTGTTGCCGCAGGTCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTc                                                                                                                          >  3:20581/1‑149 (MQ=255)                           gCAGATGCTGTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGtt                                                                                                                           <  5:267809/147‑1 (MQ=255)                                         cGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATgcgc                                                                                                           >  2:8053/1‑149 (MQ=255)                                             gATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCa                                                                                                       <  5:119727/149‑1 (MQ=255)                                              aTCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAg                                                                                                      <  4:288378/149‑1 (MQ=255)                                                          ccTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACt                                                                                          >  6:177301/1‑149 (MQ=255)                                                           cTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTcc                                                                                                                 <  4:61644/125‑1 (MQ=255)                                                           cTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTcc                                                                                                                 >  3:61644/1‑125 (MQ=255)                                                           cTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACtg                                                                                         >  1:147526/1‑149 (MQ=255)                                                           cTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCACTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACtg                                                                                         >  1:11143/1‑149 (MQ=255)                                                             ttAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACtgtg                                                                                       >  3:87385/1‑149 (MQ=255)                                                              tAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACtgt                                                                                        <  4:20581/147‑1 (MQ=255)                                                                 gCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTgtggtg                                                                                    >  3:6599/1‑148 (MQ=255)                                                                   aCCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGAt                                                                                 >  8:314454/1‑149 (MQ=255)                                                                            tCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCAc                                                                        >  1:206639/1‑149 (MQ=255)                                                                                       gATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCccgaagccgaggcacagaccatcgccttcctcgagcagtgggtgcctaaaggcaagtcgccgatctgcggcaac                                                                          >  4:148435‑M2/1‑62 (MQ=255)                                                                                       gATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCccgaagccgaggcacagaccatcgccttcctcgagcagtgggtgcctaaaggcaagtcgccgatctgcggcaac                                                                          <  3:148435‑M2/136‑75 (MQ=255)                                                                                         tGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGc                                                            >  4:126604/1‑148 (MQ=255)                                                                                                      ggCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCccgaagccgaggcacagaccatcgccttcctcgagcagtgggtgcctaaaggcaagtcgccgatctgcggcaacagcatctgccaggatcgtcgtttcctc                                               <  7:59873‑M2/148‑102 (MQ=255)                                                                                                      ggCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCt                                              >  3:201853/1‑149 (MQ=255)                                                                                                        cTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCg                                            <  4:201853/149‑1 (MQ=255)                                                                                                         ttCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTc                                                                                                >  3:173328/1‑96 (MQ=255)                                                                                                         ttCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTc                                                                                                <  4:173328/96‑1 (MQ=255)                                                                                                         ttCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACAATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGc                                           >  2:65655/1‑149 (MQ=255)                                                                                                           cGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCt                                          <  4:87385/148‑1 (MQ=255)                                                                                                           cGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCt                                          <  3:126604/148‑1 (MQ=255)                                                                                                             gCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTc                                       <  4:107643/149‑1 (MQ=255)                                                                                                                   cTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGa                                  <  6:71344/148‑1 (MQ=255)                                                                                                                        cTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGAtg                             <  1:94505/148‑1 (MQ=255)                                                                                                                        cTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGAtg                             >  2:94505/1‑148 (MQ=255)                                                                                                                        cTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCCCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGAtgg                            <  7:88005/149‑1 (MQ=255)                                                                                                                          tGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCg                                            <  4:93956/131‑1 (MQ=255)                                                                                                                          tGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCg                                            >  3:93956/1‑131 (MQ=255)                                                                                                                           gCTCTCGCGTACGCACTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGAtggtg                          <  2:11143/148‑1 (MQ=255)                                                                                                                                 gcgTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCAtt                    <  2:206639/148‑1 (MQ=255)                                                                                                                                  cgTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTc                  >  7:250325/1‑149 (MQ=255)                                                                                                                                   gTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCCCTCGTCCATGCGCGCCAGCAGTTCGTCACTGTGGTGGATGGCGATCACCGGCCGTTCGGCCTAGGTATTGAGCTCGGTGTCGGTGAGGGTGGTGGcgtgttcg                 >  8:141383/1‑142 (MQ=255)                                                                                                                                   gTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGc                        >  5:66714/1‑142 (MQ=255)                                                                                                                                   gTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGc                        <  6:66714/142‑1 (MQ=255)                                                                                                                                        cgcTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCgatgat            <  5:177301/149‑1 (MQ=255)                                                                                                                                               tCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGa                                  <  3:5552/120‑1 (MQ=255)                                                                                                                                               tCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGa                                  >  4:5552/1‑120 (MQ=255)                                                                                                                                                  gCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCGATGATGACGTCGCTg  >  3:257720/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   TGGCGGTAGAGGAAACGACGATCCTGGCAGATGCTGTTGCCGCAGATCGGCGACTTGCCTTTAGGCACCCACTGCTCGAGGAAGGCGATGGTCTGTGCCTCGGCTTCGGCCATGCTGACCTTGCTCTCGCGTACGCGCTGGGTCAGCCCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCGATGATGACGTCGCTG  >  NC_002947/5572412‑5572705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.