New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5895417 =	61 (1.100)	4 (0.070)	4/248	NT	5.8%	coding (759/819 nt)	cysU	sulfate ABC transporter permease CysT
	?	NC_002947	5895454 =	72 (1.340)					coding (722/819 nt)	cysU	sulfate ABC transporter permease CysT

GTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGTGAGCCATGCC  >  NC_002947/5895307‑5895594                                                                                                                                                    |                                                                                                                                             gcccgtggcgtgggcgagtatggttcggtgatcttcattgccggcaacatgccgatgaagaccgagattctgccgctgctgatcatggtcaagctcgaccagtacgactaCACCAGCATCAACACGCCGATGGCGGTCGCGCCGgtgt                                                                                                                                              >  4:193203‑M1/111‑148 (MQ=255)       tGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTa                                                                                                                                       >  8:163036/1‑149 (MQ=255)         cgtgggcgagtatggttcggtgatcttcattgccggcaacatgccgatgaagaccgagattctgccgctgctgatcatggtcaagctcgaccagtacgactaCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACt                                                                                                                                     >  4:265387‑M1/103‑149 (MQ=255)            cACTTGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCATGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGt                                                                                                                                  <  4:116273/149‑1 (MQ=255)               ttGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTc                                                                                                                                 >  7:111472/1‑147 (MQ=255)                tGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAg                                                                                                                              >  8:159150/1‑149 (MQ=255)                  cACTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCt                                                                                                                            >  6:159641/1‑149 (MQ=255)                    cTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTg                                                                                                                          <  5:159641/149‑1 (MQ=255)                       aGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGAcc                                                                                                                       <  5:359082/149‑1 (MQ=255)                         ggATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTg                                                                                                                          <  6:218341/144‑1 (MQ=255)                         ggATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTg                                                                                                                          >  5:218341/1‑144 (MQ=255)                           aTGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATg                                                                                                                    >  8:108738/1‑148 (MQ=255)                              aaCTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGAt                                                                                                                  >  2:121742/1‑147 (MQ=255)                                   gACATGCCGGCCTCCTTCAAGTGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATcagca                                                                                                             <  5:98036/147‑1 (MQ=255)                                     cATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCg                                                                                                                                         <  7:194716/117‑1 (MQ=255)                                     cATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCg                                                                                                                                         >  2:191139/1‑117 (MQ=255)                                     cATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCg                                                                                                                                         <  1:191139/117‑1 (MQ=255)                                     cATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCg                                                                                                                                         >  8:194716/1‑117 (MQ=255)                                      aTGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCgg                                                                                                         >  6:368240/1‑148 (MQ=255)                                            gCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCGGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAAtc                                                                                                  >  3:10530/1‑149 (MQ=255)                                             cctcctTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAAtct                                                                                                 >  8:303677/1‑149 (MQ=255)                                               tcctTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCg                                                                                               >  8:71860/1‑149 (MQ=255)                                                 ctTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGAcc                                                                                                                       >  6:78705/1‑123 (MQ=255)                                                 ctTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGAcc                                                                                                                       <  5:78705/123‑1 (MQ=255)                                                 atgccgatgaagaccgagattctgccgctgctgatcatggtcaagctcgaccagtacgactaCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTa                                                                                                                                             <  5:225082‑M1/39‑1 (MQ=255)                                                  ttCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTc                                                                                            >  3:44175/1‑149 (MQ=255)                                                  ttCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTc                                                                                            >  4:3250/1‑149 (MQ=255)                                                    cAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCt                                                                                           <  7:303677/148‑1 (MQ=255)                                                     aaGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCtt                                                                                          >  8:209433/1‑148 (MQ=255)                                                      aGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTc                                                                                         >  3:325469/1‑148 (MQ=255)                                                        gggTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGAt                                                                                                                  >  3:332807/1‑121 (MQ=255)                                                        gggTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGAt                                                                                                                  <  4:332807/121‑1 (MQ=255)                                                         ggTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCg                                                                                     <  7:209433/149‑1 (MQ=255)                                                           tttCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATcagc                                                                                                              >  8:241735/1‑122 (MQ=255)                                                           tttCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATcagc                                                                                                              <  7:241735/122‑1 (MQ=255)                                                                aTGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGtt                                                                              >  4:46638/1‑149 (MQ=255)                                                                 tGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTg                                                                             >  4:41876/1‑149 (MQ=255)                                                                           cagcagGTTGATCAGCAGCAGCGGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATg                                                                    <  4:10530/148‑1 (MQ=255)                                                                           cagcagGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATg                                                                    <  1:121742/148‑1 (MQ=255)                                                                             gcagGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATg                                                                    >  1:92838/1‑146 (MQ=255)                                                                             gcagGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATg                                                                    >  4:176714/1‑146 (MQ=255)                                                                             gcagGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGaa                                                                  <  3:176714/148‑1 (MQ=255)                                                                             gcagGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAg                                                                 <  5:368240/149‑1 (MQ=255)                                                                                ggTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGAt                                                               >  7:289970/1‑148 (MQ=255)                                                                                 gTTGATCAGCAGCAGCAGGATGAAGGGAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCa                                                             >  7:152079/1‑149 (MQ=255)                                                                                 gTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCa                                                             >  8:210766/1‑149 (MQ=255)                                                                                  ttGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCAc                                                            <  3:215267/149‑1 (MQ=255)                                                                                     aTCAGCAGCAGAAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCg                                                          >  2:214775/1‑148 (MQ=255)                                                                                        agcagcagcagGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAAc                                                       <  7:108738/148‑1 (MQ=255)                                                                                          cagcagcagGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGt                                                                                             >  1:171046/1‑108 (MQ=255)                                                                                          cagcagcagGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGt                                                                                             <  2:171046/108‑1 (MQ=255)                                                                                                     agtacgactacaccggcgcgaccgccatcggcgtgttgatgctggtgTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCccacg                                         >  4:265387‑M2/48‑149 (MQ=255)                                                                                                       aaGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCg                                                          >  6:214367/1‑130 (MQ=255)                                                                                                       aaGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCg                                                          <  5:214367/130‑1 (MQ=255)                                                                                                           aaaCCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACgg                                   <  8:289970/149‑1 (MQ=255)                                                                                                           aaaCCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACgg                                   <  3:3250/149‑1 (MQ=255)                                                                                                            aaCCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACggg                                  >  7:272893/1‑149 (MQ=255)                                                                                                             tacaccggcgcgaccgccatcggcgtgttgatgctggtgTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCAt                                                                                 <  5:225082‑M2/62‑1 (MQ=255)                                                                                                              acaccggcgcgaccgccatcggcgtgttgatgctggtgTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGc                                 >  4:193203‑M2/39‑148 (MQ=255)                                                                                                                 CCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAg                             >  7:210766‑M1/1‑149 (MQ=255)                                                                                                                     cATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGc                           >  6:98557/1‑147 (MQ=255)                                                                                                                       tCAACACGCCGATGGCGGTCGCGCCGGAGTAGTCGTACTGCTCGAGCATGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCACACGCCAAGGGCGAAGGCCAgg                       >  1:24564/1‑149 (MQ=255)                                                                                                                        cAACACGACGTTGGCGGTCGCGCCGTTGTATTAGTACTGGTCGAGCTTGACCTTGATCAGCAGCGGCAGTATCTCGGTCTTCATCGGAATGTTGCCGGCAATGAAGATGACCGAACCATACTCGCCCACGCCACGTTCGAAGGCCAgg                       <  2:92838/148‑1 (MQ=255)                                                                                                                         aaCACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAggg                      <  3:41876/148‑1 (MQ=255)                                                                                                                         aaCACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAggg                      <  4:325469/148‑1 (MQ=255)                                                                                                                         aaCACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAggg                      >  3:223481/1‑148 (MQ=255)                                                                                                                          acacGCCGATGGTGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCa                                                                                  <  1:102261/87‑1 (MQ=255)                                                                                                                          acacGCCGATGGTGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCa                                                                                  >  2:102261/1‑87 (MQ=255)                                                                                                                           cacGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCa                    >  6:216388/1‑148 (MQ=255)                                                                                                                            acGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCa                    >  6:40591/1‑147 (MQ=255)                                                                                                                             cGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAg                 <  8:111472/149‑1 (MQ=255)                                                                                                                              gCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGc                <  3:46638/149‑1 (MQ=255)                                                                                                                              gCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAAACATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGc                >  5:167850/1‑149 (MQ=255)                                                                                                                              catcggcgtgttgatgctggtgTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGc                <  3:193203‑M2/127‑1 (MQ=255)                                                                                                                                  aTGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGt            <  5:216388/149‑1 (MQ=255)                                                                                                                                   tGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGTg           <  7:159150/149‑1 (MQ=255)                                                                                                                                     gCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGTGa          <  4:44175/148‑1 (MQ=255)                                                                                                                                      cGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGTGAGc        >  5:283834/1‑149 (MQ=255)                                                                                                                                      cGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGTGAGc        <  8:272893/149‑1 (MQ=255)                                                                                                                                       ggTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGTGAGcc       <  5:40591/149‑1 (MQ=255)                                                                                                                                           gcgcCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGTGAGCCATGc   >  4:107788/1‑149 (MQ=255)                                                                                                                                            cgcCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGTGAGCCATGcc  >  5:66915/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                             GTTGGCTGCGGCACTTGCACTCAGGGATGAACTGGACATGCCGGCCTCCTTCAAGGGGTTTCGATGCGGCGCTGCAGCAGGTTGATCAGCAGCAGCAGGATGAAGGAAACCACCAGCATCAACACGCCGATGGCGGTCGCGCCGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGTGAGCCATGCC  >  NC_002947/5895307‑5895594

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.