New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	678537 =	54 (1.020)	3 (0.060)	3/240	NT	6.2%	coding (481/1374 nt)	PP_0581	3‑oxoacyl‑ACP reductase
	?	NC_002947	678588 =	39 (0.780)					coding (430/1374 nt)	PP_0581	3‑oxoacyl‑ACP reductase

TTGGCGAGAGGAAGAAGCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCGAATACCACGGCCTT  >  NC_002947/678441‑678735                                                                                                                                                     |                                                                                                                                                      cagttgcgtgaatttttccagccgctgttacgcagcctggccccatgcgcccatgtactggtgctgggccgtgcaccggaaggcctcgacgacccacTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAg                                                                                                                                                       >  8:200049‑M1/98‑149 (MQ=255)           gaagaaGCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGgtcgtc                                                                                                                                              >  6:333394/1‑147 (MQ=255)            aagaagCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGTGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAg                                                                                                                                           >  7:255503/1‑149 (MQ=255)             agaagCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAgg                                                                                                                                          >  7:24954/1‑149 (MQ=255)              gaagCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGc                                                                                                                                         >  1:12206/1‑149 (MQ=255)                    cAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCg                                                                                                                                   <  5:220235/149‑1 (MQ=255)                     aGGGCGCCTTCCAGCTGATCTTCGGCACC‑GGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGt                                                                                                                                 >  6:288292/1‑149 (MQ=255)                       ggCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTg                                                                                                                                <  5:333394/149‑1 (MQ=255)                               ccAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGcc                                                                                                                         >  7:32654/1‑148 (MQ=255)                                cAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCa                                                                                                                       <  8:32654/149‑1 (MQ=255)                                             gCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATg                                                                                                        <  2:12206/149‑1 (MQ=255)                                              cACCGGTGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATgg                                                                                                       <  8:255503/149‑1 (MQ=255)                                              cACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATgg                                                                                                       <  3:149108/149‑1 (MQ=255)                                                ccGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGgc                                                                                                     <  4:188569/149‑1 (MQ=255)                                                  gggggCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGgcgc                                                                                                   <  4:266619/149‑1 (MQ=255)                                                  gggggCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGgcg                                                                                                    >  3:266619/1‑148 (MQ=255)                                                    gggCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCAt                                                                                                 <  3:79242/149‑1 (MQ=255)                                                         aCATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATgggg                                                                                             >  1:232563/1‑149 (MQ=255)                                                              cagcagCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGc                                                                                       >  5:72029/1‑149 (MQ=255)                                                                 cagcTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGc                                                                                    <  4:124638/149‑1 (MQ=255)                                                                  agcTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGc                                                                                    <  2:187787/148‑1 (MQ=255)                                                                  agcTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCg                                                                                   <  6:330490/149‑1 (MQ=255)                                                                                gcCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTgg                                                                      >  4:295977/1‑148 (MQ=255)                                                                                   aTTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTa                                                                                                            <  3:304075/107‑1 (MQ=255)                                                                                   aTTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTa                                                                                                            >  4:304075/1‑107 (MQ=255)                                                                                   aTTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGaaaa                                                                  <  3:295977/149‑1 (MQ=255)                                                                                       cgcAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGTCAGGCTGCGTAACAGCGGCTGGAAAAATTc                                                              <  2:232563/149‑1 (MQ=255)                                                                                          aG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACg                                                           >  8:333444/1‑149 (MQ=255)                                                                                                 ctggccagcgttgcacagcgtgcccttgagggcttcagccgctcactggccaGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTg                                                     >  8:200049‑M2/53‑149 (MQ=255)                                                                                                   ggccagcgttgcacagcgtgcccttgagggcttcagccgctcactggccaGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCCCGCAACTGCt                                                   >  3:187450‑M2/51‑149 (MQ=255)                                                                                                   GGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCCCTGCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACt                                                      >  1:104562‑M1/1‑148 (MQ=255)                                                                                                      cagcgttgcacagcgtgcccttgagggcttcagccgctcactggccaGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCa                                                <  7:200049‑M2/102‑1 (MQ=255)                                                                                                       AGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAg                                               <  8:197987‑M1/149‑1 (MQ=255)                                                                                                                   aaGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTc                                   >  7:43286/1‑149 (MQ=255)                                                                                                                        cTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGt                                              >  2:167312/1‑133 (MQ=255)                                                                                                                        cTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGt                                              <  1:167312/133‑1 (MQ=255)                                                                                                                        cTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTTCATCGCGGTCGTAc                               >  8:146671/1‑148 (MQ=255)                                                                                                                        cTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACa                              <  7:197987/149‑1 (MQ=255)                                                                                                                                cACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTg                      <  6:72029/149‑1 (MQ=255)                                                                                                                                cACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTg                      <  7:333444/149‑1 (MQ=255)                                                                                                                                    cTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCAt                  <  8:43286/149‑1 (MQ=255)                                                                                                                                     tgtgCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATc                 >  8:46398/1‑149 (MQ=255)                                                                                                                                       tgCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATc                 <  7:146671/147‑1 (MQ=255)                                                                                                                                       tgCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCg                >  4:158177/1‑148 (MQ=255)                                                                                                                                       tgCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCg                >  4:152964/1‑148 (MQ=255)                                                                                                                                             gCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCAc                                                            <  4:147500/98‑1 (MQ=255)                                                                                                                                             gCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCAc                                                            >  3:147500/1‑98 (MQ=255)                                                                                                                                                  caaGTCGGTAGACGAGGCCTACCGGTGCACGGCCCA‑‑GCACCACTACATGGGCGCATCTGGCCAGCCTGCGTAACAGCGTCTGGAAAAATTCACTCAAGTGCTTCAGTGCAACGCTCTCGGACAAGTGACTTGCATCGATAACCACGGcc    >  4:87091/3‑149 (MQ=255)                                                                                                                                                    aGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCGAATACCACGGCCtt  <  3:158177‑M2/148‑1 (MQ=255)                                                                                                                                                    aGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCGAATACCACGGCCtt  >  8:3796‑M2/2‑149 (MQ=255)                                                                                                                                                    aGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCGAATACCACGGCCtt  <  3:152964‑M2/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      TTGGCGAGAGGAAGAAGCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAG‑TTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCGAATACCACGGCCTT  >  NC_002947/678441‑678735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.