New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 301396	67 (1.270)	4 (0.080)	4/242	NT	6.2%	coding (315/741 nt)	ompR	two‑component system DNA‑binding response regulator
	?	NC_002947	= 301467	58 (1.150)					coding (386/741 nt)	ompR	two‑component system DNA‑binding response regulator

TTCAACCTGGTGGTGCTCGACCTGATGCTGCCAGGCGAGGATGGCCTGTCCGCCTGCAAGCGCCTGCGCCAGCAGAACAACCAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/301244‑301396 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccTGACGACGCAGCACCGCCTTGACCCGGGCCATCAGTTCGTCCGGGTTGAACGGCTTGCCCAGGTAGTCGTCGGCGCCCAGCTCCAGGCCCTTGATGCGGCTGAGCTCGTCGCCCTTGGCGGTCAGCATGATGATCGGGATCTGGTT  <  NC_002947/301467‑301322                                                                                                                                                                                                                                                                                                             TTCAACCTGGTGGTGCTCGACCTGATGCTGCCAGGCGAGGATGGCCTGTCCGCCTGCAAGCGCCTGCGCCAGCAGAACAACCAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGG                                                                                                                                                        >  5:110048/1‑149                                                                    GCCAGCAGAACAACCAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCTGACGACGCAGCACCGCCTTGACCCGGGCCATCAGTTCGTCCGGGTTGAACGGCTTGCCCAGG                                                                                     >  6:161158/1‑149                                                                               AACCAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCTGACGACGCAGCACCGCCTTGACCCGGGCCATCAGTTCGTCCGGGTTGAACGGCTTGCCCAGGTAGTCGTCGGC                                                                          <  5:161158/149‑1                                                                                                     TGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCTGACGACGCAGCACCGCCTTGACCCGGGCCATCAGTTCGTCCGGGTTGAACGGCTTGCCCAGGTAGTCGTCGGCGCCCA                                                                     >  1:80058/1‑132                                                                                                     TGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCTGACGACGCAGCACCGCCTTGACCCGGGCCATCAGTTCGTCCGGGTTGAACGGCTTGCCCAGGTAGTCGTCGGCGCCCA                                                                     <  2:80058/132‑1                                                                                                                                                    GGCGCCTGACGACGCAGCACCGCCTTGACCCGGGCCATCAGTTCGTCCGGGTTGAACGGCTTGCCCAGGTAGTCGTCGGCGCCCAGCTCCAGGCCCTTGATGCGGCTGAGCTCGTCGCCCTTGGCGGTCAGCATGATGATCGGGATCT      <  5:83526/148‑1                                                                                                                                                     GCGCCTGACGACGCAGCACCGCCTTGACCCGGGCCATCAGTTCGTCCGGGTTGAACGGCTTGCCCAGGTAGTCGTCGGCGCCCAGCTCCAGGCCCTTGATGCGGCTGAGCTCGTCGCCCTTGGCGGTCAGCATGATGATCGGGATCTGG    <  5:95278/149‑1                                                                                                                                                     GCGCCTGACGACGCAGCACCGCCTTGACCCGGGCCATCAGTTCGTCCGGGTTGAACGGCTTGCCCAGGTAGTCGTCGGCGCCCAGCTCCAGGCCCTTGATGCGGCTGAGCTCGTCGCCCTTGGCGGTCAGCATGATGATCGGGATCTGG    <  6:150730/149‑1                                                                                                                                                       GCCTGACGACGCAGCACCGCCTTGACCCGGGCCATCAGTTCGTCCGGGTTGAACGGCTTGCCCAGGTAGTCGTCGGCGCCCAGCTCCAGGCCCTTGATGCGGCTGAGCTCGTCGCCCTTGGCGGTCAGCATGATGATCGGGATCTGGTT  <  2:96885/149‑1                                                                                                                                                                                                                                                                                                             TTCAACCTGGTGGTGCTCGACCTGATGCTGCCAGGCGAGGATGGCCTGTCCGCCTGCAAGCGCCTGCGCCAGCAGAACAACCAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/301244‑301396 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccTGACGACGCAGCACCGCCTTGACCCGGGCCATCAGTTCGTCCGGGTTGAACGGCTTGCCCAGGTAGTCGTCGGCGCCCAGCTCCAGGCCCTTGATGCGGCTGAGCTCGTCGCCCTTGGCGGTCAGCATGATGATCGGGATCTGGTT  <  NC_002947/301467‑301322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.