| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 773996 = | 41 (0.780) | 4 (0.080) | 3/242 | NT | 9.2% | coding (603/1419 nt) | PP_0665 | glyceraldehyde‑3‑phosphate dehydrogenase |
| ? | NC_002947 | 774036 = | 40 (0.800) | coding (643/1419 nt) | PP_0665 | glyceraldehyde‑3‑phosphate dehydrogenase | |||||
CCGGGGCGTTGCCGCCAAGGTCCATGGCAAGCTTTTTCAAACCAGCCCCGTGCGCAATCTTTTCGCCCGTCGCGAAACCGCCCGTAAAGGAAACCATGCGCACCTCACGCACAGCCACCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/774147‑773996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggctGTGCGTGAGGTGCGCATGGTTTCCTTTACGGGCGGTTTCGCGACGGGCGAAAAGATTGCGCACGGGGCTGGTTTGAAAAAGCTTGCCATGGACCTTGGCGGCAACGCCCCGGTGCTGGTGCTCAAGGACTGCGACCTGGAAGCCA > NC_002947/774036‑774180 CCGGGGCGTTGCCGCCAAGGTCCATGGCAAGCTTTTTCAAACCAGCCCCGTGCGCAATCTTTTCGCCCGTCGCGAAACCGCCCGTAAAGGAAACCATGCGCACCTCACGCACAGCCACCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTG < 1:225428/149‑1 CGCCAAGGTCCATGGCAAGCTTTTTCAAACCAGCCCCGTGCGCAATCTTTTCGCCCGTCGCGAAACCGCCCGTAAAGGAAACCATGCGCACCTCACGCACAGCCACCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTGG < 3:128612/138‑1 CGCCAAGGTCCATGGCAAGCTTTTTCAAACCAGCCCCGTGCGCAATCTTTTCGCCCGTCGCGAAACCGCCCGTAAAGGAAACCATGCGCACCTCACGCACAGCCACCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTGG > 4:128612/1‑138 CTCACGCACAGCCACCAGCGCCTTGCCCAGTTCAGCGCCCCCTGTGGCTGTGCGTGAGGTGCGCATGGTTTCCTTTACGGGCGGTTTCGCGACGGGCGAAAAGATTGCGCACGGGGCTGGTTTGAAAAAGCTTGCCATGGACCTTGGCG > 7:197333/1‑149 CGCACAGCCACCAGCGCCTTGCCCAGTTCAGCGCCCCCTGTGGCTGTGCGTGAGGTGCGCATGGTTTCCTTTACGGGCGGTTTCGCGACGGGCGAAAAGATTGCGCACGGGGCTGGTTTGAAAAAGCTTGCCATGGACCTTGGCGGCAA < 8:197333/149‑1 GCACAGCCACCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTGGCTGTGCGTGAGGTGCGCATGGTTTCCTTTACGGGCGGTTTCGCGACGGGCGAAAAGATTGCGCACGGGGCTGGTTTGAAAAAGCTTGCCATGGACCTTGGCGGCAA > 1:272403/1‑148 GCACAGCCACCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTGGCTGTGCGTGAGGTGCGCATGGTTTCCTTTACGGGCGGTTTCGCGACGGGCGAAAAGATTGCGCACGGGGCTGGTTTGAAAAAGCTTGCCATGGACCTTGGCGGCAA < 2:272403/148‑1 GCTGTGCGTGAGGTGCGCATGGTTTCCTTTACGGGCGGTTTCGCGACGGGCGAAAAGATTGCGCACGGGGCTGGTTTGAAAAAGCTTGCCATGGACCTTGGCGGCAACGCCCCGGTGCTGGTGCTCAAGGACTGCGACCTGGAAGCCA < 1:140081/148‑1 TGTGCGTGAGGTGCGCATGGTTTCCTTTACGGGCGGTTTCGCGACGGGCGAAAAGATTGCGCACGGGGCTGGTTTGAAAAAGCTTGCCATGGACCTTGGCGGCAACGCCCCGGTGCTG > 1:202271/1‑118 TGTGCGTGAGGTGCGCATGGTTTCCTTTACGGGCGGTTTCGCGACGGGCGAAAAGATTGCGCACGGGGCTGGTTTGAAAAAGCTTGCCATGGACCTTGGCGGCAACGCCCCGGTGCTG < 2:202271/118‑1 CCGGGGCGTTGCCGCCAAGGTCCATGGCAAGCTTTTTCAAACCAGCCCCGTGCGCAATCTTTTCGCCCGTCGCGAAACCGCCCGTAAAGGAAACCATGCGCACCTCACGCACAGCCACCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/774147‑773996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggctGTGCGTGAGGTGCGCATGGTTTCCTTTACGGGCGGTTTCGCGACGGGCGAAAAGATTGCGCACGGGGCTGGTTTGAAAAAGCTTGCCATGGACCTTGGCGGCAACGCCCCGGTGCTGGTGCTCAAGGACTGCGACCTGGAAGCCA > NC_002947/774036‑774180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |