New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4504474 =	73 (1.320)	5 (0.090)	5/248	NT	6.7%	coding (232/360 nt)	PP_3994	TusC‑like tRNA 2‑thiouridine(34) synthase
	?	NC_002947	4504519 =	68 (1.270)					coding (277/360 nt)	PP_3994	TusC‑like tRNA 2‑thiouridine(34) synthase

TGTGTTCCAGCTCGCGCCGGACCAGCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGCGACGAGCGCCTGGCCAGTTGCCTGCGC  >  NC_002947/4504374‑4504667                                                                                                                                                  |                                                                                                                                                       tgtgtTCCAGCTCGCGCCGGACCAGCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAAccc                                                                                                                                                     >  8:265272/1‑149 (MQ=255)    tgcagggtcttcatcagagcgttatcacctggtcgaaacgggctatcagggcggtcagcgctgcgtcatcgagcacttgcaccggcagcgccagggtTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTgg                                                                                                                                                  >  7:290319‑M1/98‑149 (MQ=255)     ttCCAGCTCGCGCCGGACCAGCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGgc                                                                                                                                                 >  6:180773/1‑149 (MQ=255)      cagggtcttcatcagagcgttatcacctggtcgaaacgggctatcagggcggtcagcgctgcgtcatcgagcacttgcaccggcagcgccagggtTTCGCCTGTAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGgc                                                                                                                                                 >  7:109291‑M1/96‑148 (MQ=255)          gCTCGCGCCGGACCAGCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGc                                                                                                                                            <  8:14234/149‑1 (MQ=255)            tCGCGCCGGACCAGCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCg                                                                                                                                          >  7:110051/1‑149 (MQ=255)                gcCGGACCAGCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGc                                                                                                                                      <  3:204815/149‑1 (MQ=255)                  cGGACCAGCAACCCGCCGCCGTGCAACTGCAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCaa                                                                                                                                    <  6:209529/149‑1 (MQ=255)                  cGGACCAGCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCaa                                                                                                                                    <  1:145291/149‑1 (MQ=255)                  cGGACCAGCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCaa                                                                                                                                    <  5:180773/149‑1 (MQ=255)                    gACCAGCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGt                                                                                                                                  <  1:109776/149‑1 (MQ=255)                        aGCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTc                                                                                                                              >  2:288379/1‑149 (MQ=255)                         gCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTc                                                                                                                              >  7:251204/1‑148 (MQ=255)                         gCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTc                                                                                                                              >  5:327736/1‑148 (MQ=255)                         gCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCg                                                                                                                             <  6:327736/149‑1 (MQ=255)                          cAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGa                                                                                                                            <  6:197863/149‑1 (MQ=255)                           aaCCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTg                                                                                                                                 >  5:262310/1‑143 (MQ=255)                           aaCCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTg                                                                                                                                 <  6:262310/143‑1 (MQ=255)                               cgccgccgTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCGACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑g                                                                                                                      >  2:329875/1‑149 (MQ=255)                                           aCAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCg                                                                                                          >  2:291987/1‑149 (MQ=255)                                             agaagaACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGcc                                                                                                        >  6:199148/1‑149 (MQ=255)                                              gaagaaCCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACAGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGccc                                                                                                       <  1:291987/149‑1 (MQ=255)                                               aagaaCCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAc                                                                                                                        <  7:164103/132‑1 (MQ=255)                                               aagaaCCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAc                                                                                                                        >  8:164103/1‑132 (MQ=255)                                                 gaaCCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGa                                                                                                    >  5:160119/1‑149 (MQ=255)                                                   aCCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATa                                                                                                  <  8:110051/149‑1 (MQ=255)                                                    ccTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCaa                                                                                                                                    >  3:104984/1‑115 (MQ=255)                                                    ccTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCaa                                                                                                                                    <  4:104984/115‑1 (MQ=255)                                                    ccTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAg                                                                                                 >  6:345554/1‑149 (MQ=255)                                                    ccTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAg                                                                                                 <  5:345554/149‑1 (MQ=255)                                                     cTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCCGCGGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGAGGAC‑GCAGCGCTGCCGGCCCTGAGAGc                                                                                                >  8:317841/1‑149 (MQ=255)                                                     cTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGc                                                                                                >  5:121214/1‑149 (MQ=255)                                                         ccgccAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGt                                                                                            >  8:305175/1‑149 (MQ=255)                                                         ccgccAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGt                                                                                            >  4:12335/1‑149 (MQ=255)                                                          cgccAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCTAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGtt                                                                                           <  7:147548/149‑1 (MQ=255)                                                           gccAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGttt                                                                                          <  8:251204/149‑1 (MQ=255)                                                            ccAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGc                                                                                                >  2:34432/1‑142 (MQ=255)                                                            ccAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGc                                                                                                <  1:34432/142‑1 (MQ=255)                                                              aaCCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGa                                                                                       >  6:335235/1‑149 (MQ=255)                                                                   gCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGTCCGTTTCGACCAgg                                                                                  >  2:259191/1‑149 (MQ=255)                                                                       gCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GAt                                                                             <  7:265272/149‑1 (MQ=255)                                                                          ttGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAg                                                                                   >  4:178553/1‑141 (MQ=255)                                                                          ttGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAg                                                                                   <  3:178553/141‑1 (MQ=255)                                                                             ccGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGct                                                                       <  5:335235/149‑1 (MQ=255)                                                                                  gTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGAcc                                                                                     <  3:295573/131‑1 (MQ=255)                                                                                  gTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGAcc                                                                                     >  4:295573/1‑131 (MQ=255)                                                                                  gTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCtgat                                                                  >  7:214369/1‑149 (MQ=255)                                                                                          tCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGAccc                                                          >  5:31775/1‑149 (MQ=255)                                                                                            gaagaaCTGTTCGCCTGCTACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCt                                                         <  1:329875/148‑1 (MQ=255)                                                                                            gaagaaCTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCt                                                         >  7:220847/1‑148 (MQ=255)                                                                                            gaagaaCTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTg                                                        >  1:315501/1‑149 (MQ=255)                                                                                             gccagggtttcggctgccaggccacggcgggccaggctgtggttacaggcgaaACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTg                                                        >  7:109291‑M2/54‑148 (MQ=255)                                                                                             aagaaCTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGGAGACCCTGc                                                       <  6:160119/149‑1 (MQ=255)                                                                                             aagaaCTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGc                                                       <  6:121214/149‑1 (MQ=255)                                                                                              ccagggtttcggctgccaggccacggcgggccaggctgtggttgcaggcgaaACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCa                                                      >  7:290319‑M2/53‑149 (MQ=255)                                                                                              agaaCTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCtgat                                                                  <  6:228241/137‑1 (MQ=255)                                                                                              agaaCTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCtgat                                                                  >  5:228241/1‑137 (MQ=255)                                                                                               gaaCTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCAt                                                     <  6:31775/149‑1 (MQ=255)                                                                                                aaCTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGAt                                                                                                                           <  5:354468/80‑1 (MQ=255)                                                                                                aaCTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGAt                                                                                                                           >  6:354468/1‑80 (MQ=255)                                                                                                aaCTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATg                                                    <  5:27714/149‑1 (MQ=255)                                                                                                        ggctgccaggccacggcgggccaggctgtggttgcaggcgaaACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATa                                                                            >  2:95617‑M2/43‑117 (MQ=255)                                                                                                        ggctgccaggccacggcgggccaggctgtggttgcaggcgaaACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATa                                                                            <  1:95617‑M2/75‑1 (MQ=255)                                                                                                        GCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGctct                                                                     >  3:329116‑M1/1‑124 (MQ=255)                                                                                                        GCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGctct                                                                     <  4:329116‑M1/124‑1 (MQ=255)                                                                                                        GCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGc                                             >  1:288379‑M1/1‑148 (MQ=255)                                                                                                        GCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGc                                             >  5:199148‑M1/1‑148 (MQ=255)                                                                                                                ccACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTcccc                                    >  2:259603/1‑149 (MQ=255)                                                                                                                  acaGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGt                                  >  1:300119/1‑149 (MQ=255)                                                                                                                   caGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGtt                                 >  5:304210/1‑149 (MQ=255)                                                                                                                    aGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGTCCGTTTCGACCAGGTCGATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGtt                                 <  1:259191/149‑1 (MQ=255)                                                                                                                     gCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTg                               <  8:220847/149‑1 (MQ=255)                                                                                                                      ccTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTgg                              >  2:130683/1‑149 (MQ=255)                                                                                                                      ccTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGAGGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTgg                              >  7:15231/1‑149 (MQ=255)                                                                                                                       cTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGc                             <  8:214369/149‑1 (MQ=255)                                                                                                                       cTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGc                             >  4:299522/1‑149 (MQ=255)                                                                                                                          gCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGcgac                          >  6:203368/1‑149 (MQ=255)                                                                                                                                    tggttacaggcgaaACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGCGACGAGCGCCTgg                <  8:109291‑M2/135‑1 (MQ=255)                                                                                                                                    gCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGCGACGAGCGCCTg                 <  4:252674/148‑1 (MQ=255)                                                                                                                                        ggCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGCGACGAGCGCCTGGCCAg            >  5:110712/1‑149 (MQ=255)                                                                                                                                         gCAGCCGCAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAAGTGACCATTCCCCGTTTGGCGACGAGCGCCTGGACAGt           >  8:121810/1‑149 (MQ=255)                                                                                                                                         gCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGACGGCAGCGCTGACCGCCCTGATAGCCCGTTTCGCCCAGGT‑GATAACGCTCTGATGAACACCCTGCATGTAATTGCCCATTCCCCGTTTGGCGACGAGCGCCTGGc               >  1:249472/1‑146 (MQ=255)                                                                                                                                         gCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGCGACGAGCGCCTGGc               <  2:249472/145‑1 (MQ=255)                                                                                                                                          cAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGCGACGAGCGCCTGGCCAGtt          <  2:219910/149‑1 (MQ=255)                                                                                                                                              cgaaACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGCGACGAGCGCCTGGCCAGTTGCCt      <  8:290319‑M2/145‑1 (MQ=255)                                                                                                                                                 aACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGCGACGAGCGCCTGGCCAGTTGCCTgcg   <  3:12335‑M2/148‑1 (MQ=255)                                                                                                                                                 aACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGCGACGAGCGCCTCGCCAGTTGCCTgcg   <  7:305175‑M2/148‑1 (MQ=255)                                                                                                                                                  aCCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGCGACGAGCGCCTGGCCAGTTgcctgcgc  <  2:315501/149‑1 (MQ=255)                                                                                                                                                  aCCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGCGACGAGCGCCTGGCCAGTTgcctgcgc  <  3:299522/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                       TGTGTTCCAGCTCGCGCCGGACCAGCAACCCGCCGCCGTGCAACAGAAGAACCTGGCCGCCAACCTGCAGGCGTTGCCGATGTTCGGTGTCGAAGAACTGTTCGCCTGCAACCACAGCCTGGCCCGCCGTGGCCTGGCAGCCGAAACCCTGGCGCTGCCGGTGCAAGTGCTCGATGAC‑GCAGCGCTGACCGCCCTGATAGCCCGTTTCGACCAGGT‑GATAACGCTCTGATGAAGACCCTGCATGTAATTGCCCATTCCCCGTTTGGCGACGAGCGCCTGGCCAGTTGCCTGCGC  >  NC_002947/4504374‑4504667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.