New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1499507 =	18 (0.330)	7 (0.140)	6/232	NT	17.2%	intergenic (+84/‑80)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 6060505	51 (1.020)					intergenic (+141/+40)	PP_5311/PP_5312	signal transduction protein/hypothetical protein

CGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCAT  >  NC_002947/6060357‑6060649                                                                                                                                                     |                                                                                                                                                   cGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGc                                                                                                                                                    >  5:184443/1‑149 (MQ=255)        agcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCccgctcc                                                                                                                                             >  5:155144‑M2/1‑142 (MQ=255)          cattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCccgctcc                                                                                                                                             >  8:49272‑M2/1‑140 (MQ=255)          cattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCccgctcc                                                                                                                                             <  7:49272‑M2/147‑8 (MQ=255)            ttaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTGTGGACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCccgcgaaacaa                                                                                                                                         >  3:201921‑M2/1‑138 (MQ=255)              aaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCccgctcccacag                                                                                                                                        >  1:160214‑M2/1‑136 (MQ=255)              aaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCccgctcccacag                                                                                                                                        >  6:332531‑M2/1‑136 (MQ=255)                 acaTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTaa                                                                                                                                   <  8:106308/149‑1 (MQ=255)                 acaTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTa                                                                                                                                    >  8:62392/1‑148 (MQ=255)                  caTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTa                                                                                                                                    >  5:343817/1‑147 (MQ=255)                   aTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑g                                                                                                                                >  7:286858/1‑149 (MQ=255)                    tAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑Gc                                                                                                                               <  4:57675/149‑1 (MQ=255)                       cctgaaaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGtc                                                                                                                            >  7:135758‑M1/53‑149 (MQ=255)                              gAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATcc                                                                                                                     <  7:188650/149‑1 (MQ=255)                                     tGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTACGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCgg                                                                                                              >  8:63485/1‑149 (MQ=255)                                       tCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGc                                                                                                            >  2:80527/1‑149 (MQ=255)                                       tCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGc                                                                                                            <  5:322927/149‑1 (MQ=255)                                          tGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCtt                                                                                                          >  1:259812/1‑148 (MQ=255)                                              cAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGcc                                                                                                     >  6:193265/1‑149 (MQ=255)                                                   tCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCttt                                                                                                  <  1:249451/148‑1 (MQ=255)                                                      aaCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTtcttct                                                                                             <  5:193265/149‑1 (MQ=255)                                                       accgCTGGCGCGATGTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt                                                                                            <  8:267700/146‑1 (MQ=255)                                                       aCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt                                                                                            >  1:258263/1‑149 (MQ=255)                                                        cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt                                                                                           <  2:259812/149‑1 (MQ=255)                                                        cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTACGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt                                                                                           <  7:63485/149‑1 (MQ=255)                                                         aGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTg                                                                                          <  7:235555/149‑1 (MQ=255)                                                               cgcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCAGCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCa                                                                                    <  7:194899/149‑1 (MQ=255)                                                                gcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGTAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCTCGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg                                                                                   <  1:162129/149‑1 (MQ=255)                                                                 cgtttttGGTCTGTGGGCGGGGGGTTTCCCGGGAAAAACGGGGCAGCCGGTGGCATTCACCGCGTGGCTTGGTTGGGGGGCAAGGCCGCT‑CCCAAATGTAAACGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg                                                                                   <  1:80527/146‑1 (MQ=255)                                                                    ttttGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTAt                                                                               >  4:283965/1‑149 (MQ=255)                                                                      ttGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTAtt                                                                              <  6:184443/148‑1 (MQ=255)                                                                          aCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcatc                                                                         <  7:62392/149‑1 (MQ=255)                                                                              tgGGAGCGGGCTTGCCCCCCAACACCGGCGCAGCCGGTTCCAAGCACCTCGTCGCTTGTTTCGCGGGGACGCCCCCA‑CCCACACGTAAA‑GCGTCCACATCCCCGACGGGCTTCAGCCGTTGATCATTGGTTTCAGGTATTTCATCAAcc                                                                     >  4:342492/1‑149 (MQ=25)                                                                              TGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAcc                                                                     <  6:92596‑M1/149‑1 (MQ=255)                                                                              TGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAcc                                                                     >  8:286858‑M1/1‑149 (MQ=255)                                                                                ttcGCGGGCAAGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAcccc                                                                   <  4:232248‑M1/146‑1 (MQ=255)                                                                                GGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAccc                                                                    >  3:283965‑M1/1‑148 (MQ=255)                                                                                 GAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCAGCGGGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCt                                                                  >  3:342492‑M1/1‑149 (MQ=255)                                                                                     GGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGaa                                                              >  2:258263‑M1/1‑149 (MQ=255)                                                                                       GCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCACCCCCTGGAAc                                                             <  5:52258‑M1/148‑1 (MQ=255)                                                                                       GCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTCCTTCTTTGGTTTCAg                                                                                   >  8:148023‑M1/1‑126 (MQ=255)                                                                                       GCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTCCTTCTTTGGTTTCAg                                                                                   <  7:148023‑M1/126‑1 (MQ=255)                                                                                             ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCa                                                      >  1:283549/1‑149 (MQ=255)                                                                                              cgcgAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAc                                                     >  3:71266/1‑149 (MQ=255)                                                                                              cgcgAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCccgctcccaccgactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaaccatgactccct                                                          <  5:89318‑M2/146‑91 (MQ=255)                                                                                              cgcgAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCccgctcccacagactgattgtcattaagcgggcctatcgctacagtgaccgcccgttttttgttgcctcgctaacgaatcatgactccct                                                          <  8:324835‑M2/146‑91 (MQ=255)                                                                                               gcgAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgtt                                                                                    <  2:284372‑M2/119‑65 (MQ=255)                                                                                               gcgAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgtt                                                                                    >  1:284372‑M2/1‑55 (MQ=255)                                                                                                cgAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCtt                                                                                                          <  3:289132/94‑1 (MQ=255)                                                                                                cgAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCtt                                                                                                          >  4:289132/1‑94 (MQ=255)                                                                                                 gAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAg                                                  >  4:334805/1‑149 (MQ=255)                                                                                                   acacCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAgcg                                                >  4:321672/1‑149 (MQ=255)                                                                                                    cacCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAgcgc                                               <  1:344121/149‑1 (MQ=255)                                                                                                      ccGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg                                                                                   <  8:300057/111‑1 (MQ=255)                                                                                                      ccGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg                                                                                   >  7:300057/1‑111 (MQ=255)                                                                                                       cGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcgt                                                                          <  3:34527/119‑3 (MQ=255)                                                                                                       cGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcgt                                                                          >  4:34527/1‑117 (MQ=255)                                                                                                       cGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcat                                                                          <  3:34528/119‑1 (MQ=255)                                                                                                       cGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcat                                                                          >  4:34528/1‑119 (MQ=255)                                                                                                       cGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCgg                                            >  5:363121/1‑149 (MQ=255)                                                                                                                  gTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGa                                 <  5:92596/149‑1 (MQ=255)                                                                                                                  gTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGa                                 <  6:363121/149‑1 (MQ=255)                                                                                                                        tGCACCGAGTCGCTTGTTTCGCGGGGACGCGCGCT‑CCCAGAGGTAAA‑GCTTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTTTTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGa                           <  4:216365/149‑1 (MQ=255)                                                                                                                          cACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGAt                          <  2:283549/148‑1 (MQ=255)                                                                                                                          cACCGCGGCGCCTGTTTCGCGGGCACGCccgctcccaccgactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaaccatgactcccttagaacgctatcaagcagatctgaaacgtc                            >  6:89318‑M2/1‑28 (MQ=255)                                                                                                                           aCCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTgg                                                                <  4:252263/109‑1 (MQ=255)                                                                                                                           aCCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTgg                                                                >  3:252263/1‑109 (MQ=255)                                                                                                                            ccGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGAtgtg                       >  5:202482/1‑149 (MQ=255)                                                                                                                               cgTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTttctt                                                                                               <  4:101369/74‑1 (MQ=255)                                                                                                                               cgTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTttctt                                                                                               >  3:101369/1‑74 (MQ=255)                                                                                                                                 tCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATAATCCCCGTCGCGCTTCAGCCTGTCTTCTTTGGTATCAGGTATTTCATCAACCCCAGGAACCACATCCCCAGCGCCGGGTTCCCCTTGATCTGGATGTGCTTGt                  >  8:57634/1‑149 (MQ=255)                                                                                                                                  cGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTc                 <  4:71266/149‑1 (MQ=255)                                                                                                                                    cggtgttcgcggGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtcccgacttcttc                 >  7:124088‑M2/6‑18 (MQ=255)                                                                                                                                    cTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCt               >  3:240633/1‑149 (MQ=255)                                                                                                                                    cTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCt               <  6:343817/149‑1 (MQ=255)                                                                                                                                           cgcgGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATccc        >  2:260459/1‑149 (MQ=255)                                                                                                                                             cgGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCtt      <  6:52258/149‑1 (MQ=255)                                                                                                                                               ggCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtcccgacttcttccatgacgcggc      >  1:328127‑M2/1‑7 (MQ=255)                                                                                                                                                 cACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCAt  >  3:104185/1‑149 (MQ=255)                                                                                                                                                    gCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtcccgacttcttcc                >  7:324151‑M2/1‑2 (MQ=255)                                                                                                                                                    gCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtcccgacttcttcc                <  8:324151‑M2/134‑133 (MQ=255)                                                                                                                                                    gCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtcccgacttattccatgacgcggcgcag  <  1:350745‑M2/148‑147 (MQ=255)                                                                                                                                                    gCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcaga                                       <  5:246943‑M2/111‑110 (MQ=255)                                                                                                                                                    gCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcaga                                       >  6:246943‑M2/1‑2 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCAT  >  NC_002947/6060357‑6060649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.