New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5785230 =	32 (0.580)	4 (0.080)	4/244	NT	11.2%	coding (234/1461 nt)	PP_5068	hypothetical protein
	?	NC_002947	5785292 =	33 (0.630)					coding (296/1461 nt)	PP_5068	hypothetical protein

CAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAGGCGAACACTGGGACCTGCACCTCAAGGGCGCCGGCCAGACACCCTACTCCCGCATGGGTGACGGCC  >  NC_002947/5785085‑5785375                                                                                                                                                  |                                                                                                                                                  cccagggcgtgcagggcttcggaggcgagaaactcgcgaatcgacgagcgcagcacggcacggccgtcacccatgcgggagtagggtgtctggccggcgcccttgaggtgcaggtcccagtggtcgcctgcgtcgttgagcacttCgg                                                                                                                                                 >  8:254888‑M1/146‑148 (MQ=255)               gtggtAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTc                                                                                                                                  <  8:166694/149‑1 (MQ=255)               gtggtAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGACGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGTCCAGAATCTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGc                                                                                                                                    <  8:238038/147‑1 (MQ=255)                      cgagcgagTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCg                                                                                                                                                  <  6:150944/126‑1 (MQ=255)                      cgagcgagTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCg                                                                                                                                                  >  5:150944/1‑126 (MQ=255)                       gagcgagTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAAcc                                                                                                                          >  2:174344/1‑149 (MQ=255)                        ggcgagaaactcgcgaatcgacgagcgcagcacggcacggccgtcacccatgcgggagtagggtgtctggccggcgcccttgaggtgcaggtcccagtgttcgcctgcgtcgttgagcacttCGGCCACCAGTTCGGCTCGTACAAcc                                                                                                                          <  5:105853‑M1/26‑1 (MQ=255)                              tCGGCGATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCt                                                                                                                   <  8:171215/149‑1 (MQ=255)                                    aTGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGa                                                                                                             <  6:229723/149‑1 (MQ=255)                                         cTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGcc                                                                                                        >  4:226707/1‑149 (MQ=255)                                         cTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGcc                                                                                                        >  8:2699/1‑149 (MQ=255)                                            gCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGt                                                                                                      <  7:246155/148‑1 (MQ=255)                                            gCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTg                                                                                                     >  5:40699/1‑149 (MQ=255)                                              tcgacctcgaccCCGCCCATGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTGGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTgg                                                                                                                 <  6:15062/135‑1 (MQ=255)                                              tcgaactcgaccCCGCCCAGGCCGAGCTGCCGGTGTTCGCCCAGCTGTTCAGCGGCCACAAACTGAGGGAAGAGGCCGACACTCGGGCGATCGTGTATTCCGGCAACCAGTTCGGCTCGTACAACCCACGTCAgg                                                                                                                 >  5:15062/1‑135 (MQ=255)                                                   ctcgaccCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGAAGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCctgct                                                                                              >  5:341776/1‑149 (MQ=255)                                                      gaccCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCctgctgct                                                                                           <  4:49739/149‑1 (MQ=255)                                                             cggccgtcacccatgcgggagtagggtgtctggccggcgcccttgaggtgcaggtcccagtgttcgcctgcgtcgttgagcacttCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGaa                                                                                    >  6:105853‑M1/86‑149 (MQ=255)                                                             cccAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGaa                                                                                    <  3:25653/149‑1 (MQ=255)                                                              ccAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAg                                                                                   >  5:88982/1‑149 (MQ=255)                                                                  gCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCt                                                                               >  3:90243/1‑149 (MQ=255)                                                                   ccGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTc                                                                              <  4:90243/149‑1 (MQ=255)                                                                       ccatgcgggagtagggtgtctggccggcgcccttgaggtgcaggtcccagtgttcgcctgcgtcgttgagcacttCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGt                                                                                  >  3:235473‑M1/76‑141 (MQ=255)                                                                       ccatgcgggagtagggtgtctggccggcgcccttgaggtgcaggtcccagtgttcgcctgcgtcgttgagcacttCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGt                                                                                  <  4:235473‑M1/66‑1 (MQ=255)                                                                            cGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGAcaca                                                                     >  8:326746/1‑149 (MQ=255)                                                                             ggTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAg                                                                    <  7:2699/149‑1 (MQ=255)                                                                                    gCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCg                                                                                                                                                  >  8:4247/1‑64 (MQ=255)                                                                                    gCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCg                                                                                                                                                  <  7:4247/64‑1 (MQ=255)                                                                                                   ggCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAGGCGAACACTGGGACCTGCAcc                                               >  5:11303/1‑148 (MQ=255)                                                                                                      cacaAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAGGCGAACACTgg                                                         >  7:174161/1‑135 (MQ=255)                                                                                                      cacaAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAGGCGAACACTgg                                                         <  8:174161/135‑1 (MQ=255)                                                                                                       acaAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAGGCGAACACTGGGACCTGCACCTCAAg                                          <  5:47392/149‑1 (MQ=255)                                                                                                       acaAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAGGCGAACACTGGGACCTGCACCTCAAg                                          >  4:13038/1‑149 (MQ=255)                                                                                                        caAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAGGCGAACACTGGGACCTGCACCTCAAgg                                         <  3:13038/149‑1 (MQ=255)                                                                                                        caAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAGGCGAACACTGGGACCTGCACCTCAAgg                                         <  1:174344/149‑1 (MQ=255)                                                                                                             tgtgGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCCCAACGACGCAGGCGa                                                                <  6:277532/121‑1 (MQ=255)                                                                                                             tgtgGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCCCAACGACGCAGGCGa                                                                >  5:277532/1‑121 (MQ=255)                                                                                                                        gCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAGGCGAACACTGGGACCTGCACCTCAAGGGCGCCGGCCAGACAcc                         >  3:182472/1‑149 (MQ=255)                                                                                                                         ccGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAGGCGAACACTGGGACCTGCACCTCAAGGGCGCCGGCCAGACAccc                        <  6:88982/149‑1 (MQ=255)                                                                                                                                  gggCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACACAGGCGAACACTGGGACCTGCACCTCAAGGGCGCCGGCCAGACACCCTACTccc                 <  7:326746/147‑1 (MQ=255)                                                                                                                                    gCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAGGCGAACACTGGGACCTGCACCTCAAGGGCGCCGGCCAGACACCCTACTCCCGCAt             <  3:226707/149‑1 (MQ=255)                                                                                                                                               ttCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAGGCGAACACTGGGACCTGCACCTCAAGGGCGCCGGCCAGACACCCTACTCCCGCATGGGTGACGgcc  >  2:84959/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                  CAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTCGGCTCGTACAACCCACGTCTGGGCGACGGCCGTGGCCTGCTGCTGGCCGAAGTGCTCAACGACGCAGGCGAACACTGGGACCTGCACCTCAAGGGCGCCGGCCAGACACCCTACTCCCGCATGGGTGACGGCC  >  NC_002947/5785085‑5785375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.