| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 33457 = | 57 (1.080) | 3 (0.060) | 3/236 | NT | 5.5% | coding (565/675 nt) | czcR‑I | heavy metal two‑component system response regulator |
| ? | NC_002947 | 33502 = | 51 (1.040) | coding (610/675 nt) | czcR‑I | heavy metal two‑component system response regulator | |||||
TCGCGTCTTCCGCGGTGGCACACGCATCGATCTCACCACCAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCATTCAGCCTGGCTGCAAAGCTGGG > NC_002947/33309‑33595 | tcaaaggtggctaacagaagcagcaacgctgcgctcatcaacccaacttttaaccccagctttgcagcgaggctgaattgcctcatgcgggttcctcaaaaacgtacccaacgccacgaagcgtgtgaatgagcttggtttcaaacggg > 4:42240‑M1/149‑149 (MQ=255)ccaaaggtggcgaacagaagcagcaacgctgcgctcatcaacccaacttttaaccccagctttgcagccaggctgaatggcctcatgcgcgttcctcaaaaacgtacccaacgccacgaagcgtgtgaatgagcttggtttcaaacggg < 6:37964‑M1/1‑1 (MQ=255)ccaaaggtggcgaacagaagcagcaacgctgcgctcatcaacccaacttttaaccccagctttgcagccaggctgaatggcctcatgcgcgttcctcaaaaacgtacccaacgccacgaagcgtgtgaatgagcttggtttcaaacggg < 6:179487‑M1/1‑1 (MQ=255) acacGCATCGATCTCACCACCAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCg > 2:264428/1‑149 (MQ=255) gCATCGATCTCACCACCAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTa > 6:39051/1‑137 (MQ=255) gCATCGATCTCACCACCAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTa < 5:39051/137‑1 (MQ=255) gCATCGATCTCACCACCAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGgcgc > 2:332530/1‑149 (MQ=255) aTCGATCTCACCACAAAGGAATTTGCGATTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTACCAATCCGGCGCtt > 4:216283/1‑149 (MQ=255) tcACCACCAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGCGCGAAGCGCTGACTCGCTCTCAGATCATCACGTTGGTCTGGTATATGAATATCGATTGCGACACCAATGTCATCGATGTACCCAACCGGCGCTTGCGCTc > 8:146657/1‑148 (MQ=255) accaccAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCt < 1:264428/145‑1 (MQ=255) caccaAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAg < 6:130529/125‑1 (MQ=255) caccaAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAg > 5:130529/1‑125 (MQ=255) caccaAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCg > 6:143585/1‑145 (MQ=255) caccaAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCg > 2:62475/1‑145 (MQ=255) ccaAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCg > 8:302049/1‑143 (MQ=255) aGGATTTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCTATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGAt < 7:146657/149‑1 (MQ=255) aGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGAt < 1:332530/149‑1 (MQ=255) ttaacccccgctttgcagccaggcagaatggcctcatgcgcgttcctcaaaaacctacccaacgccacgaagcttgtgaatgagcttggtttcaaacggGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGt > 6:260148‑M1/100‑148 (MQ=255) ttCTGCACCTGCTCATGAGCCGAACGGGCGAATCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAACTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGaa < 2:87375/149‑1 (MQ=255) tCTTCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTATCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCTATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGaaa < 3:216283/149‑1 (MQ=255) cTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGaaa < 3:300972/148‑1 (MQ=255) cACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGa > 4:339029/1‑134 (MQ=255) cACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGa < 3:339029/134‑1 (MQ=255) ccTGCTCATGAGCCGTACTGGCGAAGAGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGATGATCGATGACCCGTTTGAAACCAAGc < 8:140620/149‑1 (MQ=255) tCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCAt > 2:324748/1‑148 (MQ=255) cATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGAATGGGAAATGAATTTAGATTTCGAAACCAATTTCATCCATGTAGCCATACCGCCCTTTCGCTCGAAGATAGAAGGCCCGTTTGAAACCAACCTCAtt > 1:87415/1‑148 (MQ=255) aTGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAg < 7:243573/141‑1 (MQ=255) aTGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAAAGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAg > 8:243573/1‑141 (MQ=255) gggCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTg < 2:87415/149‑1 (MQ=255) gAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGt > 4:6463/1‑149 (MQ=255) aaGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGtt < 1:62475/149‑1 (MQ=255) aaGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGtt > 1:14305/1‑149 (MQ=255) gcgcTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTgg < 3:6463/149‑1 (MQ=255) cTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTa > 5:179487/1‑149 (MQ=255) cTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTa > 1:190836/1‑149 (MQ=255) gttcctcaaaaacgtacccaacgccacgaagcgtgtgaatgagcttggtttcaaacggGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGAcc > 6:94987‑M1/59‑104 (MQ=255) gttcctcaaaaacgtacccaacgccacgaagcgtgtgaatgagcttggtttcaaacggGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGAcc < 5:94987‑M1/46‑1 (MQ=255) tCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTAACACGCTTCGTGGCGTTGGGTACGttt > 5:97773/1‑149 (MQ=255) gCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGttttt > 5:40874/1‑149 (MQ=255) ctctCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGttttt > 5:313819/1‑148 (MQ=255) tcAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGa < 2:14305/147‑1 (MQ=255) tcAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGa < 1:99943/147‑1 (MQ=255) tcAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGa < 5:143585/147‑1 (MQ=255) cAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCAtt < 5:115457/114‑1 (MQ=255) cAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCAtt > 6:115457/1‑114 (MQ=255) cAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAgg > 3:95375/1‑148 (MQ=255) atcTCGTTTGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAAcgcg < 5:238947/148‑1 (MQ=255) tcGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCAt > 5:358520/1‑148 (MQ=255) gTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAg < 2:14661/136‑1 (MQ=255) gTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGcc < 6:313819/148‑1 (MQ=255) tCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCAt > 3:322277/1‑149 (MQ=255) gATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCATTCAGc < 5:261277/149‑1 (MQ=255) atatGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGttt < 2:272543/77‑1 (MQ=255) atatGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGttt > 1:272543/1‑77 (MQ=255) tatGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGTGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCATTCAGCCt > 1:340379/1‑149 (MQ=255) tatGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCATTCAGc > 1:256108/1‑147 (MQ=255) tatGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCATTCAGc < 2:256108/147‑1 (MQ=255) tGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGTGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCATTCAGCCTg < 2:340379/148‑1 (MQ=255) aTTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCATTCAGCCTGGCTGCAAAGc > 6:284437/1‑149 (MQ=255) cGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCATTCAGCCTGGCTGCAAAGCTggg < 2:190836/149‑1 (MQ=255) cGACACCAATGTCATCGATGTAGCCATCCGGAGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGGTGGGTACGGTTTTGAGGAACGCGCATGAGGCCATTCAGCCTGGCTGCAAAGCTgg < 4:103351/148‑1 (MQ=255) gACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGa > 6:117045/1‑120 (MQ=255) gACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGa < 5:117045/120‑1 (MQ=255) | TCGCGTCTTCCGCGGTGGCACACGCATCGATCTCACCACCAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTCGTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGAGGCCATTCAGCCTGGCTGCAAAGCTGGG > NC_002947/33309‑33595 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |