| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 678537 = | 54 (1.020) | 3 (0.060) | 3/240 | NT | 6.2% | coding (481/1374 nt) | PP_0581 | 3‑oxoacyl‑ACP reductase |
| ? | NC_002947 | 678588 = | 39 (0.780) | coding (430/1374 nt) | PP_0581 | 3‑oxoacyl‑ACP reductase | |||||
CTGAAGCAGTTGCGTGAATTTTTCCAGCCGCTGTTACGCAGCCTGGCCCCATGCGCCCATGTACTGGTGC‑‑TGGGCCGTGCACCGGAAGGCCTCGACGACCCACTGGCCAGCGTTGCACAGCGTGCCCTTGAGGGCTTCAGCCGCTCACTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/678690‑678537‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccaGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCAGCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCGAATACCACGGCCTT > NC_002947/678588‑678735 CTGAAGCAGTTGCGTGAATTTTTCCAGCCGCTGTTACGCAGCCTGGCCCCATGCGCCCATGTACTGGTGC‑‑TGGGCCGTGCACCGGAAGGCCTCGACGACCCACTGGCCAGCGTTGCACAGCGTGCCCTTGAGGGCTTCAGCCGCTCACT < 8:197987/149‑1 AGTTGCGTGAATTTTTCCAGCCGCTGTTACGCAGCCTGGCCCCATGCGCCCATGTACTGGTGCAGGGGGCCGTGCACCGGAAGGCCTCGACGACCCACTGGCCAGCGTTGCACAGCGTGCCCTTGAGGGCTTCAGCCGCTCACTGGCC > 1:104562/1‑148 CTGGCCAGCGTTGCACAGCGTGCCCTTGAGGGCTTCAGCCGCTCACTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCAGCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTG > 8:200049/1‑149 GGCCAGCGTTGCACAGCGTGCCCTTGAGGGCTTCAGCCGCTCACTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCAGCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCCCGCAACTGCT > 3:187450/1‑149 CAGCGTTGCACAGCGTGCCCTTGAGGGCTTCAGCCGCTCACTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCAGCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCA < 7:200049/149‑1 AGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCAGCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCGAATACCACGGCCTT < 3:152964/149‑1 AGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCAGCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCGAATACCACGGCCTT < 3:158177/149‑1 AGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCAGCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCGAATACCACGGCCTT > 8:3796/1‑149 CTGAAGCAGTTGCGTGAATTTTTCCAGCCGCTGTTACGCAGCCTGGCCCCATGCGCCCATGTACTGGTGC‑‑TGGGCCGTGCACCGGAAGGCCTCGACGACCCACTGGCCAGCGTTGCACAGCGTGCCCTTGAGGGCTTCAGCCGCTCACTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/678690‑678537‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccaGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCAGCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCGAATACCACGGCCTT > NC_002947/678588‑678735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |