New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	320890 =	53 (1.000)	3 (0.060)	3/242	NT	5.8%	coding (284/1107 nt)	aguA	agmatine deiminase
	?	NC_002947	320939 =	47 (0.930)					coding (333/1107 nt)	aguA	agmatine deiminase

CAGCGCTCCATTTCCAGCACCTTGGCGGCCAGTTCCTCGTCGCGGTTCCAGGGTGCGTACAGGCCGCCATCGAAGCCGCCCCAGGCGTTGAAGCCCCAATCTACACCGCGCACTTCGCCATGGTCGTTGATGACGAAGGTAGGGCCGGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/321040‑320890 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgtAGATTGGGGCTTCAACGCCTGGGGCGGCTTCGATGGCGGCCTGTACGCACCCTGGAACCGCGACGAGGAACTGGCCGCCAAGGTGCTGGAAATGGAGCGCTGCCAGCGCTACCAGACCGAAGGCTTTGTGCTGGAAGGTGGTTCGAT  >  NC_002947/320939‑321085                                                                                                                                                                                                                                                                                                            CAGCGCTCCATTTCCAGCACCTTGGCGGCCAGTTCCTCGTCGCGGTTCCAGGGTGCGTACAGGCCGCCATCGAAGCCGCCCCAGGCGTTGAAGCCCCAATCTACACCGCGCACTTCGCCATGGTCGTTGATGACGAAGGTAGGGCCGGT                                                                                                                                                       <  3:307791/149‑1  AGCGCTCCATTTCCAGCACCTTGGCGGCCAGTTCCTCGTCGCGGTTCCAGGGTGCGTACAGGCCGCCATCGAAGCCGCCCCAGGCGTTGAAGCCCCAATCTACACCGCGCACTTCGCCATGGTCGTTGATGACGAAGGTAGGGCCGGTG                                                                                                                                                      >  5:150151/1‑149               CAGCACCTTGGCGGCCAGTTCCTCGTCGCGGTTCCAGGGTGCGTACAGGCCGCCATCGAAGCCGCCCCAGGCGTTGAAGCCCCAATCTACACCGCGCACTTCGCCATGGTCGTTGATGACGAAGGTAGGGCCG                                                                                                                                                         >  7:249111/1‑133               CAGCACCTTGGCGGCCAGTTCCTCGTCGCGGTTCCAGGGTGCGTACAGGCCGCCATCGAAGCCGCCCCAGGCGTTGAAGCCCCAATCTACACCGCGCACTTCGCCATGGTCGTTGATGACGAAGGTAGGGCCG                                                                                                                                                         <  8:249111/133‑1                                                                                                CCAATCTACACCGCGCACTTCGCCATGGTCGTTGATGACGAAGGTAGGGCCGGTGTAGATTGGGGCTTCAACGCCTGGGGCGGCTTCGATGGCGGCCTGTACGCACCCTGGAACCGCGACGAGGAACTGGCCGCCAAGGTGCTGGAAAT                                                        >  6:140129/1‑149                                                                                                       ACACCGCGCACTTCGCCATGGTCGTTGATGACGAAGGTAGGGCCGGTGTAGATTGGGGCTTCAACGCCTGGGGCGGCTTCGATGGCGGCCTGTACGCACCCTGGAACCGCGACGAGGAACTGGC                                                                          >  7:162489/1‑124                                                                                                       ACACCGCGCACTTCGCCATGGTCGTTGATGACGAAGGTAGGGCCGGTGTAGATTGGGGCTTCAACGCCTGGGGCGGCTTCGATGGCGGCCTGTACGCACCCTGGAACCGCGACGAGGAACTGGC                                                                          <  8:162489/124‑1                                                                                                                                                  CGGTGTAGATTGGGGCTTCAACGCCTGGGGCGGCTTCGATGGCGGCCTGTACGCACCCTGGAACCGCGACGAGGAACTGGCCGCCAAGGTGCTGGAAATGGAGCGCTGCCAGCGCTACCAGACCGAAGGCTTTGTGCTGGAAGGTGGgt      <  6:268549/149‑3                                                                                                                                                   GGTGTAGATTGGGGCTTCAACGCCTGGGGCGTCTTCGATGGCGGCCTGTACGCACCCTGGAACCGCGACGAGGAACTGGCCGCCAAGGTGCTGGAAATGGAGCGCTGCCAGCGCTACCAGACCGAAGGCTTTGTGCTGGAAGGTGGTTC     <  4:307791/149‑1                                                                                                                                                    GTGTAGATTGGGGCTTCAACGCCTGGGGCGGCTTCGATGGCGGCCTGTACGCACCCTGGAACCGCGACGAGGAACTGGCCGCCAAGGTGCTGGAAATGGAGCGCTGCCAGCGCTACCAGACCGAA                            <  5:244301/125‑1                                                                                                                                                    GTGTAGATTGGGGCTTCAACGCCTGGGGCGGCTTCGATGGCGGCCTGTACGCACCCTGGAACCGCGACGAGGAACTGGCCGCCAAGGTGCTGGAAATGGAGCGCTGCCAGCGCTACCAGACCGAA                            >  6:244301/1‑125                                                                                                                                                     TGTAGATTGGGGCTTCAACTCCTGGGGCGGCTTCGATGGCGGCCTGTACGCACCCTGGAACCGCGACGAGGAACTGGCCGCCAAGGTGCTGGAAATGGAGCGCTGCCAGCGCTACCAGACCGAAGGCTTTGTGCTGGAAGGTGGTTCGA   <  2:194362/149‑1                                                                                                                                                       TAGATTGGGGCTTCAACGCCTGGGGCGGCTTCGATGGCGGCCTGTACGCACCCTGGAACCGCGACGAGGAACTGGCCGCCAAGGTGCTGGAAATGGAGCGCTACCAGCGCTACCAGACCGAAGGCTTTGTGCTGGAAGGTGGTTCGAT  <  5:140129/148‑1                                                                                                                                                                                                                                                                                                            CAGCGCTCCATTTCCAGCACCTTGGCGGCCAGTTCCTCGTCGCGGTTCCAGGGTGCGTACAGGCCGCCATCGAAGCCGCCCCAGGCGTTGAAGCCCCAATCTACACCGCGCACTTCGCCATGGTCGTTGATGACGAAGGTAGGGCCGGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/321040‑320890 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgtAGATTGGGGCTTCAACGCCTGGGGCGGCTTCGATGGCGGCCTGTACGCACCCTGGAACCGCGACGAGGAACTGGCCGCCAAGGTGCTGGAAATGGAGCGCTGCCAGCGCTACCAGACCGAAGGCTTTGTGCTGGAAGGTGGTTCGAT  >  NC_002947/320939‑321085

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.