New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3647188 =	55 (0.990)	3 (0.060)	3/238	NT	5.8%	intergenic (‑125/‑529)	PP_3213/PP_3214	ABC transporter substrate‑binding protein/hypothetical protein
	?	NC_002947	3647269 =	46 (0.890)					intergenic (‑206/‑448)	PP_3213/PP_3214	ABC transporter substrate‑binding protein/hypothetical protein

AGCCGGGCGGAGAGAACGTGGGAAGAGAATGGCGTCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAGGGGGACGGCACTGACGCGTGAGTTGAGAAGGTG  >  NC_002947/3647121‑3647410                                                                                                                                                     |                                                                                                                                              aGCCGGGCGGAGAGAACGTGGGAAGAGAATGGCGTCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGc                                                                                                                                               <  1:338607/149‑1 (MQ=255)  gCCGGGCGGAGAGAACGTGGGAAGAGAATGGCGTCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGTGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGc                                                                                                                                               <  7:129117/148‑1 (MQ=255)  gCCGGGCGGAGAGAACGTGGGAAGAGAATGGCGTCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGc                                                                                                                                               >  8:129117/1‑148 (MQ=255)  atttggcatgcttctgggttcttgtatcagcgagtagaagcggtcagtgcctgggatggcatggggCATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGc                                                                                                                                               >  2:323892‑M1/67‑148 (MQ=255)          gagagaACGTGGGAAGAGAATGGCGTCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCccatgcca                                                                                                                                      >  5:273600/1‑149 (MQ=255)          gagagaACGTGGGAAGAGAATGGCGTCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCccatgcca                                                                                                                                      >  3:119884/1‑149 (MQ=255)                aCGTGGGAAGAGAATGGCGTCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTg                                                                                                                                <  3:205901/149‑1 (MQ=255)                  gTGGGAAGAGAATGGCGTCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTgg                                                                                                                               >  5:346674/1‑148 (MQ=255)                   tGGGAAGAGAATGGCGTCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCGCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCa                                                                                                                             <  1:313347/149‑1 (MQ=255)                                gCGTCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTa                                                                                                                >  5:166755/1‑149 (MQ=255)                                gCGTCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTa                                                                                                                <  6:166755/149‑1 (MQ=255)                                   tCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCAGGCATGGCatgg                                                                                                                          <  3:184303/136‑4 (MQ=255)                                   tCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCAGGCATGGCatgg                                                                                                                          >  4:184303/1‑133 (MQ=255)                                     gctaatcAAAAGGGCGTTTACTGGAAACTGAGATTGCTCTCTTGCCCTGGGCTTCCATAGCCTCGTTCAAACATCCGCTCGGATGTAAGAGCCTAAGGACGCAAGAGCAATTGCCCATGCCATGCCTGTCACTGACCGCTTCTACTct                                                                                                            <  6:50711/142‑2 (MQ=255)                                        aaGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGa                                                                                                        <  6:150301/149‑1 (MQ=255)                                        aaGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGa                                                                                                        <  6:346674/149‑1 (MQ=255)                                          gCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATa                                                                                                      <  6:343267/149‑1 (MQ=255)                                                  gCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGc                                                                                              <  8:48889/149‑1 (MQ=255)                                                   cGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACGAGAAGc                                                                                              >  6:263266/1‑148 (MQ=255)                                                            gAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCAt                                                                                     <  6:273600/148‑1 (MQ=255)                                                            gAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATg                                                                                    >  7:12055/1‑149 (MQ=255)                                                            gAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATg                                                                                    <  6:42288/149‑1 (MQ=255)                                                               aCTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGcc                                                                                  >  5:334690/1‑148 (MQ=255)                                                                   gcattgctcttgcgtccttcggggcgtacatccgagcggatgtttgaacgaggctatggcagccccgggcaagagagcaatgCCCCATGCCATCCCAGGCACTGACCGCTTCTACTCGCTGATACAAGAACCCAGAAGCATGccaaat                                                                              >  2:323892‑M2/83‑146 (MQ=255)                                                                    cattgctcttgcgtccttcggggcgtacatccgagcggatgtttgaacgaggctatggcagccccgggcaagagagcaatgCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAAttt                                                                             >  3:40973‑M2/82‑148 (MQ=255)                                                                      ttgctcttgcgtccttcggcgcgtacatccgagcggatgtttgaacgaggctatggcagccccgggcaagagagcaatgCCCCATGCCCTGCCAGGCACTGACCGCTTCTACTCCCTGATACAAGAAGGCAGAAGCATGCCATTTTCAt                                                                          >  4:272381‑M2/80‑149 (MQ=255)                                                                      TTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCAt                                                                          >  8:222088‑M1/1‑149 (MQ=255)                                                                            TCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACaagaa                                                                                                <  7:158554‑M1/121‑1 (MQ=255)                                                                            TCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACaagaa                                                                                                >  8:158554‑M1/1‑121 (MQ=255)                                                                                gCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCt                                                                 <  5:337896/148‑1 (MQ=255)                                                                                     gggCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACttt                                                           >  8:316590/1‑149 (MQ=255)                                                                                           ccATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGcccc                                                                                                                                            >  5:317026/1‑62 (MQ=255)                                                                                           ccATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGcccc                                                                                                                                            <  6:317026/62‑1 (MQ=255)                                                                                            cATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCg                                                        <  1:184516/145‑1 (MQ=255)                                                                                            cATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCg                                                        >  2:184516/1‑145 (MQ=255)                                                                                             aTAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACGAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTa                                                   <  5:263266/149‑1 (MQ=255)                                                                                             aTAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGgtg                                                     >  1:247183/1‑147 (MQ=255)                                                                                             aTAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGgtg                                                     >  1:232016/1‑147 (MQ=255)                                                                                             aTAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTa                                                   <  1:223341/149‑1 (MQ=255)                                                                                             aTAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTa                                                   <  6:334690/149‑1 (MQ=255)                                                                                             aTAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGACCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTTATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTa                                                   <  4:216144/149‑1 (MQ=255)                                                                                              tAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAg                                                  >  1:278437/1‑149 (MQ=255)                                                                                              tAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAg                                                  <  4:119884/149‑1 (MQ=255)                                                                                                   tCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATg                                                                         <  7:299711/121‑1 (MQ=255)                                                                                                   tCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATg                                                                         >  8:299711/1‑121 (MQ=255)                                                                                                    cGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGAccc                                            >  8:141228/1‑149 (MQ=255)                                                                                                         aaaCATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGgtgt                                                    <  3:178330/136‑1 (MQ=255)                                                                                                         aaaCATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGgtgt                                                    >  4:178330/1‑136 (MQ=255)                                                                                                               ccgagcGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAggg                                 >  1:168209/6‑149 (MQ=255)                                                                                                                cGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAgggg                                >  5:210229/1‑149 (MQ=255)                                                                                                                   tCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACt                                                             <  6:349095/117‑1 (MQ=255)                                                                                                                   tCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACt                                                             >  5:349095/1‑117 (MQ=255)                                                                                                                    cGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAGGGGGACg                            >  1:109193/1‑149 (MQ=255)                                                                                                                      gATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAGGGGGACgg                           >  7:275899/1‑148 (MQ=255)                                                                                                                       aTGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAGGGGGACGGCa                         <  7:316590/149‑1 (MQ=255)                                                                                                                              ccccGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCAt                                                                          >  7:108068/1‑93 (MQ=255)                                                                                                                              ccccGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCAt                                                                          <  8:108068/93‑1 (MQ=255)                                                                                                                                ccGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAGGGGGACGGCACTGACGCGt                <  2:168209/149‑1 (MQ=255)                                                                                                                                         gCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAGGGGGACGGCACTGACGCGTGAGTTgag        >  3:184695/1‑148 (MQ=255)                                                                                                                                           aaGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAGGGGGACGGCACTGa                     <  7:154432/133‑1 (MQ=255)                                                                                                                                           aaGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAGGGGGACGGCACTGa                     >  8:154432/1‑133 (MQ=255)                                                                                                                                           aaGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAGGGGGACGGCACTGACGCGTGAGTTGAGAAg     >  3:291838/1‑149 (MQ=255)                                                                                                                                             gagcaatgCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAGGGGGACGGCACTGACGCGTGAGTTGAGAAGGt   <  6:210229‑M2/141‑1 (MQ=255)                                                                                                                                              agcaatgCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAGGGGGACGGCACTGACGCGTGAGTTGAGAAGGTg  <  4:291838‑M2/142‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                              AGCCGGGCGGAGAGAACGTGGGAAGAGAATGGCGTCGCGAAGCAAAAGGGCGTGAACTGGAAACTGACATTGCTCTCTTGCCCGGGGCTGCCATAGCCTCGTTCAAACATCCGCTCGGATGTACGCCCCGAAGGACGCAAGAGCAATGCCCCATGCCATGCCTGGCACTGACCGCTTCTACTCGCTGATACAAGAAGCCAGAAGCATGCCAATTTCATGAAGCCGCTGACTTTGCGGTGTAGCGACCCGCACCCGAGGGGGACGGCACTGACGCGTGAGTTGAGAAGGTG  >  NC_002947/3647121‑3647410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.