| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 33457 = | 57 (1.080) | 3 (0.060) | 3/236 | NT | 5.5% | coding (565/675 nt) | czcR‑I | heavy metal two‑component system response regulator |
| ? | NC_002947 | 33502 = | 51 (1.040) | coding (610/675 nt) | czcR‑I | heavy metal two‑component system response regulator | |||||
CAACTTTTAACCCCAGCTTTGCAGCCAGGCTGAATGGCCTCATGCGCGTTCCTCAAAAACGTACCCAACGCCACGAAGCGTGTGAATGAGCTTGGTTTCAAACGGGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGATGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/33606‑33457‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgatgacCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCATTCAGCCTGGCTGCAAAGCTGGGGTTAAAAGTTGGGTTGATGAGCGCAGCGTTGCTGCTTCTGTTCGCCACCTTTGG > NC_002947/33502‑33649 CAACTTTTAACCCCAGCTTTGCAGCCAGGCTGAATGGCCTCATGCGCGTTCCTCAAAAACGTACCCAACGCCACGAAGCGTGTGAATGAGCTTGGTTTCAAACGGGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGA < 5:119364/146‑1CAACTTTTAACCCCAGCTTTGCAGCCAGGCTGAATGGCCTCATGCGCGTTCCTCAAAAACGTACCCAACGCCACGAAGCGTGTGAATGAGCTTGGTTTCAAACGGGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGA > 6:119364/1‑146 TTTAACCCCAGCTTTGCAGCCAGGCTGAATGGCCTCATGCGCGTTCCTCAAAAACGTACCCAACGCCACGAAGCGTGTGAATGAGCTTGGTTTCAAACGGGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGAT > 1:323978/1‑142 TTTAACCCCAGCTTTGCAGCCAGGCTGAATGGCCTCATGCGCGTTCCTCAAAAACGTACCCAACGCCACGAAGCGTGTGAATGAGCTTGGTTTCAAACGGGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGAT < 2:323978/142‑1 CAACGCCACGAAGCGTGTGAATGAGCTTGGTTTCAAACGGGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGAT < 7:236234/82‑1 CAACGCCACGAAGCGTGTGAATGAGCTTGGTTTCAAACGGGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGAT > 8:236234/1‑82 ACGGGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGATGACCCGTTTGAAACCAAGCTCATTCACAAGCTTCGTGGCGTTGGGTAGGTTTTTGAGGAACGCGCATGAGGCCATTCTGCCTGGCTGCAAAGCGGGGGTTAA > 6:260148/1‑148 GGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAAC < 5:94987/104‑1 GGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAAC > 6:94987/1‑104 CCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCATTCAGCCTGGCTGCAAAGCTGGGGTTAAAAGTTGGGTTGATGAGCGCAGCGTTGCTGCTTCTGTTCGCCACCTTTGG < 6:179487/149‑1 CCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCATTCAGCCTGGCTGCAAAGCTGGGGTTAAAAGTTGGGTTGATGAGCGCAGCGTTGCTGCTTCTGTTCGCCACCTTTGG < 6:37964/149‑1 CCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACCCGCATGAGGCAATTCAGCCTCGCTGCAAAGCTGGGGTTAAAAGTTGGGTTGATGAGCGCAGCGTTGCTGCTTCTGTTAGCCACCTTTGa > 4:42240/1‑148 CAACTTTTAACCCCAGCTTTGCAGCCAGGCTGAATGGCCTCATGCGCGTTCCTCAAAAACGTACCCAACGCCACGAAGCGTGTGAATGAGCTTGGTTTCAAACGGGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGATGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/33606‑33457‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgatgacCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCATTCAGCCTGGCTGCAAAGCTGGGGTTAAAAGTTGGGTTGATGAGCGCAGCGTTGCTGCTTCTGTTCGCCACCTTTGG > NC_002947/33502‑33649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |