New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3366553 =42 (0.760)39 (0.720) 28/252 NT 60.3% intergenic (+219/‑142) PP_2962/PP_2964 alcohol dehydrogenase/transposase
?NC_002947 5399834 = 10 (0.180)coding (647/1437 nt) PP_4743 hypothetical protein

CTACATCTATTCCATCGTCGAGTTATTCAAAGACCGAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTAGTCAATAAAGTCAATAAAGCAGACATCATAAAATCACTCTCCGCCGGTCTTATTTC  >  NC_002947/5399688‑5399981
                                                                                                                                                  |                                                                                                                                                   
acatcccccaagcgaggcaaaagcatcagcatagacggctagacagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccaca                                                                                                                                                   <  3:308447‑M2/3‑1 (MQ=255)
         ttCCATCGTCGAGTTATTCAAAGACCGAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATACTAATGa                                                                                                                                          <  4:156745/149‑1 (MQ=255)
            cgaggcaaaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTa                                                                                                                                       <  4:169768‑M2/15‑1 (MQ=255)
            cattgcagAGTTATTCAAAGACAGAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCTAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATACTAATGAGTa                                                                                                                                       <  1:278485/142‑1 (MQ=255)
            cATCGTCGAGTTATTCAAAGACCGAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcctgc                                                                                                                                       <  8:296949‑M2/149‑11 (MQ=255)
             aTCGTCGAGTTATTCAAAGACCGAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgcc                                                                                                                                      <  3:139776‑M2/149‑12 (MQ=255)
                gtcgAGTTATTCAAAGACCGAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATACTAATGAGTAGCCa                                                                                                                                   >  4:71235/1‑149 (MQ=255)
                        atcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCtt                                                                                                                           >  8:289458‑M2/123‑149 (MQ=255)
                        aTTCAAAGACCGAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATACTAATGAGTAGCCATAGTGCt                                                                                                                            <  3:71235/148‑1 (MQ=255)
                         ttCAAAGACCGAAATTGTCTAACTTTGCTAGACGAGCCGGATTAATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGAAGCAGCGGCTAAAAGCAACCACATAcgggtcatgacgacataaggca                                                                                                                           <  3:201084‑M2/148‑23 (MQ=255)
                          tCAAAGACCGAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATGCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaa                                                                                                                          <  1:273590‑M2/148‑24 (MQ=255)
                            aaaGACCGAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaa                                                                                                                       <  7:249553‑M2/149‑27 (MQ=255)
                                aCCGAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattag                                                                                                                   >  1:152881‑M2/1‑119 (MQ=255)
                                 gacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATc                                                                                                                   <  8:127119‑M2/35‑1 (MQ=255)
                                 ccGAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattagg                                                                                                                  >  2:273590‑M2/1‑118 (MQ=255)
                                 ccGAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattag                                                                                                                   <  4:269308‑M2/148‑31 (MQ=255)
                                   gAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGAAAGTAATAGAGATAACTTATGCAGCGGCTAAAATCAACCACATAgatgtcaatactagataagtcaaaaattagga                                                                                                                 <  1:331976‑M2/148‑33 (MQ=255)
                                            tAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttct                                                                                                       <  7:24620‑M2/149‑43 (MQ=255)
                                            agacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAAc                                                                                                       >  3:81212‑M2/103‑149 (MQ=255)
                                            agacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcataatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAAc                                                                                                       >  5:257958‑M2/103‑149 (MQ=255)
                                                  tggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAAc                                                                                                 <  8:120809‑M2/53‑1 (MQ=255)
                                                  tggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAAc                                                                                                 >  4:266061‑M2/97‑149 (MQ=255)
                                                    gatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcataatttttgccttatctcggcataaacccAAATACTAATGAGTAGCCATAGTGCTTCGACCATAACGACTGCAAACGAAAACCt                                                                                               >  7:23593‑M2/95‑149 (MQ=255)
                                                       gACGAGCATGATTCATTCATACATCACGAATTGCAGTTTGAATTACAGAAGCAAGTACTAGAGATAACTGATTCAGCGGCTAAAAGCAACCACATAgggttcatgacgagataatgcaaaaattaggacattcgttctctaagctatt                                                                                             >  2:331976‑M2/1‑96 (MQ=255)
                                                         ccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatatcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGACATAGTGCTTCGACCATCACGCCTGAAAACGAAAAACtcatc                                                                                           >  8:298873‑M2/90‑148 (MQ=255)
                                                          gAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtat                                                                                         >  1:314407‑M2/1‑93 (MQ=255)
                                                           agcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAAc                                                                                        >  5:31484‑M2/88‑149 (MQ=255)
                                                                gATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaac                                                                                   >  8:24620‑M2/1‑87 (MQ=255)
                                                                 ccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttctgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACTTCATCAACTTATTc                                                                                  <  7:95123‑M2/68‑1 (MQ=255)
                                                                   acttcctctcgaataaccttttaaatcatatatttacataacgaatttcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGa                                                                                <  8:23593‑M2/70‑1 (MQ=255)
                                                                     attcCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggtgtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagta                                                                              >  3:269308‑M2/1‑82 (MQ=255)
                                                                     attcCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagta                                                                              <  3:51639‑M2/149‑68 (MQ=255)
                                                                     attcCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagta                                                                              <  2:336349‑M2/149‑68 (MQ=255)
                                                                     attcCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagta                                                                              <  1:167270‑M2/149‑68 (MQ=255)
                                                                     attcCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataa                                                                                                                               >  1:39222‑M2/1‑82 (MQ=255)
                                                                     attcCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataa                                                                                                                               <  2:39222‑M2/100‑19 (MQ=255)
                                                                        ccTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACCGATGAAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagat                                                                           <  2:55085‑M2/149‑71 (MQ=255)
                                                                          tACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagatta                                                                         <  1:245490‑M2/149‑73 (MQ=255)
                                                                          ctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAg                                                                                                                                         >  7:200100‑M2/73‑85 (MQ=255)
                                                                          ctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAg                                                                                                                                         <  8:200100‑M2/13‑1 (MQ=255)
                                                                           aCATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagat                                                                           <  3:152900‑M2/146‑71 (MQ=255)
                                                                                   ccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAgacgac                                                                   >  2:101195‑M2/64‑146 (MQ=255)
                                                                                   aaTGGCAGATTGAAATCCCGAACCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctg                                                                >  8:249553‑M2/1‑68 (MQ=255)
                                                                                    cttttaaatcatatatttactgaacgaatatcctaatttttgccttatctcggcataaccccACATACTAATGATTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGa                                                               <  7:298873‑M2/87‑1 (MQ=255)
                                                                                     ttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTAGAGCTCCAAGACGacaatc                                                               >  1:14537‑M2/62‑146 (MQ=255)
                                                                                     ttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACAACTGCAAACGaaaa                                                                                                  <  5:125600‑M2/52‑1 (MQ=255)
                                                                                     ttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACAACTGCAAACGaaaa                                                                                                  >  6:125600‑M2/62‑113 (MQ=255)
                                                                                       ttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGacaatc                                                               <  2:14537‑M2/87‑3 (MQ=255)
                                                                                       ttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGAtt                                                             <  7:289458‑M2/89‑1 (MQ=255)
                                                                                         aaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTg                                                            >  1:6592‑M2/58‑147 (MQ=255)
                                                                                         aaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTa                                                          >  1:12496‑M2/58‑149 (MQ=255)
                                                                                         aaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTa                                                          >  1:152467‑M2/58‑149 (MQ=255)
                                                                                          aatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTa                                                          <  3:266061‑M2/92‑1 (MQ=255)
                                                                                            tcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTagt                                                        >  3:160494‑M2/55‑148 (MQ=255)
                                                                                              gAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaag                                                      >  1:169818‑M2/1‑57 (MQ=255)
                                                                                              atatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTagtca                                                      <  2:6592‑M2/96‑1 (MQ=255)
                                                                                              atatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTagtca                                                      <  2:12496‑M2/96‑1 (MQ=255)
                                                                                                aTTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagac                                                    >  4:139776‑M2/1‑55 (MQ=255)
                                                                                                 ttCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagt                                                                               >  6:364633‑M2/1‑54 (MQ=255)
                                                                                                 ttCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagt                                                                               <  5:364633‑M2/120‑67 (MQ=255)
                                                                                                   cccGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgct                                                <  3:325277‑M2/149‑98 (MQ=255)
                                                                                                    ccGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcag                                                           <  2:193926‑M2/137‑87 (MQ=255)
                                                                                                    ccGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcag                                                           >  1:193926‑M2/1‑51 (MQ=255)
                                                                                                     cGAAGCAAGTACTTGAGATCACTTATGCAGCTTCTAAAATCAACCTCATTgtggtaatgccgttataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttc                                              >  7:296949‑M2/1‑50 (MQ=255)
                                                                                                     cGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttc                                              >  1:336349‑M2/1‑50 (MQ=255)
                                                                                                       cagaacgaatgtcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTagtcaataaagtcaa                                            <  4:81212‑M2/106‑1 (MQ=255)
                                                                                                        aGCAAGTACTAGAGATCACCGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgc                                            >  1:55085‑M2/1‑47 (MQ=255)
                                                                                                          cAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcc                                         >  4:152900‑M2/1‑45 (MQ=255)
                                                                                                           aaGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcc                                         <  5:129680‑M2/148‑105 (MQ=255)
                                                                                                           aaGTACTAGAGATCACTGATGAAGCGGCTAAAATCAACCACATACTAATGAGTAGCCATAGTGATTCGACACTCACGCGTGCAAACGAAAACCTCATAAAATTATTCGAGCTCCAAGACGACAAGATTTTtgtctaaaaagtcaata                                          >  8:130229/1‑147 (MQ=255)
                                                                                                                 tAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgaga                                                                                                                                  >  7:197609‑M2/1‑38 (MQ=255)
                                                                                                                 tAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgaga                                                                                                                                  <  8:197609‑M2/53‑16 (MQ=255)
                                                                                                                  tcctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTAGTCAATAAAGTCAATAAAGCAGAca                                 >  1:346967‑M2/33‑149 (MQ=255)
                                                                                                                    ctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTAGTCAATAAAGTCAATAAAGCAGAcatc                               <  6:257958‑M2/119‑1 (MQ=255)
                                                                                                                    ctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTAGTCAATAAAGTCAATAAAGCAGAcatc                               <  4:160494‑M2/119‑1 (MQ=255)
                                                                                                                    ctaatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTAGTCAATAAAGTCAATAAAGCAGAcatc                               <  1:101195‑M2/119‑1 (MQ=255)
                                                                                                                     taatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCaaa                                                                                                        <  8:254693‑M2/46‑1 (MQ=255)
                                                                                                                     taatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCaaa                                                                                                        >  7:254693‑M2/30‑75 (MQ=255)
                                                                                                                     taatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTc                                                                                  <  8:34483‑M2/68‑1 (MQ=255)
                                                                                                                     taatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTc                                                                                  >  7:34483‑M2/30‑97 (MQ=255)
                                                                                                                     taatttttgccttatctcggcataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTAGTCAATAAAGTCAATAAAGCAGAcatc                               >  5:139893‑M2/30‑148 (MQ=255)
                                                                                                                      aTCACTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcag                             >  2:167270‑M2/1‑33 (MQ=255)
                                                                                                                         aCTGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagcca                          <  3:74024‑M2/149‑120 (MQ=255)
                                                                                                                         aCTGATGCAGCGGCTAAAAGCAACCACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTAGTCAATAAAGTCAATAAAGCa                                     <  7:125695/138‑1 (MQ=255)
                                                                                                                         aCTGATGCAGCGGCTAAAAGCAACCACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTAGTCAATAAAGTCAATAAAGCa                                     >  8:125695/1‑138 (MQ=255)
                                                                                                                           tGATGCAGCGGCTAAAAGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctcagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagccatc                        >  4:201084‑M2/1‑28 (MQ=255)
                                                                                                                             aTGCAGCGGCTAAAAGCAACCACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTAGTCAATAAAGTCAATAAAGCAGACATCATAAAATc                       >  3:92221/1‑148 (MQ=255)
                                                                                                                                       tAAAAGCAACCACATACTAATGAGTAGCCATAGTGCTTCGAAAATCACGACTGCAAACGAAAACCTAATCAACTTATTCGAGCTCCAAGACGACAAGAATGTAGTCAATAAAGTCAAAAAAGAAGACAACATAAAATAACTCTccgcag            >  3:279013/1‑147 (MQ=255)
                                                                                                                                         cataaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTAGTCAATAAAGTCAATAAAGCAGACATCATAAAATCACTCTCCGCCGGt          <  6:31484‑M2/140‑1 (MQ=255)
                                                                                                                                         aaaGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagccatccatt                    <  8:101117‑M2/139‑126 (MQ=255)
                                                                                                                                         aaaGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagccatccatt                    >  7:101117‑M2/1‑14 (MQ=255)
                                                                                                                                         aaaGCAACCACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTAGTCAATAAAGTCAATAAAGCAGACATCATAAAATCACTCTCCGCCGGt          >  6:278039/1‑149 (MQ=255)
                                                                                                                                           aGCAACCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagccatccattgaggaaggttt         <  7:20536‑M2/148‑137 (MQ=255)
                                                                                                                                            aaccccACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTAGTCAATAAAGTCAATAAAGCAGACATCATAAAATCACTCTCCGCCGGTCt        >  1:133052‑M2/7‑148 (MQ=255)
                                                                                                                                              aaCCACATAggggtcatgccgagataaggtaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagccatccattgaggaaggtttgatc     <  3:143979‑M2/149‑141 (MQ=255)
                                                                                                                                               aCCACATAggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagccatccattgaggaaggtttgatct    >  2:245490‑M2/1‑8 (MQ=255)
                                                                                                                                                 cACATACTAATGATTAGCCATAGTGCTTCGACCATCACGACTGCAAAAGAAAACCTCATCAACTTATTCTAGCTCCAAGACTACAAGAGTGTAGTCAATAAAGTCAATAAAGCAGACATCATAAAATCACTCTCCGCCGGTCTTATTTc  <  1:265873‑M2/148‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
CTACATCTATTCCATCGTCGAGTTATTCAAAGACCGAAATTGTCTAACTTTGCTAGACGAGCCGGATTCATTCCTACATCCCGAATGGCAGTTTGAATTCCCGAAGCAAGTACTAGAGATCACTGATGCAGCGGCTAAAAGCAACCACATACTAATGAGTAGCCATAGTGCTTCGACCATCACGACTGCAAACGAAAACCTCATCAACTTATTCGAGCTCCAAGACGACAAGATTGTAGTCAATAAAGTCAATAAAGCAGACATCATAAAATCACTCTCCGCCGGTCTTATTTC  >  NC_002947/5399688‑5399981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.