New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 731541	49 (0.930)	4 (0.080)	4/242	NT	7.4%	coding (1081/2565 nt)	clpB	chaperone protein ClpB
	?	NC_002947	= 731561	53 (1.050)					coding (1101/2565 nt)	clpB	chaperone protein ClpB

CATCGAAAAGGACGCCGCCCTGGAGCGCCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCATCGCCATCCTGCGTGGCCTGAAAGAGCGCTATGAAGTGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/731426‑731541 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaccGTCGGTGATGGCCACCTTGTGGTGCACTTCATAGCGCTCTTTCAGGCCACGCAGGATGGCGATGGTGTCTTCCTCGCTC  <  NC_002947/731561‑731483                                                                                                                                                                                                     CATCGAAAAGGACGCCGCCCTGGAGCGCCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCATCGCCATCCTGCGTGGCCTGAAAGAGCGCTATGAAGTGCACCGTCGGTGATGGCCACCTTGTGGTGCACTTCA                                                  >  6:122478/1‑147  ATCGAAAAGGACGCCGCCCTGGAGCGCCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCATCGCCATCCTGCGTGGCCTGAAAGAGCGCTATGAAGTGCACCGTCGGTGATGGCCACCTTGTGGTGCACTTCATA                                                <  5:122478/148‑1               CCGCCCTGGAGCGCCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCATCGCCATCCTGCGTGGCCTGAAAGAGCGCTATGAAGTGCACCGTCGGTGATGGCCACCTTGTGGTGCAC                                                      >  3:102785/1‑129               CCGCCCTGGAGCGCCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCATCGCCATCCTGCGTGGCCTGAAAGAGCGCTATGAAGTGCACCGTCGGTGATGGCCACCTTGTGGTGCAC                                                      <  4:102785/129‑1                                                                                                               TGCACCGTCGGTGATGGCCACCTTGTGGTACACTTCATAGCGCTCTTTCAGGCCACGCAGGATGGCGATGGTGTCTTCCTCGCTC  <  3:38796/85‑1                                                                                                               TGCACCGTCGGTGATGGCCACCTTGTGGTACACTTCATAGCGCTCTTTCAGGCCACGCAGGATGGCGATGGTGTCTTCCTCGCTC  >  4:38796/1‑85                                                                                                                                                                                                     CATCGAAAAGGACGCCGCCCTGGAGCGCCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCATCGCCATCCTGCGTGGCCTGAAAGAGCGCTATGAAGTGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/731426‑731541 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaccGTCGGTGATGGCCACCTTGTGGTGCACTTCATAGCGCTCTTTCAGGCCACGCAGGATGGCGATGGTGTCTTCCTCGCTC  <  NC_002947/731561‑731483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.