New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3366553 =	42 (0.760)	11 (0.200)	10/252	NT	19.2%	intergenic (+219/‑142)	PP_2962/PP_2964	alcohol dehydrogenase/transposase
	?	NC_002947	5392467 =	51 (0.940)					coding (206/582 nt)	PP_5710	hypothetical protein

TACGAGCTCATTTCTTGCCTTGGGTCTGTAAGCGTCGCTAAGCCGTATGACGCAGTCCTGGGTCTTCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATCGCCTGATCAACTGGTGCAACAGATCGATAGGGA  >  NC_002947/5392322‑5392613                                                                                                                                                  |                                                                                                                                                   tACGAGCCCATTTCTTGCCTTGGGTCTGTAAGCGTCGCTAAGCCGTATGACGCAGTCCTGGGTCTTCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTc                                                                                                                                                  <  1:293031/148‑1 (MQ=255)       cTCATTTCTTGCCTTGGGTCTGTAAGCGTCGCTAAGCCGTATGACGCAGTCCTGGGTCTTCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATg                                                                                                                                           <  7:233161/149‑1 (MQ=255)        tCATTTCTTGCCTTGGGTCTGTAAGCGTCGCTAAGCCGTATGACGCAGTCCTGGGTCTTCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCAtggggt                                                                                                                                           >  2:335394/1‑143 (MQ=255)          agcgaggcaaaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTTCATCGATGCAc                                                                                                                                        >  5:247963‑M2/137‑149 (MQ=255)          aTTTGTTGCCTTGGGTCTGTAAGCGTCGCTAATCCGTTTGACGCAGTGCTGGGTCTTCAAAATAATTTCAGAACGCTCCTTTGTGCCCAGCTCTTTGGTATCCATCATCGTTGGAAGTTGGGTACTCAACGAGTCCTTCATCGATGCAc                                                                                                                                        <  5:189384/149‑1 (MQ=255)          aTTTCTTGCCTTGGGTCTGTAAGCGTCGCTAAGCCGTATGACGCAGTCCTGGGTCTTCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCAc                                                                                                                                        >  1:358619/1‑149 (MQ=255)          aTTTCTTGCCTTGGGTCTGTAAGCGTCGCTAAGCCGTATGACGCAGTCCTGGGTCTTCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCAc                                                                                                                                        <  2:333803/149‑1 (MQ=255)                          agcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgcccttatctcggcataaccccTTCATCGATGCACTGAAATCTACCCCtt                                                                                                                         <  1:80141‑M2/28‑1 (MQ=255)                             tAAGCGTCGCTAAGCCGTATGACGCAGTCCTGGGTCTTCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTa                                                                                                                       <  8:10420/147‑1 (MQ=255)                                    ggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTc                                                                                                              <  3:250636‑M2/39‑1 (MQ=255)                                    cGCTAAGCCGTATGACGCAGTCCTGGGTCTTCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTc                                                                                                              >  8:58978/1‑149 (MQ=255)                                       tAAGCCGTATGACGCAGTCCTGGGTCTTCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCGCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCa                                                                                                           >  3:228387/1‑149 (MQ=255)                                          ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATcc                                                                                                        <  6:247963‑M2/45‑1 (MQ=255)                                                   cGCAGTCCTGGGTCTTCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTg                                                                                                >  7:242109/1‑148 (MQ=255)                                                   cGCAGTCCTGGGTCTTCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGa                                                                                               <  2:358619/149‑1 (MQ=255)                                                            gggTCTTCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCt                                                                                      >  7:275179/1‑149 (MQ=255)                                                                 ttCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGcc                                                                                       <  6:136063/143‑1 (MQ=255)                                                                 ttCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGcc                                                                                       >  5:136063/1‑143 (MQ=255)                                                                 ttCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACGGAAAAGCGCCTTTGaa                                                                                 >  2:279677/1‑149 (MQ=255)                                                                  tCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAAt                                                                                >  4:292496/1‑149 (MQ=255)                                                                   cAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATg                                                                               >  1:256360/1‑149 (MQ=255)                                                                     aaaTAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAAt                                                                                <  5:335162/146‑1 (MQ=255)                                                                     aaaTAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAAt                                                                                >  6:335162/1‑146 (MQ=255)                                                                         tctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGcggcgg                                                                         >  5:179892‑M2/74‑149 (MQ=255)                                                                         tctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGcggcgg                                                                         >  1:93001‑M2/74‑149 (MQ=255)                                                                          atTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGTATGCGGCGGt                                                                        <  8:275179/149‑1 (MQ=255)                                                                           tttCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATgcggcagat                                                                       >  7:25591/1‑145 (MQ=255)                                                                                 cACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCTATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCt                                                                 <  8:242109/149‑1 (MQ=255)                                                                                    gCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGaa                                                                                 <  2:16132/130‑1 (MQ=255)                                                                                    gCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGaa                                                                                 >  1:16132/1‑130 (MQ=255)                                                                                    gCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGcc                                                              >  7:207562/1‑149 (MQ=255)                                                                                         tttGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATa                                                         >  4:131587/1‑149 (MQ=255)                                                                                           tGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATAcc                                                       >  2:287953/1‑149 (MQ=255)                                                                                           atcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATAcc                                                       <  6:179892‑M2/94‑1 (MQ=255)                                                                                            gAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATAcc                                                       <  1:287953/148‑1 (MQ=255)                                                                                                  atttacagaacgaatgtcctaatttttgccttatctcggcataaccccTTCATCGATGCACTGAAATCTACCCCTTTAGCCTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATAc                                                        >  4:29778‑M2/49‑141 (MQ=255)                                                                                                  atttacagaacgaatgtcctaatttttgccttatctcggcataaccccTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATAc                                                        <  3:29778‑M2/93‑1 (MQ=255)                                                                                                  aGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGc                                                 >  1:245364/1‑148 (MQ=255)                                                                                                       tttGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATg                                           >  8:233275/1‑149 (MQ=255)                                                                                                         tGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATg                                           <  7:58978/147‑1 (MQ=255)                                                                                                          ggAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGcca                                        >  5:1337/1‑148 (MQ=255)                                                                                                          ggAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGc                                          <  6:1337/147‑1 (MQ=255)                                                                                                          ggAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCCTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCt                                        >  5:261455/1‑149 (MQ=255)                                                                                                             gaatgtcctaatttttgccttatctcggcataaccccTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGc                                                               <  8:111677‑M2/86‑1 (MQ=255)                                                                                                             gaatgtcctaatttttgccttatctcggcataaccccTTCATCGATGCACTGAAATCTACACCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGc                                                               >  7:111677‑M2/38‑123 (MQ=255)                                                                                                             aTCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTaa                                     <  2:256360/149‑1 (MQ=255)                                                                                                             aTCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTaa                                     <  3:292496/149‑1 (MQ=255)                                                                                                             aTCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTaa                                     >  3:148900/1‑149 (MQ=255)                                                                                                                catcatCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATAc                                                                                                  <  6:171790/85‑1 (MQ=255)                                                                                                                catcatCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATAc                                                                                                  >  5:171790/1‑85 (MQ=255)                                                                                                                catcatCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATc                                   <  4:148900/148‑1 (MQ=255)                                                                                                                 atcatcGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGc                                                 <  7:245995/133‑1 (MQ=255)                                                                                                                 atcatcGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGc                                                 >  8:245995/1‑133 (MQ=255)                                                                                                                 atcatcGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATCGc                                 >  2:13485/1‑149 (MQ=255)                                                                                                                          gCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATc                                   <  7:261566/138‑1 (MQ=255)                                                                                                                          gCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATc                                   >  8:261566/1‑138 (MQ=255)                                                                                                                               ttGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATCGCCt                               <  6:273349/137‑1 (MQ=255)                                                                                                                               ttGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATCGCCt                               >  5:273349/1‑137 (MQ=255)                                                                                                                               ttGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCCTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATCGCCTGATCAACTGGTg                   <  6:261455/149‑1 (MQ=255)                                                                                                                                     aCTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCCCCTTTGAATGCGGCGGTTACATCTGCCGAATAACCAAGGCCACATGCATTAATCGCCTGAACAACTGGTGCaa                >  2:88830/1‑146 (MQ=255)                                                                                                                                       tCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATCGCCTGATCAACTGGTGCaa                >  5:353656/1‑144 (MQ=255)                                                                                                                                         aaCGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATCGCCTGATCAACTGGTGCAACAGAt           <  2:245364/147‑1 (MQ=255)                                                                                                                                         aaCGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATCGCCTGATCAACTGGTGCAACAGATCg         >  6:11027/1‑149 (MQ=255)                                                                                                                                          aCGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATCGCCTGATCAACTGGTGCAACAGATCGa        >  5:205841/1‑149 (MQ=255)                                                                                                                                             accccTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATCGCCTGATCAACTGGTGCAACAGATCGATa      <  2:93001‑M2/143‑1 (MQ=255)                                                                                                                                                ccTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCt                                                                 >  1:50098‑M2/3‑86 (MQ=255)                                                                                                                                                ccTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCt                                                                 <  2:50098‑M2/84‑1 (MQ=255)                                                                                                                                                 cTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGGCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATCGCCTGATCAACTGGTGCTACAGATCGATAGGga  <  4:228387‑M2/147‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   TACGAGCTCATTTCTTGCCTTGGGTCTGTAAGCGTCGCTAAGCCGTATGACGCAGTCCTGGGTCTTCAAAATAATTTCAGCACGCTCCTTTGAGCCCAGCTCTTTGGAATCCATCATCGTTGCAAGTTGGGTACTCAACGAGTCCTTCATCGATGCACTGAAATCTACCCCTTTAGACTTGGTCGCATCCGCATACTGAAAAGCGCCTTTGAATGCGGCGGTTACATCTGCCGAATACCCAAGGCCACATGCCTTAATCGCCTGATCAACTGGTGCAACAGATCGATAGGGA  >  NC_002947/5392322‑5392613

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.