New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5389423 =	7 (0.220)	15 (0.500)	14/276	1.3	69.2%	intergenic (+122/‑198)	dld2/PP_4738	D‑lactate dehydrogenase/hypothetical protein
	?	NC_002947	5453014 =	NA (NA)					intergenic (+27/‑328)	lnt/PP_4791	apolipoprotein N‑acyltransferase/transposase

TCATGGCCGCTGGCGATTGTCTGTGCATTGCTGCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGT  >  NC_002947/5452910‑5453151                                                                                                         |                                                                                                                                          tCATGGCCGCTGGCGATTGTCTGTGCATTGCTGCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGa                                                                                                >  4:7972/1‑148 (MQ=255)  cATGGCCGCTGGCGATTGTCTGTGCATTGCTGCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAg                                                                                               <  4:140401/148‑1 (MQ=255)   aTGGCCGCTGGCGATTGTCTGTGCATTGCTGCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAgg                                                                                              >  8:72491/1‑148 (MQ=255)   aTGGCCGCTGGCGATTGTCTGTGCATTGCTGCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAgg                                                                                              >  2:111409/1‑148 (MQ=255)   aTGGCCGCTGGCGATTGTCTGTGCATTGCTGCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAgg                                                                                              >  8:24854/1‑148 (MQ=255)             gCGATTGTCTGTGCATTGCTGCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCtt                                                                                    <  6:164591/148‑1 (MQ=255)               gATTGTCTGTGCATTGCTGCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCa                                                                                  >  8:137746/1‑148 (MQ=255)               gATTGTCTGTGCATTGCTGCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCa                                                                                  <  6:143544/148‑1 (MQ=255)               gATTGTCTGTGCATTGCTGCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCa                                                                                  >  5:159359/1‑148 (MQ=255)                        tgCATTGCTGCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAg                                                                         >  4:139097/1‑148 (MQ=255)                         gCATTGCTGCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCa                                                                          <  3:158668/146‑1 (MQ=255)                                               tGCTGGCAGGGCTTATTGATAATACGGTTTGATTGACGATACGCGTGCACTTTAGGAGATTTCCCAGCCCTTTCGGTCTGCGCTGTCTCGCAGCATACTTGAGGTTTAGGGCTTCAGTTCCGCAGCGAGGCTGAGATTTTGaatatga                                                  <  4:6415/148‑6 (MQ=12)                                                  tGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAAAAAGAGGTGTAAGGCTTCAGTTCCGCAGCGACGCGGACATTTTGAaaaagaaaa                                               >  1:68478/1‑148 (MQ=255)                                                                     aaCCGGCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAACGGCGGTTGGCCCGGTAggg                            <  4:52294/148‑1 (MQ=255)                                                                         gTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAg                        >  7:104131/1‑148 (MQ=255)                                                                         gTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCGTCCGGGCTGCGCTGTCGCGCAGCAACCATGAGGTGTACGGCTGCAGTTCCGCAGCGACGCTGCCATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAggcgcag                        >  5:173893/1‑143 (MQ=17)                                                                            tGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAgccg                     <  3:139097/148‑1 (MQ=255)                                                                                           gACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTa      <  7:72491/148‑1 (MQ=33)                                                                                            aCCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCttttcttt           >  2:113848/1‑138 (MQ=11)                                                                                             ccACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCttttctttt          <  1:113848/142‑6 (MQ=11)                                                                                               aCTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGt  >  3:131946/1‑148 (MQ=11)                                                                                                         |                                                                                                                                          TCATGGCCGCTGGCGATTGTCTGTGCATTGCTGCTGGGCTGGGCGTTGCTGGCAGGGCGTATTGCAAAAACCGTCTGATTGACGATACGCGACCACTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGT  >  NC_002947/5452910‑5453151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.