New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 653135	50 (0.950)	3 (0.060)	3/242	NT	5.9%	coding (1608/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	= 653175	48 (0.950)					coding (1568/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL

GTGCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/652983‑653135 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccgATGAGGTGCGCTCACTGGCTCAGCGCACCACGGGGGCTACCGGCGAGATCCAGGCGTTGATCGACCGCCTGCAGCAGGCCGCCAGAAGTTCGGTGGCGGGGATGCGCGCGCAACTGGAACATGCCGAGGCCACGGCCAACCAGGCCCA  <  NC_002947/653175‑653028                                                                                                                                                                                                                                                                                                               GTGCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTC                                                                                                                                                          >  8:325469/1‑149  TGCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCG                                                                                                                                                         <  7:99523/149‑1   GCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGC                                                                                                                                                        >  8:140470/1‑149    CGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCC                                                                                                                                                       <  7:325469/149‑1    CGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGC                                                                                                                                                        <  6:92040/148‑1     GAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCG                                                                                                                                                      <  1:76989/149‑1     GAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCG                                                                                                                                                      <  2:61901/149‑1     GAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCG                                                                                                                                                      >  5:53667/1‑149                                                      GTTGGCCGGGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGATGAGGTGCGCTCACTGGCTCAGCGCACCACGGGGGCTACCGGCGAGA                                                                                                      <  2:308114/148‑1                                                       TTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGATGAGGTGCGCTCACTGGCTCAGCGCACCACGGGGGCTACCGGCGAG                                                                                                       <  1:295977/146‑1                                                       TTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGATGAGGTGCGCTCACTGGCTCAGCGCACCACGGGGGCTACCGGCGAG                                                                                                       >  2:295977/1‑146                                                                                                                                                    TCGCCGATGAGGTGCGCTCACTGGCTCAGCGCACCACGGGGGCTACCGGCGAGATCCAGGCGTTGATCGACCGCCTGCAGCAGGCCGCCAGAAGTTCGGTGGCGGGGATGCGCGCGCAACTGGAACATGCCGAGGCCACGGCCAACCAG       <  8:254904/149‑1                                                                                                                                                        CGATGAGGTGCGCTCACTGGCTCAGCGCACCACGGGGGCTACCGGCGAGATCCAGGCGTTGATCGACCGCCTGCAGCAGGCCGCCAGAAGTTCGGTGGCGGGGATGCGCGCGCAACTGGAACATGCCGAGGCCACGGCCAACCAGGCCC   <  2:33351/149‑1                                                                                                                                                         GATGAGGTGCGCTCACTGGCTCAGCGCACCACGGGGGCTACCGGCGAGATCCAGGCGTTGATCGACCGCCTGCAGCAGGCCGCCAGAAGTTCGGTGGCGGGGATGCGCGCGCAACTGGAACATGCCGAGGCCACGGCCAACCAGGCCCA  <  2:113324/149‑1                                                                                                                                                                                                                                                                                                               GTGCGAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/652983‑653135 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccgATGAGGTGCGCTCACTGGCTCAGCGCACCACGGGGGCTACCGGCGAGATCCAGGCGTTGATCGACCGCCTGCAGCAGGCCGCCAGAAGTTCGGTGGCGGGGATGCGCGCGCAACTGGAACATGCCGAGGCCACGGCCAACCAGGCCCA  <  NC_002947/653175‑653028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.