New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3085575 =	51 (0.920)	3 (0.060)	3/240	NT	5.9%	coding (991/1443 nt)	PP_2694	aldehyde dehydrogenase family protein
	?	NC_002947	3085615 =	48 (0.920)					coding (951/1443 nt)	PP_2694	aldehyde dehydrogenase family protein

CATCGCAGGCCAGTTGCAGGCGCTCGCCGCCTTCTATCAGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGCCCGGTGCCGAAGAAGGCCCCGTTGAGCGCGCATTC  >  NC_002947/3085485‑3085761                                                                                                                                   |                                                                                                                                                   cATCGCAGGCCAGTTGCAGGCGCTCGCCGCCTTCTATCAGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGAcc                                                                                                                                  >  2:4632/1‑149 (MQ=255)   tCGCAGGCCAGTTGCAGGCGCTCGCCGCCTTCTATCAGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCtt                                                                                                                                <  1:2748/149‑1 (MQ=255)          gtctgcgacggcatccacgaccgcttcgtcgaggcgctgcgcctgcgcatgcgccagctcaaggtcggccatgcactggagGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTc                                                                                                                                                  <  1:315475‑M1/43‑1 (MQ=255)          gtctgcgacggcatccacgaccgcttcgtcgaggcgctgcgcctgcgcatgcgccagctcaaggtcggccatgcactggagGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTc                                                                                                                                                  >  2:315475‑M1/82‑124 (MQ=255)           cAGTTGCAGGCGCTCGCCGCCTTCTATCAGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGCCCTTGAGCTGgc                                                                                                                        >  7:248885/1‑149 (MQ=255)             gTTGCAGGCTCTCGCCGCCTTCTATCAGGCTGGCTCCTTCGGCCTGGGCCAGTTGCAGGTACGCCAGTTTCTGTTCCAGCTGGCGTGCGTCAGCTATCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGgcgc                                                                                                                      <  8:248885/149‑1 (MQ=255)                        tCGCCGCCTTCTATCAGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATgcgcaggcg                                                                                                           >  2:344407/1‑149 (MQ=255)                          gccgccTTCTATCAGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATgcgcaggcgca                                                                                                         <  5:179206/149‑1 (MQ=255)                                     tCAGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGTCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCGTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTcgac                                                                                               >  5:258594/1‑148 (MQ=255)                                     tCAGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATgg                                                                                                                                        >  7:191026/1‑107 (MQ=255)                                     tCAGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATgg                                                                                                                                        <  8:191026/107‑1 (MQ=255)                                     tCAGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTcgac                                                                                               >  8:211053/1‑148 (MQ=255)                                     tCAGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTcgac                                                                                               >  4:36287/1‑148 (MQ=255)                                     tCAGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTcg                                                                                                 <  1:4632/146‑1 (MQ=255)                                       aGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTcgacg                                                                                              >  2:349376/1‑147 (MQ=255)                                       aGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTcgacg                                                                                              >  3:305480/1‑147 (MQ=255)                                       aGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGaa                                                                                            <  7:322287/149‑1 (MQ=255)                                        gggTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCTGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAg                                                                                           <  1:231566/149‑1 (MQ=255)                                        gggTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAg                                                                                           <  4:16454/149‑1 (MQ=255)                                         ggTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGc                                                                                          >  1:152631/1‑149 (MQ=255)                                               gcCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGt                                                                                    >  3:210338/1‑149 (MQ=255)                                               gcCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGt                                                                                    <  1:344407/149‑1 (MQ=255)                                               gcCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGt                                                                                    <  4:210338/149‑1 (MQ=255)                                                     ggCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATg                                                                               <  1:349376/148‑1 (MQ=255)                                                       ccTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCg                                                                            >  3:15264/1‑149 (MQ=255)                                                       ccTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCg                                                                            >  3:307430/1‑149 (MQ=255)                                                          gggCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCg                                                                         <  2:152631/149‑1 (MQ=255)                                                           ggCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCg                                                                         <  7:211053/148‑1 (MQ=255)                                                            gCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCa                                                                       <  4:307430/149‑1 (MQ=255)                                                             ccAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCTGCTACCGGGCCGATCTGGAAGCCAGCCTCCAGTGCATGGCAGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTCGATGCCGTCTCAg                                                                      >  5:199591/1‑149 (MQ=255)                                                                 ttGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGa                                                                  <  5:165606/149‑1 (MQ=255)                                                                    cAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCa                                                               <  3:36287/149‑1 (MQ=255)                                                                      ggTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGc                                                             <  8:67313/149‑1 (MQ=255)                                                                       gTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGcc                                                            >  6:96235/1‑149 (MQ=255)                                                                          ggCCATGTTCTTTTCCCGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGt                                                          <  4:15264/148‑1 (MQ=255)                                                                                      ttCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCg                                                                                         >  8:114168/1‑105 (MQ=255)                                                                                      ttCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCg                                                                                         <  7:114168/105‑1 (MQ=255)                                                                                        gaggctggcgtccagatcggcccggtagctgacgcacgccagcCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGAc                                                                    <  1:315475‑M2/81‑1 (MQ=255)                                                                                        gaggctggcgtccagatcggcccggtagctgacgcacgccagcCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGAc                                                                    >  2:315475‑M2/44‑124 (MQ=255)                                                                                          aGCTTGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCAttt                                         <  6:183941/149‑1 (MQ=255)                                                                                            ctggcgtccagatcggcccggtagctgacgcacgccagcCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCt                                       >  7:136742‑M2/40‑149 (MQ=255)                                                                                                 GTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGCCCg                                  <  3:735‑M1/149‑1 (MQ=255)                                                                                                    cgtCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGCCCGGt                                <  6:258594/148‑1 (MQ=255)                                                                                                          cTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGCCCGGTGCCg                            >  1:318701/1‑146 (MQ=255)                                                                                                              cGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGCCCGGTGCCGAAGAAgg                     <  4:305480/149‑1 (MQ=255)                                                                                                              cGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGCCCGGTGCCGAAGAAgg                     >  7:108520/1‑149 (MQ=255)                                                                                                               gggCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGCCCGGTGCCGAAGAAGGc                    >  4:6997/1‑149 (MQ=255)                                                                                                                ggCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATc                                                                <  4:278487/104‑1 (MQ=255)                                                                                                                ggCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATc                                                                >  3:278487/1‑104 (MQ=255)                                                                                                                ggCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGc                                     >  3:122573/1‑131 (MQ=255)                                                                                                                ggCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGc                                     <  4:122573/131‑1 (MQ=255)                                                                                                                   cGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGt                                               <  6:226888/118‑1 (MQ=255)                                                                                                                   cGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGt                                               >  5:226888/1‑118 (MQ=255)                                                                                                                   cGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGCCCGGTGCCGAAGAAGGCCCCg                >  6:85893/1‑149 (MQ=255)                                                                                                                     agcTGGACGCCAGCCTCCAGTGCAGGGCCGACCTTGCGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGCAGCGGTCGTGGATGCCGTCGCTGACGATCATCCTTGACGAAGCGGTGCATTCCTGCCCGGTGCCGAAGAAGGCCCCGtt              <  6:199591/147‑1 (MQ=255)                                                                                                                         ggACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGCCCGGTGCCGAAGAAGGCCCCGTTGAgc          >  7:68716/1‑149 (MQ=255)                                                                                                                         ggACGCCAGCCTCCAGTGCATGGCCGACATTGAGCTGGCGCATTCGCAGGAGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGAGGTGCATTTCTGCCCGGTGACGAAGAAGGCCCCTTTGAgc          >  6:370532/1‑149 (MQ=255)                                                                                                                             gccagcCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGCCCGGTGCCGAAGAAGGCCCCGTTGAgcgcg       >  6:179352‑M2/7‑148 (MQ=255)                                                                                                                                 gcCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGCCCGGTGCCGAAGAAGGCCCCGTTGAGCGCGCATTc  <  8:136742‑M2/147‑1 (MQ=255)                                                                                                                                   |                                                                                                                                                   CATCGCAGGCCAGTTGCAGGCGCTCGCCGCCTTCTATCAGGGTGGCGCCTTCGGCCTGGGCCAGTTGCAGGTAGGCCAGGTTCTGTTCCAGCTGGCGTGCGTCAGCTACCGGGCCGATCTGGACGCCAGCCTCCAGTGCATGGCCGACCTTGAGCTGGCGCATGCGCAGGCGCAGCGCCTCGACGAAGCGGTCGTGGATGCCGTCGCAGACGATCAGCCGTGACGAAGCGGTGCATTTCTGCCCGGTGCCGAAGAAGGCCCCGTTGAGCGCGCATTC  >  NC_002947/3085485‑3085761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.