New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1886721	57 (1.030)	3 (0.060)	3/242	NT	5.1%	coding (1388/1488 nt)	rmuC	DNA recombination limiting inversions protein
	?	NC_002947	= 1886755	57 (1.090)					coding (1422/1488 nt)	rmuC	DNA recombination limiting inversions protein

GGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTCCAGCCCTGATGCATGTACCAGGGCGATGGTTTC  >  NC_002947/1886609‑1886900                                                                                                                                                   |                                                                                                                                                   ggCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAg                                                                                                                                                    <  5:30953/147‑1 (MQ=255) ggCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGcg                                                                                                                                                  >  4:118042‑M2/1‑147 (MQ=255)    aGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGcgggc                                                                                                                                               >  6:244136‑M2/1‑144 (MQ=255)        gCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTg                                                                                                                                           >  4:29312/1‑149 (MQ=255)         cTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGt                                                                                                                                          >  4:100170/1‑149 (MQ=255)            gcagcaGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTc                                                                                                                                         <  3:230593/147‑1 (MQ=255)              agcagGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGAt                                                                                                                                     >  3:300969/1‑149 (MQ=255)               gcacGTGGACAAGGCTTATGCGGCAGCGAGCAACAAGCTCTGAGAAGGCCGTGGAAACCTGGTTAGCCGTAGCGAGCAGCTTAAGATGCTGGCCGCACGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTgaacgct                                                                                                                                     >  5:300904/1‑142 (MQ=255)                cagGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGa                                                                                                                                   <  7:231323/149‑1 (MQ=255)                 agGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAg                                                                                                                                  <  1:66351/149‑1 (MQ=255)                       aCAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTg                                                                                                                            >  4:201989/1‑149 (MQ=255)                          aGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGTGCTGTCCGATGAGGCGCTGccc                                                                                                                         >  4:242218/1‑149 (MQ=255)                           ggCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCg                                                                                                                        <  6:314406/149‑1 (MQ=255)                           ggCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTACCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGccc                                                                                                                         >  5:188774/1‑148 (MQ=255)                            gCTTATGCGGCAGCGCGCAACATGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGa                                                                                                                       <  4:312151/149‑1 (MQ=255)                             cTTATGCGGCAGCGAGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCACGTGCCAGCAAGAGCTTGCCGGCAGACATGCTGGAGCAGGCGCTGTCCGATGAGGCGCTGCCCGAg                                                                                                                      >  7:135102/1‑149 (MQ=255)                                   cGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCg                                                                                                                <  3:150265/149‑1 (MQ=255)                                    ggCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCgg                                                                                                               <  4:300969/149‑1 (MQ=255)                                     gCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTc                                                                                                                                         <  2:348791/122‑1 (MQ=255)                                     gCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTc                                                                                                                                         >  1:348791/1‑122 (MQ=255)                                          gcgcAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACt                                                                                                          >  2:88964/1‑148 (MQ=255)                                           cgcAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGa                                                                                                        <  8:125769/149‑1 (MQ=255)                                           cgcAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGa                                                                                                        <  3:29312/149‑1 (MQ=255)                                            gcAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAg                                                                                                       >  2:354015/1‑149 (MQ=255)                                                 aaGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAgg                                                                                                  >  2:33007/1‑149 (MQ=255)                                                     tgtgCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCt                                                                                                >  1:26642/1‑147 (MQ=255)                                                          gAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATgg                                                                                         >  4:88185/1‑149 (MQ=255)                                                          gAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATgg                                                                                         <  1:354015/149‑1 (MQ=255)                                                          gAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATgg                                                                                         >  5:42306/1‑149 (MQ=255)                                                          gAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATgg                                                                                         <  2:167357/149‑1 (MQ=255)                                                          gAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTACCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATgg                                                                                         <  6:188774/149‑1 (MQ=255)                                                                cGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGAtt                                                                                    >  4:156843/1‑148 (MQ=255)                                                                               cggcGTAGGGAGCAGCTTTAGCTGCTTGGCGCGCGTGCCAGCAAGAGCTTGCCTGCAGTCCTGGTGGAGCTGTCGGTGTCCGAGGAGGCGCTTCCCGAGGTAGCGTTTACTGATCCAGGCTGAGATGGCGATTGAGCAGGGCGGGCaa                                                                     <  6:300904/145‑1 (MQ=255)                                                                                gCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAgg                                                                   >  8:153484/1‑149 (MQ=255)                                                                                 ccGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGc                                                                  >  5:254372/1‑149 (MQ=255)                                                                                      gCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCa                                                              <  6:42306/148‑1 (MQ=255)                                                                                       ccagcagcTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTAc                                                                                                           >  1:193478/3‑102 (MQ=255)                                                                                       ccagcagcTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTAc                                                                                                           <  2:193478/100‑1 (MQ=255)                                                                                        gAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCCTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGc                                                           >  1:210874/1‑149 (MQ=255)                                                                                            agcTTAAGCTGCTGTGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCTGGCTCGGTCCGATGAGGCTCTGCCCGAGGTATCTGTTACTGAGCCAGTCTCAGATTGCTATTGAGCAGTTCGCGCAAGGCCGCAGGC‑TTGa                                                      <  8:135102/149‑1 (MQ=255)                                                                                             gcTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGAc                                                     >  2:318695/1‑149 (MQ=255)                                                                                                   gctgctGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGttt                                               >  7:119158/1‑149 (MQ=255)                                                                                                    ctgctgGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGAt                                                                                     <  2:74537/111‑1 (MQ=255)                                                                                                    ctgctgGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGAt                                                                                     >  1:74537/1‑111 (MQ=255)                                                                                                      gctgGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGTCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGc                                            <  7:153484/149‑1 (MQ=255)                                                                                                       ctgGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGc                                            >  4:120822/1‑148 (MQ=255)                                                                                                          ggCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGTGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAg                                         <  3:242218/148‑1 (MQ=255)                                                                                                          ggCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAgg                                        >  3:251225/1‑149 (MQ=255)                                                                                                           gcgcCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGcgggcgcccagcagcttaagctgctcgctacggctaaccaggttgccacgcccttcgcacagcttgttgcgcgctgccgcataagccttgtccacctgctgcaagcgg                                        <  3:317754‑M2/149‑109 (MQ=255)                                                                                                            cgcCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGcgggcgcccagcagcttaagctgctcgctacggctaaccaggttgccacgcccttcgcacagcttgttgcgcgctgccgcataagccttgtccacctgct                                                <  7:92358‑M2/140‑101 (MQ=255)                                                                                                            cgcCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGcgggcgcccagcagcttaagctgctcgctacggctaaccaggttgccacgcccttcgcacagcttgttgcgcgctgccgcataagccttgtccacctgct                                                >  8:92358‑M2/1‑40 (MQ=255)                                                                                                               ccGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTc                                   <  3:100170/149‑1 (MQ=255)                                                                                                                   gCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTAc                                                                                                           >  8:19685/1‑74 (MQ=255)                                                                                                                   gCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTAc                                                                                                           <  7:19685/74‑1 (MQ=255)                                                                                                                    ccAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTCCAGc                               <  3:88185/148‑1 (MQ=255)                                                                                                                     cAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTa                                                                                                                   >  4:159016/1‑64 (MQ=255)                                                                                                                     cAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTa                                                                                                                   <  3:159016/64‑1 (MQ=255)                                                                                                                       gCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTCCAGCCCt                            >  6:26726/1‑148 (MQ=255)                                                                                                                           gagCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTCCAGCCCTGATg                        >  3:139245/1‑148 (MQ=255)                                                                                                                           gagCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTCCAGCCCTGATGc                       <  1:318695/149‑1 (MQ=255)                                                                                                                            agCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTCCAGCCCTGATGCa                      >  4:243576/1‑149 (MQ=255)                                                                                                                             gCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCATGC‑TTGACCGGTTTGGCCATGTATTCCAGCCCTGATGCAt                     <  1:16866/149‑1 (MQ=255)                                                                                                                                   cGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTCCAGCCCTGATGCATGTAc                 >  8:59480/1‑147 (MQ=255)                                                                                                                                    ggCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTCCAGCCCTGATGCATGTACCAg              <  3:156843/149‑1 (MQ=255)                                                                                                                                    ggCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTCCAGCCCTGATGCATGTACCAg              <  3:243576/149‑1 (MQ=255)                                                                                                                                     gCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTCCAGCCCTGATGCATGTACCAgg             >  5:235438/1‑149 (MQ=255)                                                                                                                                       aGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTCCAGCCCTGATGCATGTACCAGGGc           <  3:120822/149‑1 (MQ=255)                                                                                                                                         cccTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGCCTc                                                                                               <  6:165282/63‑1 (MQ=255)                                                                                                                                              ctgGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGCGTTGACCGGTTTGGCCAGGTAGTCCAGCCCTGATGCATGTACCAGGGCGATg       <  1:88964/147‑1 (MQ=255)                                                                                                                                                 gAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTCCAGCCCTGATGCATGTACCAGGGCGATGGTTTc  <  5:26726/148‑1 (MQ=255)                                                                                                                                                   gCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAgg                                                                             >  6:277817/1‑72 (MQ=255)                                                                                                                                                   gCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAgg                                                                             <  5:277817/72‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                   GGCAGCCGCTTGCAGCAGGTGGACAAGGCTTATGCGGCAGCGCGCAACAAGCTGTGCGAAGGGCGTGGCAACCTGGTTAGCCGTAGCGAGCAGCTTAAGCTGCTGGGCGCCCGTGCCAGCAAGAGCTTGCCGGCAGACCTGCTGGAGCGGGCGCTGTCCGATGAGGCGCTGCCCGAGGTAGCGGTTACTGAGCCAGGCTCAGATGGCGATTGAGCAGGGCGCGCAAGGCCGCAGGC‑TTGACCGGTTTGGCCAGGTAGTCCAGCCCTGATGCATGTACCAGGGCGATGGTTTC  >  NC_002947/1886609‑1886900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.