New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 28428 = | 39 (0.740) | 3 (0.060) | 3/244 | NT | 7.5% | coding (1120/1698 nt) | PP_0024 | membrane‑associated metal‑dependent hydrolase |
? | NC_002947 | 28458 = | 37 (0.730) | coding (1090/1698 nt) | PP_0024 | membrane‑associated metal‑dependent hydrolase |
GACGTGCTTCAACGCGCTGGCATCAGTGTCATGTGGACTGACAACAACTCGGGGTGCAAAGGGGTCTGCGACAGGGTTCCCAACCACAAGGCTGCCTCTCACGCGGATTCCCAACTGTGCACCAGCGAGGAGTGTAAGGACGGGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/28575‑28428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcACAGTTGGGAATCCGCGTGAGAGGCAGCCTTGTGGTTGGGAACCCTGTCGCAGACCCCTTTGCACCCCGAGTTGTTGTCAGTCCACATGACACTGATGCCAGCGCGTTGAAGCACGTCGAGCAGCCCTTCTCGGCTCTTGGCCAAGC > NC_002947/28458‑28604 GACGTGCTTCAACGCGCTGGCATCAGTGTCATGTGGACTGACAACAACTCGGGGTGCAAAGGGGTCTGCGACAGGGTTCCCAACCACAAGGCTGCCTCTCACGCGGATTCCCAACTGTGCACCAGCGAGGAGTGTAAGGACGGGGTGC < 2:50399/148‑1 CCAACTGTGCACCAGCGAGGAGTGTAAGGACGGGGTGCACAGTTGGGAATCCGCGTGAGAGGCAGCCTTGTGGTTGGGAACCCTGTCGCAGACCCCTTTGCACCC < 1:39860/105‑1 CCAACTGTGCACCAGCGAGGAGTGTAAGGACGGGGTGCACAGTTGGGAATCCGCGTGAGAGGCAGCCTTGTGGTTGGGAACCCTGTCGCAGACCCCTTTGCACCC > 2:39860/1‑105 ACTGTGCACCAGCGAGGAGTGTAAGGACGGGGTGCACAGTTGGGAATCCGCGTGAGAGGCAGCCTTGTGGTTGGGAACCCTGTCGCAGACCCCTTTGCACCCCGAGTTGTTGTCAGTCCACATGACACTGATGCCAGCGCGTTGAAGCA > 6:147925/1‑149 GCACAGTTGGGAATCCGCGTGAGAGGCAGCCTTGTGGTTGGGAACCCTGTCGCAGACCCCTTTGCACCCCGAGTTGTTGTCAGTCCACATGACACTGATGCCAGCGCGTTGAAGCACGTCGAGCAGCCCTTCTCGGCTCTTGGCCAAGC > 4:22580/1‑149 GCACAGTTGGGAATCCGCGTGAGAGGCAGCCTTGTGGTTGGGAACCCTGTCGCAGACCCCTTTGCACCCCGAGTTGTTGTCAGTCCACATGACACTGATGCCAGCGCGTTGAAGCACGTCGAGCAGCCCTTCTCGGCTCTTGGCCAAGC > 7:1618/1‑149 CACAGTTGGGAATCCGCGTGAGAGGCAGCCTTGTGGTTGGGAACCCTGTCGCAGACCCCTTTGCACCCCGAGTTGTTGTCAGTCCACATGACACTGATGCCAGCGCGTTGAAGCACGTCGAGCAGCCCTTCTCGGCTCTTGGCCAAGC < 8:162090/148‑1 CACAGTTGGGAATCCGCGTGAGAGGCAGCCTTGTGGTTGGGAACCCTGTCGCAGACCCCTTCGCACCCCGAGTTGTTGTCAGTCCACATGACACTGATGCCAGCGCGTTGAAGCACGTCGATCAGCCCTTCTCGGCTCTTGGCCAAGC < 1:185419/148‑1 GACGTGCTTCAACGCGCTGGCATCAGTGTCATGTGGACTGACAACAACTCGGGGTGCAAAGGGGTCTGCGACAGGGTTCCCAACCACAAGGCTGCCTCTCACGCGGATTCCCAACTGTGCACCAGCGAGGAGTGTAAGGACGGGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/28575‑28428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcACAGTTGGGAATCCGCGTGAGAGGCAGCCTTGTGGTTGGGAACCCTGTCGCAGACCCCTTTGCACCCCGAGTTGTTGTCAGTCCACATGACACTGATGCCAGCGCGTTGAAGCACGTCGAGCAGCCCTTCTCGGCTCTTGGCCAAGC > NC_002947/28458‑28604 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |