New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 102940 = | 54 (1.020) | 3 (0.060) | 3/238 | NT | 5.1% | coding (1760/2052 nt) | prlC | oligopeptidase A |
? | NC_002947 | 103008 = | 61 (1.230) | coding (1828/2052 nt) | prlC | oligopeptidase A |
GGTCTCGGCGTTCAGCACGCCTTCTTCCTCGAAGCGCGAGAAGGCGTCAGCCGACAGCACTTCGGCCCACTTGTAGCTGTAGTAGCCCGCCGCGTAACCGCCCGCGAAAATGTGCGCAAAGCTGTTGGGGAAGCGGTTGTAAGCCGGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/103091‑102940 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgggcTACTACAGCTACAAGTGGGCCGAAGTGCTGTCGGCTGACGCCTTCTCGCGCTTCGAGGAAGAAGGCGTGCTGAACGCCGAGACCGGCCGCGCCTTCCGCGAGGCGATCCTGGCCCGTGGTGGTTCGCGCGAGCCGATGGAGCTGTTC > NC_002947/103008‑103154 GGTCTCGGCGTTCAGCACGCCTTCTTCCTCGAAGCGCGAGAAGGCGTCAGCCGACAGCACTTCGGCCCACTTGTAGCTGTAGTAGCCCGCCGCGTAACCGCCCGCGAAAATGTGCGCAAAGCTGTTGGGGAAGCGGTTGTAAGCCGGCG < 6:159362/149‑1 GTCTCGGCGTTCAGCACGCCTTCTTCCTCGAAGCGCGAGAAGGCGTCAGCCGACAGCACTTCGGCCCACTTGTAGCTGTAGTAGCCCGCCGCGTAACCGCCCGCGAAAATGTGCGCAAAGCTGTTGGGGAAGCGGTTGTAAGCCGGCGG > 2:71453/1‑149 TAGTAGCCCGCCGCGTAACCGCCCGCGAAAATGTGCGCAAAGCTGTTGGGGAAGCGGTTGTAAGCCGGCGGGCTACTACAGCTACAAGTGGGCCGAAGTGCTGTCGGCTGACGCCTTCTCGCGCTTCGAGGAAGAAGGCGTGCTGAACG > 3:281804/1‑149 AGTAGCCCGCCGCGTAACCGCCCGCGAAAATGTGCGCAAAGCTGTTGGGGAAGCGGTTGTAAGCCGGCGGGCTACTACAGCTACAAGTGGGCCGAAGTGCTGTCGGCTGACGCCTTCTCGCGCTTCGAGGAAGAAGGCGTGCTGAACGC > 5:213759/1‑149 TGCGCAAAGCTGTTGGGGAAGCGGTTGTAAGCCGGCGGGCTACTACAGCTACAAGTGGGCCGAAGTGCTGTCGGCTGACGCCTTCTCGCGCTTCGAGGAAGAAGGCGTGCTGAACGCCGAGACCGGCCGCGCCTTCCGCGAGGCGATC < 4:281804/148‑1 CGGCGGGATACTACAGCTACATGTGGGCAGAAGTGCTGTCGGCTGACGCCTTCTCGCGGTTCGAGGAAGAAGGCGTGCTGAACGCCGAGAGCGGCCGCGCCTTCCGCGAGGCGATCCTGGCCCGTGGTGGTTCGCGCGAGCCGATGGAG < 2:150995/149‑1 GCTACTACAGCTACAAGTGGGCCGAAGTGCTGTCGGCTGACGCCTTCTCGCGCTTCGAGGAAGAAGGCGTGCTGAACGCCGAGACCGGCCGCGCCTTCCGCGAGGCGATCCTGGCCCGTGGTGGTTCGCGCGAGCCGATGGAGCTGTTC < 3:313802/149‑1 GGTCTCGGCGTTCAGCACGCCTTCTTCCTCGAAGCGCGAGAAGGCGTCAGCCGACAGCACTTCGGCCCACTTGTAGCTGTAGTAGCCCGCCGCGTAACCGCCCGCGAAAATGTGCGCAAAGCTGTTGGGGAAGCGGTTGTAAGCCGGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/103091‑102940 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgggcTACTACAGCTACAAGTGGGCCGAAGTGCTGTCGGCTGACGCCTTCTCGCGCTTCGAGGAAGAAGGCGTGCTGAACGCCGAGACCGGCCGCGCCTTCCGCGAGGCGATCCTGGCCCGTGGTGGTTCGCGCGAGCCGATGGAGCTGTTC > NC_002947/103008‑103154 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |