| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 319049 = | 56 (1.060) | 3 (0.060) | 3/238 | NT | 5.4% | coding (693/1815 nt) | PP_0264 | sensor histidine kinase |
| ? | NC_002947 | 319095 = | 53 (1.070) | coding (647/1815 nt) | PP_0264 | sensor histidine kinase | |||||
GGTCAAAGTCGATCTCGACCACACCGAAACCCTGTGGGGCCGTACGCCCGAGCAGCTGTTGCTGACCGATCACAATGGCGTGGTCATCCTGACTTCGCGGCCCGACTGGCGCTTCCGTGCTACCCGCACGCTGACCGACGCCGAGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/319199‑319049‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgccagTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGC > NC_002947/319095‑319240 GGTCAAAGTCGATCTCGACCACACCGAAACCCTGTGGGGCCGTACGCCCGAGCAGCTGTTGCTGACCGATCACAATGGCGTGGTCATCCTGACTTCGCGGCCCGACTGGCGCTTCCGTGCTACCCGCACGCTGACCGACGCCGAGCG > 1:255552/1‑147GGTCAAAGTCGATCTCGACCACACCGAAACCCTGTGGGGCCGTACGCCCGAGCAGCTGTTGCTGACCGATCACAATGGCGTGGTCATCCTGACTTCGCGGCCCGACTGGCGCTTCCGTGCTACCCGCACGCTGACCGACGCCGAGCG < 2:255552/147‑1 CCTGTGGGGCCGTACGCCCGAGCAGCTGTTGCTGACCGATCACAATGGCGTGGTCATCCTGACTTCGCGGCCCGACTGGCGCTTCCGTGCTACCCGCACGCTGACCGACGCCGAGCGC < 7:224784/118‑1 CCTGTGGGGCCGTACGCCCGAGCAGCTGTTGCTGACCGATCACAATGGCGTGGTCATCCTGACTTCGCGGCCCGACTGGCGCTTCCGTGCTACCCGCACGCTGACCGACGCCGAGCGC > 8:224784/1‑118 GGCCGTACGCCCGAGCAGCTGTTGCTGACCGATCACAATGGCGTGGTCATCCTGACTTCGCGGCCCGACTGGCGCTTCCGTGCTACCCGCACGCTGACCGACGCCGAGC < 1:20405/109‑1 GGCCGTACGCCCGAGCAGCTGTTGCTGACCGATCACAATGGCGTGGTCATCCTGACTTCGCGGCCCGACTGGCGCTTCCGTGCTACCCGCACGCTGACCGACGCCGAGC > 2:20405/1‑109 CTGGCGCTTCCGTGCTACCCGCACGCTGACCGACGCCGAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTG < 7:117036/148‑1 CTGGCGCTTCCGTGCTACCCGCACGCTGACCGACGCCGAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTG > 8:117036/1‑148 TGGCGCTTCCGTGCTACCCGCACGCTGACCGACGCCGAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTATGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGAC > 4:64906/1‑149 GCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCG < 1:266315/130‑1 GCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCG > 2:266315/1‑130 CCAGTCGGGCCGCGAAGTCAGGATGACCACGTCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGT > 1:42870/1‑87 CCAGTCGGGCCGCGAAGTCAGGATGACCACGTCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGT < 2:42870/87‑1 CAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGC > 5:112255/1‑149 GGTCAAAGTCGATCTCGACCACACCGAAACCCTGTGGGGCCGTACGCCCGAGCAGCTGTTGCTGACCGATCACAATGGCGTGGTCATCCTGACTTCGCGGCCCGACTGGCGCTTCCGTGCTACCCGCACGCTGACCGACGCCGAGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/319199‑319049‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgccagTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGC > NC_002947/319095‑319240 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |