New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2088717 =	64 (1.160)	4 (0.080)	4/242	NT	6.1%	coding (735/1347 nt)	aroH	3‑deoxy‑7‑phosphoheptulonate synthase
	?	NC_002947	2088756 =	62 (1.180)					coding (696/1347 nt)	aroH	3‑deoxy‑7‑phosphoheptulonate synthase

CGCCACGCAGAAACTCCACATGGGCCCCATCGAGCTGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGCCAGCGCCGAGTTGGCGATGAAGTCCAGGTTCCACTTGT  >  NC_002947/2088608‑2088904                                                                                                                                                     |                                                                                                                                                     cgccacgcAGAAACTCCACATGGGCCCCATCGAGCTGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTgg                                                                                                                                                      <  3:119929/149‑1 (MQ=255)   ccacgcAGAAACTCCACATGGGCCCCATCGAGCTGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGc                                                                                                                                                    >  5:209952/1‑149 (MQ=255)         aGAAACTCCACATGGGCCCCATCGAGCTGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTgaa                                                                                                                                              <  7:163374/149‑1 (MQ=255)               tCCACATGGGCCCCATCGAGCTGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCt                                                                                                                                        >  2:234367/1‑149 (MQ=255)                 cacaTGGGCCCCATCGAGCTGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCtt                                                                                                                                       <  5:6899/148‑1 (MQ=255)                    aTGGGCCCCATCGAGCTGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGttt                                                                                                                                   >  5:311990/1‑149 (MQ=255)                      gggCCCCATCGAGCTGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGATTGTTTcg                                                                                                                                 >  8:284239/1‑149 (MQ=255)                      gggCCCCATCGAGCTGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCAGTGAAGAAGCTTGTTTcg                                                                                                                                 >  4:321073/1‑149 (MQ=255)                           ccATCGAGCTGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGc                                                                                                                                         <  7:68038/136‑1 (MQ=255)                           ccATCGAGCTGGAGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGc                                                                                                                                         >  8:68038/1‑136 (MQ=255)                                 aGCTGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTgcgg                                                                                                                      <  7:214230/149‑1 (MQ=255)                                   cTGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTgcggcg                                                                                                                    <  6:209952/149‑1 (MQ=255)                                    tGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTgcggcg                                                                                                                    >  3:47721/1‑148 (MQ=255)                                        gggTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTg                                                                                                               >  2:244443/1‑149 (MQ=255)                                           tGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTc                                                                                                             >  3:226445/1‑148 (MQ=255)                                            gCGGTCACCGATCCACTGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCa                                                                                                           <  5:349511/149‑1 (MQ=255)                                              gttcatgcgtgcctgtggcctggacagtgcgccgcaactgcgcgaaacaagcttcttcacggccCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTgg                                                                                                                                                      >  2:224797‑M1/65‑104 (MQ=255)                                              gttcatgcgtgcctgtggcctggacagtgcgccgcaactgcgcgaaacaagcttcttcacggccCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTgg                                                                                                                                                      <  1:224797‑M1/40‑1 (MQ=255)                                               gTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGc                                                                                                        >  3:216859/1‑149 (MQ=255)                                               gTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGc                                                                                                        <  4:216859/149‑1 (MQ=255)                                                    cGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTc                                                                                                             >  5:103205/1‑139 (MQ=255)                                                    cGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTc                                                                                                             <  6:103205/139‑1 (MQ=255)                                                    cGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAg                                                                                                   <  4:47721/149‑1 (MQ=255)                                                    cGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAg                                                                                                   >  8:16163/1‑149 (MQ=255)                                                      aTCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAgg                                                                                                  >  5:347050/1‑148 (MQ=255)                                                       tCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCa                                                                                                >  8:337336/1‑149 (MQ=255)                                                          acaGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACg                                                                                              >  4:2195/1‑148 (MQ=255)                                                          acaGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACg                                                                                              >  8:282739/1‑148 (MQ=255)                                                          acaGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGc                                                                                             <  7:337336/149‑1 (MQ=255)                                                            ggCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCAt                                                                                           >  4:348092/2‑149 (MQ=255)                                                            aGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCAt                                                                                           <  4:226445/149‑1 (MQ=255)                                                               aTGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGaa                                                                                        <  2:101345/149‑1 (MQ=255)                                                                      ccGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAgg                                                                                 >  7:256009/1‑149 (MQ=255)                                                                      ccGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAgg                                                                                 >  1:136554/1‑149 (MQ=255)                                                                      ccGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCACCGCTTAGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGTCACGCATGAACGCCact                                                                                 >  4:5351/1‑147 (MQ=255)                                                                         aGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGtt                                                                              <  7:16163/149‑1 (MQ=255)                                                                            aGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCa                                                                           <  6:347050/149‑1 (MQ=255)                                                                                gtagtaGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCGGGGTTTCATCGa                                                                       >  4:176289/1‑149 (MQ=255)                                                                                 tagtagTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGTCACAGGCACGCATGAACGCCAGGGTTTCATCGAt                                                                      <  1:234367/149‑1 (MQ=255)                                                                                 tagtagTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGAt                                                                      >  1:344070/1‑149 (MQ=255)                                                                                  agtagtCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGc                                                                                                                                         >  8:225966/1‑81 (MQ=255)                                                                                  agtagtCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGc                                                                                                                                         <  7:225966/81‑1 (MQ=255)                                                                                       tCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGAtt                                                                <  7:282739/149‑1 (MQ=255)                                                                                       tCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGAtt                                                                >  6:153975/1‑149 (MQ=255)                                                                                         gCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTgg                                                              >  7:138209/1‑149 (MQ=255)                                                                                         gCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTgg                                                              <  6:311990/149‑1 (MQ=255)                                                                                           cGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACg                                                                                      >  5:275354/1‑123 (MQ=255)                                                                                           cGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACg                                                                                      <  6:275354/123‑1 (MQ=255)                                                                                             gTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTcgc                                                                                                                                <  1:75754/79‑1 (MQ=255)                                                                                             gTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTcgc                                                                                                                                >  2:75754/1‑79 (MQ=255)                                                                                             gTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCaa                                                          >  2:150926/1‑149 (MQ=255)                                                                                                        cTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTAc                                                <  6:277925/148‑1 (MQ=255)                                                                                                           gcgcACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACtt                                              <  1:244443/147‑1 (MQ=255)                                                                                                             gcACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCg                                          <  8:138209/149‑1 (MQ=255)                                                                                                             ccacgaagcgctgctgctgaactatgaagaagccttcgtgGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAAc                                                                                       >  2:224797‑M2/41‑104 (MQ=255)                                                                                                             ccacgaagcgctgctgctgaactatgaagaagccttcgtgGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAAc                                                                                       <  1:224797‑M2/64‑1 (MQ=255)                                                                                                               acgaagcgctgctgctgaactatgaagaagccttcgtgGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCg                                          <  7:139835‑M2/109‑1 (MQ=255)                                                                                                               acgaagcgctgctgctgaactatgaagaagccttcgtgGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCg                                          >  8:139835‑M2/39‑147 (MQ=255)                                                                                                               ACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGc                                        >  8:256009‑M1/1‑149 (MQ=255)                                                                                                                     gCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGaa                                                                                        >  5:278358/1‑95 (MQ=255)                                                                                                                     gCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGaa                                                                                        <  6:278358/95‑1 (MQ=255)                                                                                                                      cttcttCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGCCAGCGcc                                 >  4:78948/1‑149 (MQ=255)                                                                                                                       ttcttcATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGc                                        <  7:221501/141‑1 (MQ=255)                                                                                                                       ttcttcATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGc                                        >  8:221501/1‑141 (MQ=255)                                                                                                                       ttcttcATAGTTAAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGCCAGCGcc                                 >  7:3331/1‑148 (MQ=255)                                                                                                                            cATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGCCAGCGCCGAGTTg                           >  3:331045/1‑149 (MQ=255)                                                                                                                                    agcagcagcGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGCCAGCGCCGAGTTGGCTATGaa                   <  3:321073/149‑1 (MQ=255)                                                                                                                                    agcagcagcGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGCCAGCGCCGAGTTGGCGATGa                    <  1:150926/148‑1 (MQ=255)                                                                                                                                     gcagcagcGCGTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGCCAGCGCCGAGTTGGCGATGAAg                  <  2:344070/149‑1 (MQ=255)                                                                                                                                       agcagcGATTCGTGGGCCTTGAAGAAGCTTGTTTCGCGCAGTTGCGTCTCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGCCAGCGCCGAGTTGGCGATGAAGTc                <  3:5351/149‑1 (MQ=255)                                                                                                                                        gcagcGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGCCAGCGCCGAGTTGGCGATGAAGTcc               <  8:3331/149‑1 (MQ=255)                                                                                                                                              cttcgtgGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGCCAGCGCCGAGTTGGCGATGAAGTCCAGGTTc         <  3:78948‑M2/142‑1 (MQ=255)                                                                                                                                                   tgGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGCCAGCGCCGAGTTGGCGATGAAGTCCAGGTTCCACtt    >  8:98811‑M2/3‑149 (MQ=255)                                                                                                                                                     ggCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGCCAGCGCCGAGTTGGCGATGAAGTCCAGGTTCCACTtgt  <  7:284239/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CGCCACGCAGAAACTCCACATGGGCCCCATCGAGCTGGCGGGTGCGGTCACCGATCCACAGCATGTGCGCCGAGCAGTCGTAGTAGTCGCCGGTCAGGCTGTCCTGGCGCACGAAGGCTTCTTCATAGTTCAGCAGCAGCGCTTCGTGGGCCGTGAAGAAGCTTGTTTCGCGCAGTTGCGGCGCACTGTCCAGGCCACAGGCACGCATGAACGCCAGGGTTTCATCGATGCGATTGGCCAACTGGTGGTACTTGTCGGCCAGCGCCGAGTTGGCGATGAAGTCCAGGTTCCACTTGT  >  NC_002947/2088608‑2088904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.