New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4098170 = | 52 (0.940) | 3 (0.060) | 3/242 | NT | 5.9% | coding (520/975 nt) | qor‑II | quinone oxidoreductase |
? | NC_002947 | 4098214 = | 47 (0.900) | coding (476/975 nt) | qor‑II | quinone oxidoreductase |
CTTGGCCTTGGGTCAGCTCACGCACCTGGCTGGCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCTTGAACAGCACCGCTGCGGCGGCCTCGTCCTCCAAC > NC_002947/4098068‑4098357 | cttggccttggGGCAGCTCACGCTCCTGGCTGGCAAAGGTTTTTGCTGCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCaa < 4:261939/149‑1 (MQ=255) acggcgcaatatctgttgaaaaccacctatgccgtagggccgggcacccaggtgttgttgtacggtgcggccggtgctttgggccagctgatggtgccttgGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCaa > 7:258289‑M1/102‑148 (MQ=255) gccttggGTCAGCTCACGCACCTGGCTGGCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGc < 8:134823/148‑1 (MQ=255) ccttggGTCAGCTCACGCACCTGGCTGGCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCAc > 5:95145/1‑149 (MQ=255) ccttggGTCAGCTCACGCACCTGGCTGGCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCAc > 6:167725/1‑149 (MQ=255) ggTCAGCTCACCCACCTGGCTGGCCAAGGTTTTTGCGCCGAACACCAGCACATGCTGGCAACCCGCCGCCCGGGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGGCGCCCCCAGGTGTCGCGCCCAAGGCACCATCa < 1:2284/149‑1 (MQ=255) gTCAGCTCACGCACCTGGCTGGCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAg > 6:232470/1‑149 (MQ=255) gTCAGCTCACGCACCTGGCTGGCCAAGGTTTTTGCGTCGAACAACAGCACAAGCTGGCAACCCGCCGCACCTGACCGCTCCACACTTTGCACCCGCGATACCACCCATAACAACGTCGCCCCCAGGTGTCGCGCACAAGGCACCAt > 5:261896/1‑146 (MQ=255) gCTCACGCACCTGGCTGGCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTgg < 4:119539/149‑1 (MQ=255) aCGCACCTGGCTGGCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGccc < 8:170172/148‑1 (MQ=255) aCGCACCTGGCTGGCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGccc > 8:169564/1‑148 (MQ=255) aCGCACCTGGCTGGCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGccc > 2:156664/1‑148 (MQ=255) ctggctggCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCAc > 8:154506/1‑149 (MQ=255) tggcCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGcc > 4:342012/1‑149 (MQ=255) ccAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCAcc > 2:13235/1‑142 (MQ=255) ccAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCAcc < 1:13235/142‑1 (MQ=255) cAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCAc > 6:320918/1‑149 (MQ=255) aaGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCAcc < 5:232470/149‑1 (MQ=255) tttttGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTac < 7:154506/149‑1 (MQ=255) gAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAg < 6:175144/122‑1 (MQ=255) gAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAg > 5:175144/1‑122 (MQ=255) acacCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTgg < 6:326374/149‑1 (MQ=255) cacCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTggg < 6:95145/149‑1 (MQ=255) acCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGt > 8:37769/1‑149 (MQ=255) gCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGccc < 1:156664/149‑1 (MQ=255) gCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACgg < 5:320918/149‑1 (MQ=255) aCCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCAt < 7:169564/149‑1 (MQ=255) ccgccCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAggtg > 3:289974/1‑149 (MQ=255) cgccCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAggtgg > 2:43592/1‑149 (MQ=255) cccGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCTGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGtt < 1:267735/149‑1 (MQ=255) cGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGtttt < 1:67166/149‑1 (MQ=255) cccGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCCGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCaa > 6:188298/1‑148 (MQ=255) ccGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCg < 8:52057/100‑1 (MQ=255) ccGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCg > 7:52057/1‑100 (MQ=255) cGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAg < 1:43592/149‑1 (MQ=255) cacTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCTACAGATATTgc < 5:167725/149‑1 (MQ=255) acTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTGCAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTgcg > 6:203486/1‑149 (MQ=255) ttgggcgcgacacctgggggcgacggtgataggggtggtatcgcgccCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGt > 7:258289‑M2/48‑148 (MQ=255) aGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGAt > 6:312949/1‑149 (MQ=255) ggcgcgacacctgggggcgacggtgataggggtggtatcgcgccCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGAtt > 6:279666‑M2/45‑149 (MQ=255) cgcgacacctgggggcgacggtgataggggtggtatcgcgccCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTcc < 5:279666‑M2/107‑1 (MQ=255) GCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTccc > 7:37769‑M1/1‑149 (MQ=255) CGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCt < 1:149504‑M1/149‑1 (MQ=255) CGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCt > 2:232976‑M1/1‑149 (MQ=255) caccCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGt < 2:160705/135‑1 (MQ=255) caccCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGt > 1:160705/1‑135 (MQ=255) accCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCTTGAACAg > 5:237/1‑149 (MQ=255) ccTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACCACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCTTGAACAGCAc > 2:333870/1‑149 (MQ=255) aTCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAg < 7:277727/116‑1 (MQ=255) aTCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAg > 8:277727/1‑116 (MQ=255) gTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGGTGGCCCAAAGCACCGGCCGCAGCGTACAAGTACACCTGGGTGCCGGGCCGTACGGCATTGGTGGTTTTGCAGAGTTATTGCTCCGTGATTCGCTTTAACAGGACCGGTgcggc < 6:261896/149‑1 (MQ=255) gTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCTTGAACAGCACCGCTgcggc > 1:73354/1‑149 (MQ=255) cccccAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTGCAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCTTGAACAGCACCGCTGCGGCGGcc < 5:203486/149‑1 (MQ=255) ccccAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCTTGAACAGCAc < 4:188428/135‑1 (MQ=255) ccccAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCTTGAACAGCAc > 3:188428/1‑135 (MQ=255) ggTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCTTGAACAGCACCGCTGCGGCGGCCTCGtcc < 8:115841/149‑1 (MQ=255) ggTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGGGATTCCCTTGAACAGCACCGCTGCGGCGGCCTCGtcc > 3:198062/1‑149 (MQ=255) tgtCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCTTGAACAGCACCGCTGCGGCGGCCTCGtcctc < 4:289974/149‑1 (MQ=255) tgtCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCTTGAACAGCACCGCTGCGGCGGCCTCGtcctc < 1:333870/149‑1 (MQ=255) gcgccCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCTTGAACAGCACCGCTGCGGCGGCCTCGTCCTCCAAc < 6:237‑M2/144‑1 (MQ=255) | CTTGGCCTTGGGTCAGCTCACGCACCTGGCTGGCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACCGTACAACAACACCTGGGTGCCCGGCCCTACGGCATAGGTGGTTTTCAACAGATATTGCGCCGTGATTCCCTTGAACAGCACCGCTGCGGCGGCCTCGTCCTCCAAC > NC_002947/4098068‑4098357 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |