| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 80502 | 46 (0.870) | 3 (0.060) | 3/238 | NT | 6.2% | coding (117/558 nt) | tsaC | threonylcarbamoyl‑AMP synthase |
| ? | NC_002947 | = 80527 | 47 (0.950) | coding (142/558 nt) | tsaC | threonylcarbamoyl‑AMP synthase | |||||
CACTGCGCACAAGCAAGGTATTCAGGCGGAGAAACAGCAATGGTGAGCAGTTTTCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/80347‑80502‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggacgcgACTTCAGCGCCAACAGGCGATACACCGCGTCCTCGTTCCATGGGTCGCAGCCCAGGCCCCAGACCGCTTCCGTCGGGTAGGCGATCACCGCGCCCGCCCGGATCTCACGTGCGGCTTGTTGCACACGAAAACTGCTCACCATTGCTGT < NC_002947/80527‑80380 CACTGCGCACAAGCAAGGTATTCAGGCGGAGAAACAGCAATGGTGAGCAGTTTTCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGA < 4:22542/149‑1 ACTGCGCACAAGCAAGGTATTCAGGCGGAGAAACAGCAATGGTGAGCAGTTTTCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAG > 7:69492/1‑149 CACAAGCAAGGTATTCAGGCGGAGAAACAGCAATGGTGAGCAGTTTTCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCG < 2:243122/149‑1 TGGTGAGCAGTTTTCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGACTTCAGCGCCAACAGGCGATACACCGCGTCCT < 2:72840/149‑1 CGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGACTTCAGCGCCAACAGGCGATACACCGCGTCCTC > 5:209172/1‑92 CGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCGACTTCAGCGCCAACAGGCGATACACCGCGTCCTC < 6:209172/92‑1 CGCGACTTCAGCGCCAACAGGCGATACACCGCGTCCTCGTTCCATGGGTCGCAGCCCAGGCCCCAGACCGCTTCCGTCGGGTAGGCGATCACCGCGCCCGCCCGGATCTCACGTGCGGCTTGTTGCACACGAAAACTGCTCACCATTGC < 5:215811/149‑1 GCGACTTCAGCGCCAACAGGCGATACACCGCGTCCTCGTTCCATGGGTCGCAGCCCAGGCCCCAGACCGCTTCCGTCGGGTAGGCGATCACCGCGCCCGCCCGGATCTCACGTGCGGCTTGTTGCACACGAAAACTGCTCACCATTGCT < 2:127271/149‑1 GCGACTTCAGCGCCAACAGGCGATACACCGCGTCCTCGTTCCATGGGTCGCAGCCCAGGCCCCAGACCGCTTCCGTCGGGTAGGCGATCACCGCGCCCGCCCGGATCTCACGTGCGGCTTGTTGCACACGAAAACTGCTCACCATTGCT > 2:156787/1‑149 GCGACTTCAGCGCCAACAGGCGATACACCGCGTCCTCGTTCCATGGGTCGCAGCCCAGGCCCCAGACCGCTTCCGTCGGGTAGGCGATCACCGCGCCCGCCCGGATCTCACGTGCGGCTTGTTGCACACGAAAACTGCTCACCATTGCT < 7:154227/149‑1 GACTTCAGCGCCAACAGGCGATACACCGCGTCCTCGTTCCATGGGTCGCAGCCCAGGCCCCAGACCGCTTCCGTCGGGTAGGCGATCACCGCGCCCGCCCGGATCTCACGTGCGGCTTGTTGCACACGAAAACTGCTCACCATTGCTGT < 4:316687/149‑1 GACTTCAGCGCCAACAGGCGATACACCGCGTCCTCGTTCCATGGGTCGCAGCCCAGGCCCCAGACCGCTTCCGTCGGGTAGGCGATCACCGCGCCCGCCCGGATCTCACGTGCGGCTTGTTGCACACGAAAACTGCTCACCATTGCTGT > 8:69492/1‑149 CACTGCGCACAAGCAAGGTATTCAGGCGGAGAAACAGCAATGGTGAGCAGTTTTCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACCCATGGAACGAGGACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/80347‑80502‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggacgcgACTTCAGCGCCAACAGGCGATACACCGCGTCCTCGTTCCATGGGTCGCAGCCCAGGCCCCAGACCGCTTCCGTCGGGTAGGCGATCACCGCGCCCGCCCGGATCTCACGTGCGGCTTGTTGCACACGAAAACTGCTCACCATTGCTGT < NC_002947/80527‑80380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |