New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 653135	50 (0.950)	3 (0.060)	3/242	NT	5.9%	coding (1608/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	= 653175	48 (0.950)					coding (1568/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL

GAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCA  >  NC_002947/652987‑653283                                                                                                                                                     |                                                                                                                                                     gAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCG                                                                                                                                                      <  2:61901‑M1/149‑1 (MQ=255) gAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCG                                                                                                                                                      >  5:53667‑M1/1‑149 (MQ=255) gAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCG                                                                                                                                                      <  1:76989‑M1/149‑1 (MQ=255)   aTGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCgg                                                                                                                                                     >  8:47945/1‑148 (MQ=255)      gCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGc                                                                                                                                                 <  7:140470/149‑1 (MQ=255)              aaTCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCgtgg                                                                                                                                         >  2:199800/1‑149 (MQ=255)              aaTCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCgtgg                                                                                                                                         <  8:186346/149‑1 (MQ=255)              aaTCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCgtgg                                                                                                                                         >  7:81634/1‑149 (MQ=255)               aTCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCgtggt                                                                                                                                        <  7:5070/149‑1 (MQ=255)                    aTCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCt                                                                                                                                   <  8:81634/149‑1 (MQ=255)                     tCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCt                                                                                                                                   >  5:338960/1‑148 (MQ=255)                       cAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGa                                                                                                                                 <  6:338960/148‑1 (MQ=255)                       cAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGa                                                                                                                                 <  2:145038/148‑1 (MQ=255)                            ccccATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGt                                                                                                                           <  8:326266/149‑1 (MQ=255)                            ccccATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGt                                                                                                                           <  5:361845/149‑1 (MQ=255)                             cccATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTa                                                                                                                                                   >  1:204886/1‑124 (MQ=255)                             cccATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTa                                                                                                                                                   <  2:204886/124‑1 (MQ=255)                                aTCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAgc                                                                                                                       >  1:141836/1‑149 (MQ=255)                                   cgccgcCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCa                                                                                                                    >  4:191078/1‑149 (MQ=255)                                          tGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATc                                                                                                             <  2:113324‑M2/149‑2 (MQ=255)                                           gggCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATcg                                                                                                            <  2:33351‑M2/149‑3 (MQ=255)                                              cctggTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAg                                                                                                                        >  7:142083/1‑134 (MQ=255)                                              cctggTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAg                                                                                                                        <  8:142083/134‑1 (MQ=255)                                               ctggTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCt                                                                                                                                   <  2:188888/122‑1 (MQ=255)                                               cTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATcggcga                                                                                                        <  8:254904‑M2/149‑7 (MQ=255)                                                  gTTGGCCGGGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGatgaggtgcgctcactggctcagcgcaccacgggggctaccggcgaga                                                                                                      <  2:308114‑M1/148‑49 (MQ=255)                                                   ttGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGatgaggtgcgctcactggctcagcgcaccacgggggctaccggcgag                                                                                                       >  2:295977‑M1/1‑99 (MQ=255)                                                   ttGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGatgaggtgcgctcactggctcagcgcaccacgggggctaccggcgag                                                                                                       <  1:295977‑M1/146‑48 (MQ=255)                                                      gCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACgg                                                                                                  <  7:47945/148‑1 (MQ=255)                                                         gTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCaaa                                                                                              <  1:199800/149‑1 (MQ=255)                                                         gTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCaaa                                                                                              <  7:254904/149‑1 (MQ=255)                                                             ccTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGa                                                                                                                                 >  7:100952/1‑110 (MQ=255)                                                             ccTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGa                                                                                                                                 <  8:100952/110‑1 (MQ=255)                                                                cGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACgg                                                                                       <  3:191078/149‑1 (MQ=255)                                                                     tGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCAt                                                                                  <  6:53667/149‑1 (MQ=255)                                                                          cAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGc                                                                             <  2:141836/149‑1 (MQ=255)                                                                                 gcgcgcATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACg                                                                      >  6:275964/1‑149 (MQ=255)                                                                                       aTCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGc                                                                             >  6:247426/1‑136 (MQ=255)                                                                                       aTCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGc                                                                             <  5:247426/136‑1 (MQ=255)                                                                                       aTCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGc                                                                             <  1:82004/136‑1 (MQ=255)                                                                                       aTCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGc                                                                             >  2:82004/1‑136 (MQ=255)                                                                                            cGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCg                                                            >  3:331378/1‑148 (MQ=255)                                                                                            cGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGa                                                           >  3:326258/1‑149 (MQ=255)                                                                                                aCCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATcgc                                                       >  2:345255/1‑149 (MQ=255)                                                                                                 ccGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATcgcg                                                      <  1:113324/149‑1 (MQ=255)                                                                                                   gAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGc                                                    <  1:33351/149‑1 (MQ=255)                                                                                                    aaCTTCTGGCGGCCAGCAGCAGGCGGTCGAACAACGCCAGCATCTCGCCGGTAGCCCACGTGCTGAGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGCCAAAGCCACCGCCCATCTCGCCGGCACGGTCCGCTAAGATCCCGGc                                                    >  5:359199/1‑148 (MQ=255)                                                                                                              ggcCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCGGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAATCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCca                                         <  6:359199/149‑1 (MQ=255)                                                                                                                     tgcAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCAc                                                                                         <  3:195057/94‑1 (MQ=255)                                                                                                                     tgcAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCAc                                                                                         >  4:195057/1‑94 (MQ=255)                                                                                                                      gcAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTg                                 >  4:211647/1‑149 (MQ=255)                                                                                                                        aGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGt                               <  4:331378/149‑1 (MQ=255)                                                                                                                        aGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGt                               <  1:345255/149‑1 (MQ=255)                                                                                                                        aGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGt                               <  4:326258/149‑1 (MQ=255)                                                                                                                               cGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATcgc                                                       >  8:263208/1‑118 (MQ=255)                                                                                                                               cGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATcgc                                                       <  7:263208/118‑1 (MQ=255)                                                                                                                                 aTCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCgg                       >  4:251788/1‑148 (MQ=255)                                                                                                                                  tCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCgg                       <  2:258310/147‑1 (MQ=255)                                                                                                                                  tCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCgg                       >  1:258310/1‑147 (MQ=255)                                                                                                                                  tCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGc                      >  3:257984/1‑148 (MQ=255)                                                                                                                                       gCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATcgc                >  1:304741/1‑149 (MQ=255)                                                                                                                                            gATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATcgcgcg             <  5:245756/147‑1 (MQ=255)                                                                                                                                            gATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATcgcgcg             >  6:245756/1‑147 (MQ=255)                                                                                                                                              tctcGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATcggcgagatccaggcgttgatcgaccgcctgcagcaggccgccagaagttcggtggcggggatgcgcgcgcaactggaacatgccgaggccccggccaac          <  2:308114‑M2/148‑101 (MQ=255)                                                                                                                                               ctcGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATcggcgagatccaggcgttgatcgaccgcctgcagcaggccgccagaagttcggtggcggggatgcgcgcgcaactggaacatgccgaggccacggccaa           <  1:295977‑M2/146‑100 (MQ=255)                                                                                                                                               ctcGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATcggcgagatccaggcgttgatcgaccgcctgcagcaggccgccagaagttcggtggcggggatgcgcgcgcaactggaacatgccgaggccacggccaa           >  2:295977‑M2/1‑47 (MQ=255)                                                                                                                                                tcGCCGatgaggtgcgctcactggctcagcgcaccacgggggctaccggcgagatccaggcgttgatcgaccgcctgcagcaggccgccagaagttcggtggcggggatgcgcgcgcaactggaacatgccgaggccacggccaaccag       <  8:254904‑M1/149‑144 (MQ=255)                                                                                                                                                  gCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCcagcag                                     >  4:273572/1‑117 (MQ=255)                                                                                                                                                  gCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCcagcag                                     <  3:273572/117‑1 (MQ=255)                                                                                                                                                  gCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCg     >  6:96090/1‑149 (MQ=255)                                                                                                                                                    cGatgaggtgcgctcactggctcagcgcaccacgggggctaccggcgagatccaggcgttgatcgaccgcctgcagcaggccgccagaagttcggtggcggggatgcgcgcgcaactggaacatgccgaggccacggccaaccaggccc   <  2:33351‑M1/149‑148 (MQ=255)                                                                                                                                                     gatgaggtgcgctcactggctcagcgcaccacgggggctaccggcgagatccaggcgttgatcgaccgcctgcagcaggccgccagaagttcggtggcggggatgcgcgcgcaactggaacatgccgaggccacggccaaccaggccca  <  2:113324‑M1/149‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GAATGGCACAGACAATCTCATCCAGTGCCCCATCCGCCGCCTGGGCCTGGTTGGCCGTGGCCTCGGCATGTTCCAGTTGCGCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCA  >  NC_002947/652987‑653283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.