New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 301396	67 (1.270)	4 (0.080)	4/242	NT	6.2%	coding (315/741 nt)	ompR	two‑component system DNA‑binding response regulator
	?	NC_002947	= 301467	58 (1.150)					coding (386/741 nt)	ompR	two‑component system DNA‑binding response regulator

AACAACCAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGG  >  NC_002947/301319‑301610                                                                                                                                                       |                                                                                                                                                aacaacCAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCa                                                                                                                                                 <  2:88554/149‑1 (MQ=255) aacaacCAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCa                                                                                                                                                 <  7:202999/149‑1 (MQ=255)  acaacCAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCa                                                                                                                                                 <  3:73075/148‑1 (MQ=255)    aacCAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAggc                                                                                                                                              <  2:96885‑M2/149‑4 (MQ=255)      ccAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAggcgc                                                                                                                                            <  6:150730‑M2/149‑6 (MQ=255)      ccAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAggcgc                                                                                                                                            <  5:95278‑M2/149‑6 (MQ=255)      ccAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGACatcgg                                                                                                                                             >  3:201716/1‑144 (MQ=255)        aGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAggcgcc                                                                                                                                           <  5:83526‑M2/148‑7 (MQ=255)         gATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGa                                                                                                                                         <  6:245612/149‑1 (MQ=255)           tCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGc                                                                                                                                       <  5:326458/149‑1 (MQ=255)                   atcatGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCgg                                                                                                                                <  5:150730/148‑1 (MQ=255)                          tGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCg                                                                                                                        >  2:328847/1‑149 (MQ=255)                            aCCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCg                                                                                                                        <  6:228359/147‑1 (MQ=255)                             ccGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGc                                                                                                                     <  6:95278/149‑1 (MQ=255)                                   aGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAg                                                                                                               <  6:83526/149‑1 (MQ=255)                                    gggCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGCTCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAg                                                                                                               <  1:96885/149‑1 (MQ=255)                                        gacgaGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGCCTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGAc                                                                                                            >  5:273076/1‑147 (MQ=255)                                        gacgaGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGa                                                                                                          <  6:98501/149‑1 (MQ=255)                                              cTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCg                                                                                                                 >  3:15326/1‑136 (MQ=255)                                              cTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCg                                                                                                                 <  4:15326/136‑1 (MQ=255)                                                cAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCa                                                                                                  >  2:328765/1‑149 (MQ=255)                                                 aGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGc                                                                                                                                   >  6:114861/1‑115 (MQ=255)                                                 aGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGc                                                                                                                                   <  5:114861/115‑1 (MQ=255)                                                 aGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTc                                                                                                   >  6:62122/1‑147 (MQ=255)                                                 aGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTc                                                                                                   <  5:62122/147‑1 (MQ=255)                                                       aTCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCgg                                                                                           >  6:261382/1‑149 (MQ=255)                                                        tCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGc                                                                                          <  1:328847/149‑1 (MQ=255)                                                           aGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGAc                                                                                       >  6:24580/1‑149 (MQ=255)                                                              gCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTAt                                                                                    <  5:261382/149‑1 (MQ=255)                                                                   gAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAg                                                                                 <  1:328765/147‑1 (MQ=255)                                                                   gAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGc                                                                                <  5:24580/148‑1 (MQ=255)                                                                     gCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGt                                                                             <  1:79075/149‑1 (MQ=255)                                                                       tGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAggcgcccagctccaggcccttgatgcggctgagctcgtcgcccttggcggtca                                                                                            >  1:80058‑M2/1‑79 (MQ=255)                                                                       tGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAggcgcccagctccaggcccttgatgcggctgagctcgtcgcccttggcggtca                                                                                            <  2:80058‑M2/132‑54 (MQ=255)                                                                        gggCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGcc                                                                                                                         <  6:173308/102‑1 (MQ=255)                                                                        gggCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGcc                                                                                                                         >  5:173308/1‑102 (MQ=255)                                                                         ggCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCt                                                                         >  4:256068/1‑149 (MQ=255)                                                                            gcCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAggcgcccagctccaggcccttgatgcggctgagctcgtcgcccttggcggtcagcatgatgatcgggatctggtt                                                                      <  5:161158‑M2/149‑76 (MQ=255)                                                                                  gacTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGTCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCcg                                                                >  3:213046/1‑149 (MQ=255)                                                                                   acTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCcgc                                                               <  5:181649/149‑1 (MQ=255)                                                                                     tACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCcgc                                                               >  6:71765/1‑147 (MQ=255)                                                                                       ccTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAggcgcccagctccaggcccttgatgcggctgagctcgtcgcccttggcggtcagcatgatgatcgggatctggttgttctgctggc                                                           >  6:161158‑M2/1‑63 (MQ=255)                                                                                       ccTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGa                                                             <  3:256068/147‑1 (MQ=255)                                                                                          gggCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGAc                                                                                                            >  5:219371/1‑97 (MQ=255)                                                                                          gggCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGAc                                                                                                            <  6:219371/97‑1 (MQ=255)                                                                                           ggCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCaa                                                       <  5:117251/149‑1 (MQ=255)                                                                                              aaGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGa                                                                                  <  8:95567/119‑1 (MQ=255)                                                                                              aaGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGa                                                                                  >  7:95567/1‑119 (MQ=255)                                                                                               aGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAg                                                            >  8:299035/1‑140 (MQ=255)                                                                                               aGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAg                                                            <  7:299035/140‑1 (MQ=255)                                                                                                gCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTg                                                                        <  3:130261/127‑1 (MQ=255)                                                                                                gCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTg                                                                        >  4:130261/1‑127 (MQ=255)                                                                                                gCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTg                                                  >  3:270230/1‑149 (MQ=255)                                                                                                 ccGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTgg                                                 <  6:273076/149‑1 (MQ=255)                                                                                                             gACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGca                                     <  5:71765/149‑1 (MQ=255)                                                                                                               cGAACTGATGGCCCGGG‑TCAAGGCGGTGGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGca                                     >  1:197931/1‑148 (MQ=255)                                                                                                               cGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAg                                                                                 >  6:79862/1‑103 (MQ=255)                                                                                                               cGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGcac                                    <  2:197931/148‑1 (MQ=255)                                                                                                                    tGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCt                               >  2:4770/1‑148 (MQ=255)                                                                                                                    tGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCt                               >  5:129203/1‑148 (MQ=255)                                                                                                                                   aaGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGAc                                                                                                            <  7:229413/57‑1 (MQ=255)                                                                                                                                   aaGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGAc                                                                                                            >  8:229413/1‑57 (MQ=255)                                                                                                                                   aaGGCGGT‑GCTGCGTCGTCAGGCGACGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGt                 >  6:47760/1‑148 (MQ=255)                                                                                                                                     ggCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCg              >  6:4212/1‑149 (MQ=255)                                                                                                                                          t‑gctgcGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGc                     <  3:62823/137‑1 (MQ=255)                                                                                                                                          t‑gctgcGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGc                     >  4:62823/1‑137 (MQ=255)                                                                                                                                             ctgcGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGc        <  4:270230/148‑1 (MQ=255)                                                                                                                                             ctgcGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCt       >  7:297858/1‑149 (MQ=255)                                                                                                                                              tgcGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTcacca                          <  5:102422/129‑1 (MQ=255)                                                                                                                                              tgcGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTcacca                          >  6:102422/1‑129 (MQ=255)                                                                                                                                               gcGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCa     <  4:213046/149‑1 (MQ=255)                                                                                                                                                  tcgtcAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATAAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAgg  >  1:313166/1‑149 (MQ=255)                                                                                                                                                       |                                                                                                                                                AACAACCAGATCCCGATCATCATGCTGACCGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGG‑TCAAGGCGGT‑GCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGG  >  NC_002947/301319‑301610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.