New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4951669 =	53 (0.960)	3 (0.060)	3/248	NT	5.4%	coding (604/1266 nt)	fliK	flagellar hook‑length control protein FliK
	?	NC_002947	4951723 =	54 (1.010)					coding (550/1266 nt)	fliK	flagellar hook‑length control protein FliK

TCAGGCCGTCTTCAAGCAAGGCACCAAAGGCCTTGCCACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGTTTGCGCCGTGGCC  >  NC_002947/4951576‑4951868                                                                                                                                                    |                                                                                                                                                  aggaggccttcgatccggatgctgaccccctggccaacctgccgaccctgcgcctggcgctggagcacagtgcccaggccaaggggggcacctCGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAg                                                                                                                                                  >  3:123072‑M1/94‑149 (MQ=255)   aGGCCGTCTTCAAGCAAGGCACCAAAGGCCTTGCCACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGt                                                                                                                                                >  1:329934/1‑149 (MQ=255)   aGGCCGTCTTCAAGCAAGGCACCAAAGGCCTTGCCACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGt                                                                                                                                                <  6:335387/149‑1 (MQ=255)     gCCGTCTTCAAGCAAGGCACCAAAGGCCTTGCCACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGc                                                                                                                                              <  8:22747/149‑1 (MQ=255)           ttCAAGCAAGGCACCAAAGGCCTTGCCACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCt                                                                                                                                        >  3:180005/1‑149 (MQ=255)                 caagGCACCAAAGGCCTTGCCACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCt                                                                                                                                  <  6:3514/149‑1 (MQ=255)                    gtcACCAAAGGCCTTGCCACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTggg                                                                                                                               <  7:312322/147‑1 (MQ=255)                    ggCACCAAAGGCCTTGCCACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTggg                                                                                                                               <  1:85206/149‑1 (MQ=255)                      cACCAAAGGCCTTGCCACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCa                                                                                                                             >  1:353707/1‑149 (MQ=255)                                cTTGCCACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCACCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGcc                                                                                                                                             <  4:143654/123‑1 (MQ=255)                                cTTGCCACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCACCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGcc                                                                                                                                             >  3:143654/1‑123 (MQ=255)                                    ccACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAgcgc                                                                                                               >  8:38963/1‑149 (MQ=255)                                     cACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGc                                                                                                                       >  6:79527/1‑140 (MQ=255)                                     cACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGc                                                                                                                       <  5:79527/140‑1 (MQ=255)                                      aCCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAgcgc                                                                                                               >  1:54961/1‑147 (MQ=255)                                               aGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAggg                                                                                                    >  3:86313/1‑149 (MQ=255)                                                   cTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCgg                                                                                                <  2:353707/149‑1 (MQ=255)                                                         ccATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGtt                                                                                          >  6:303806/1‑149 (MQ=255)                                                                tATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAgg                                                                                   >  8:201586/1‑149 (MQ=255)                                                                    cTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGt                                                                               >  6:323879/1‑149 (MQ=255)                                                                       gACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCa                                                                             <  2:54961/148‑1 (MQ=255)                                                                       gACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCa                                                                             <  5:174292/148‑1 (MQ=255)                                                                         ccAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAg                                                                                                      <  4:287020/121‑1 (MQ=255)                                                                         ccAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAg                                                                                                      >  3:287020/1‑121 (MQ=255)                                                                         ccAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGc                                                                           >  2:161117/1‑148 (MQ=255)                                                                             aTTCGCCTAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCg                                                                      >  8:101614/1‑149 (MQ=255)                                                                             aTTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCg                                                                      >  5:53577/1‑149 (MQ=255)                                                                              ttCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCgg                                                                     <  2:329934/149‑1 (MQ=255)                                                                                 gCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGAt                                                                   <  7:15300/148‑1 (MQ=255)                                                                                   cAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATc                                                                        >  7:152640/1‑141 (MQ=255)                                                                                   cAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATc                                                                        <  8:152640/141‑1 (MQ=255)                                                                                   cAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCg                                                                 >  6:340767/1‑148 (MQ=255)                                                                                      ggTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAgg                                                             <  4:86313/149‑1 (MQ=255)                                                                                       gTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGc                                                            >  5:332131/1‑149 (MQ=255)                                                                                        tATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCa                                                                             >  3:152317/1‑131 (MQ=255)                                                                                        tATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCa                                                                             <  4:152317/131‑1 (MQ=255)                                                                                        tATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGcc                                                           >  6:222626/1‑149 (MQ=255)                                                                                            gACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGcctcct                                                       >  8:182854/1‑149 (MQ=255)                                                                                            ctcggcacatgcccttgatgctgcccaggctcagggcgaggaagggcaggcggccgAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGcctcct                                                       >  3:123072‑M2/57‑149 (MQ=255)                                                                                                 cacatgcccttgatgctgcccaggctcagggcgaggaagggcaggcggccgAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTcggcg                                                  <  4:123072‑M2/98‑1 (MQ=255)                                                                                                 CCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTcggcg                                                  >  7:201586‑M1/1‑149 (MQ=255)                                                                                                        ccttgatgctgcccaggctcagggcgaggaagggcaggcggccgAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGct                                           >  3:280241‑M2/45‑149 (MQ=255)                                                                                                        cccTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACgg                                             <  1:161117/147‑1 (MQ=255)                                                                                                              cTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAg                                     <  5:222626/149‑1 (MQ=255)                                                                                                               tCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAgg                                    >  5:32492/1‑149 (MQ=255)                                                                                                               tCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAgg                                    >  7:81259/1‑149 (MQ=255)                                                                                                                 gCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAgg                                    <  6:53577/147‑1 (MQ=255)                                                                                                                   ccTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGGAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGt                                >  7:84404/1‑149 (MQ=255)                                                                                                                    cTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGtg                               <  8:84404/149‑1 (MQ=255)                                                                                                                       aGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGtgctg                            >  5:1458/1‑149 (MQ=255)                                                                                                                         ccTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTc                                                                              <  8:281658/97‑1 (MQ=255)                                                                                                                         ccTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTc                                                                              >  7:281658/1‑97 (MQ=255)                                                                                                                              gcagcaTCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAAc                     <  5:303806/149‑1 (MQ=255)                                                                                                                                  caTCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTgg                 >  6:257703/1‑149 (MQ=255)                                                                                                                                    tCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGt               <  4:180005/149‑1 (MQ=255)                                                                                                                                      aaGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGttt             <  5:257703/149‑1 (MQ=255)                                                                                                                                       aGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGTTTg            >  3:139058/1‑149 (MQ=255)                                                                                                                                        gggCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGTTTgc           <  5:323879/149‑1 (MQ=255)                                                                                                                                        gggCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGTTTgc           <  4:139058/149‑1 (MQ=255)                                                                                                                                        gggCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGTTTgc           <  8:81259/149‑1 (MQ=255)                                                                                                                                         ggCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGAGCCAGGCGCACGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGTGTTTgcg          >  2:148106/1‑149 (MQ=255)                                                                                                                                             gcggccgAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGTTTGCGCCGt      <  4:280241‑M2/142‑1 (MQ=255)                                                                                                                                               tgCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGTTTGCGCCGTgg    <  6:1458/149‑1 (MQ=255)                                                                                                                                               tgCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGTTTGCGCCGTg     <  7:101614/148‑1 (MQ=255)                                                                                                                                                gccgAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGTTTgc           <  7:234114‑M2/137‑1 (MQ=255)                                                                                                                                                gccgAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGTTTgc           >  8:234114‑M2/5‑141 (MQ=255)                                                                                                                                                 ccgAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGTTTGCGCCGTGgcc  >  6:24088‑M2/4‑149 (MQ=255)                                                                                                                                                 ccgAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGTTTGCGCCGTGgc   <  7:38963‑M2/145‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                  TCAGGCCGTCTTCAAGCAAGGCACCAAAGGCCTTGCCACCGGATTCAGCGCTTTCGCCATCGGTATCCTCGACCAGATTCGCCAAGGTATTGACGGCCGCCTGCCCTTCCTCGCCCTGAGCCTGGGCAGCATCAAGGGCATGTGCCGAGGTGCCCCCCTTGGCCTGGGCACTGTGCTCCAGCGCCAGGCGCAGGGTCGGCAGGTTGGCCAGGGGGTCAGCATCCGGATCGAAGGCCTCCTCGGCGGACGGCTCTTCAGGCAGTGCTGCGGAAACCTGGGTTTGCGCCGTGGCC  >  NC_002947/4951576‑4951868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.