New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1876471	41 (0.740)	3 (0.060)	3/246	NT	7.6%	coding (286/1182 nt)	PP_1682	glycoside hydrolase family protein
	?	NC_002947	= 1876531	34 (0.640)					coding (346/1182 nt)	PP_1682	glycoside hydrolase family protein

GTGAAACGTGATTTCCTCCTTGGCAGCGCCGATACCTATGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGATATGGCGCGCGAACTGAAAAGTCATCCGGCCATCGCGGCCTACAACCTGATCAATGAGC  >  NC_002947/1876384‑1876675                                                                                                                                                     |                                                                                                                                                 gTGAAACGTGATTTCCTCCTTGGCAGCGCCGATACCTATGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTg                                                                                                                                                 >  1:314515‑M2/1‑148 (MQ=255)   gAAACGTGATTTCCTCCTTGGCAGCGCCGATACCTATGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTggt                                                                                                                                               >  4:71668‑M2/1‑146 (MQ=255)    aaaCGTGATTTCCTCCTTGGCAGCGCCGATACCTATGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTggtc                                                                                                                                              >  3:4600‑M2/1‑145 (MQ=255)      aCGTGATTTCCTCCTTGGTAGCGCCGATACCTATGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTggtcg                                                                                                                                             <  1:41085‑M2/148‑6 (MQ=255)                   ctTGGTAGCGCCGATACCTATGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAgg                                                                                                                                <  2:41085/148‑1 (MQ=255)                            gcCGATACCTATGAAGGCCTGGCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCga                                                                                                                      <  2:31567/149‑1 (MQ=255)                             ccGATACCTATGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCgat                                                                                                                     <  2:171607/149‑1 (MQ=255)                                    cTATGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCga                                                                                                                      >  5:315604/1‑141 (MQ=255)                                    cTATGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCga                                                                                                                      <  6:315604/141‑1 (MQ=255)                                    cTATGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGcc                                                                                                              >  3:215282/1‑149 (MQ=255)                                     tATGAAGGCCTGTCCGCCGCCGCCCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCCTCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACACCCAGGGCCAGTTCGAGGATCGCCt                                                                                                             >  6:214815/1‑149 (MQ=255)                                      aTGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCtg                                                                                                            >  3:157587/1‑149 (MQ=255)                                       tGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGTCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCtg                                                                                                            <  8:298239/148‑1 (MQ=255)                                       tGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCAGACAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATCATCGCCtg                                                                                                            >  1:277477/1‑149 (MQ=255)                                                gTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACACCCAGGGCCAGTTCGATGATCGCCTGTGGCAAGAc                                                                                                   >  6:210041/1‑148 (MQ=255)                                                   cGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑ACAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAAc                                                                                               >  1:75651/1‑149 (MQ=255)                                                       gCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTa                                                                                           <  1:227097/149‑1 (MQ=255)                                                        ccGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGCGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTAc                                                                                          >  2:1984/1‑149 (MQ=255)                                                         cGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGCTCGCCTGTGGCAAGACAAACCATACt                                                                                         >  2:304771/1‑149 (MQ=255)                                                                gCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTcc                                                                                    <  7:33402/147‑1 (MQ=255)                                                                    tgctgcGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCt                                                                              <  4:215282/149‑1 (MQ=255)                                                                                 ccTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTggtcgagggtggcacgcagcaccgccaggtcggcgtcggacaggccttcataggtatcggcgctgccaaggaggaaatcac                                                                 <  2:319079‑M2/149‑82 (MQ=255)                                                                                   tCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTggtcgagggtggcacgcagcaccgccaggtcggcgtcggacaggccttcataggtatcggcgctgccaaggaggaaatcacgt                                                               <  1:261583‑M2/149‑84 (MQ=255)                                                                                     gACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCgaga                                                             <  6:177283/149‑1 (MQ=255)                                                                                      aCCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGGCATCGCGACACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGat                                                            <  6:233581/149‑1 (MQ=255)                                                                                       ccGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGata                                                           <  2:277477/149‑1 (MQ=255)                                                                                        cGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGatat                                                          >  7:12636/1‑149 (MQ=255)                                                                                                    ggCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTggtcgagggtggcacgcagcaccgccaggtcggcgtcggacaggccttcataggtatcggcgctgccaaggaggaaatcacgtttcaccggatgccatt                                               >  2:261583‑M2/1‑50 (MQ=255)                                                                                                     gCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGATATGGCGCGCGAACt                                              <  2:75651/149‑1 (MQ=255)                                                                                                            tCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGATATGGCGCGCGAACTGaaaa                                         <  3:98792/147‑1 (MQ=255)                                                                                                            tCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGATATGGCGCGCGAACTGaaaa                                         >  4:98792/1‑147 (MQ=255)                                                                                                                    gtCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGATATGGCGCGCGAACTGAAAAGTCATCCGGc                               >  8:7173/1‑149 (MQ=255)                                                                                                                       aTCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGTGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGATATGGCGCGCGAACTGAAAAGTCATCCGGCCAt                            <  1:1984/149‑1 (MQ=255)                                                                                                                       aTCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGATATGGCGCGCGAACTGAAAAGTCATCCGGCCAt                            >  3:97927/1‑149 (MQ=255)                                                                                                                          gcgcCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCACTTCGATGATCGACTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCTGCGTTCTGGCGAGATATGGCGCGCGAACTGAAAAGTCATCCGGCCATcgc                         >  6:301958/1‑149 (MQ=255)                                                                                                                             ccACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGATATGGCGCGCGAACTGAAAAGTCATCCGGCCATCGCGGc                      <  4:97927/149‑1 (MQ=255)                                                                                                                               aCTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGATATGGCGCGCGAACTGAAAAGTCATCCGGCCATCGCGGcc                     >  2:343704/1‑148 (MQ=255)                                                                                                                                   tcGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGATATGGCGCGCGAACTGAAAAGTCATCCGGCCATCGCGGCCTACaa                >  5:186566/1‑149 (MQ=255)                                                                                                                                     gCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTg                                                                             >  1:807/1‑86 (MQ=255)                                                                                                                                     gCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTg                                                                             <  2:807/86‑1 (MQ=255)                                                                                                                                         ccGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGATATGGCGCGCGAACTGAAAAGTCATCCGGCCATCGCGGCCTACAACCTGa           <  4:157587/148‑1 (MQ=255)                                                                                                                                                  cgcTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGATATGGCGCGCGAACTGAAAAGTCATCCGGCCATCGCGGCCTACAACCTGATCAATGAGc  <  7:7173/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                 GTGAAACGTGATTTCCTCCTTGGCAGCGCCGATACCTATGAAGGCCTGTCCGACGCCGACCTGGCGGTGCTGCGTGCCACCCTCGACCGGGCGCA‑CCAGGCGGGGCTCAAGGTGGTCATCGCGCCACTCTCGCTACCGGGTATGCGCTGGTCGCAAAACAACCAGGGCCAGTTCGATGATCGCCTGTGGCAAGACAAACGCTACTGGTCCCAGGCTGCGGCGTTCTGGCGAGATATGGCGCGCGAACTGAAAAGTCATCCGGCCATCGCGGCCTACAACCTGATCAATGAGC  >  NC_002947/1876384‑1876675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.