New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 806683	46 (0.870)	3 (0.060)	3/240	NT	6.6%	coding (647/2832 nt)	PP_0693	hypothetical protein
	?	NC_002947	= 806709	42 (0.840)					coding (621/2832 nt)	PP_0693	hypothetical protein

AATGCGGTGCAGCTTGCCACGCAGGATGTCGCGCTGGGCCACGCCACCGGCCAGGGCCTCGACCAACGGGCCGGCAGCGACCAGGGCGTTGTAGTCCTGCTCCATGCGGCGTACGTCGCGGAAGGCTTCCTCGCACGCAGCGATGTAGTCGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/806529‑806683 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacgcCTTCGAGCACAGCCTGCGCTCGGGCAGCGTCGACTACATCGCTGCGTGCGAGGAAGCCTTCCGCGACGTACGCCGCATGGAGCAGGACTACAACGCCCTGGTCGCTGCCGGCCCGTTGGTCGAGGCCCTGGCCGGTGGCGTGGC  <  NC_002947/806709‑806566                                                                                                                                                                                                                                                                                                             AATGCGGTGCAGCTTGCCACGCAGGATGTCGCGCTGGGCCACGCCACCGGCCAGGGCCTCGACCAACGGGCCGGCAGCGACCAGGGCGTTGTAGTCCTGCTCCATGCGGCGTACGTCGCGGAAGGCTTCCTCGCACGCAGCGATGTAGT                                                                                                                                                        <  2:90796/149‑1                                     GGCCACGCCACCGGCCAGGGCCTCGACCAACGGGCCGGCAGCGACCAGGGCGTTGTAGTCCTGCTCCATGCGGCGTACGTCGCGGAAGGCTTCCTCGCACGCAGCGATGTAGTCGACGCCTTCGAGCACAGCCTGCGCTCGGGCAGCGT                                                                                                                    <  5:82978/149‑1                                                                               GACCAGGGCGTTGTAGTCCTGCTCCATGCGGCGTACGTCGCGGAAGGCTTCCTCGCACGCAGCGATGTAGTCGACGCCTTCGAGCACAGCCTGCGCTCGGGCAGCG                                                                                                                     <  7:76273/106‑1                                                                               GACCAGGGCGTTGTAGTCCTGCTCCATGCGGCGTACGTCGCGGAAGGCTTCCTCGCACGCAGCGATGTAGTCGACGCCTTCGAGCACAGCCTGCGCTCGGGCAGCG                                                                                                                     >  8:76273/1‑106                                                                                                                                                     TCGACGCCTTCGAGCACAGCCTGCGCTCGGGCAGCGTCGACTACATCGCTGCGTGCGAGGAAGCCTTCCGCGACGTACGCCGCATGGAGCAGGTCTACAACGCCCTGGTCGCTGCCGGCCCGTTGGTCGAGGCCCTGGCCGGTGGCGTG    >  5:10369/1‑149                                                                                                                                                     TCGACGCCTTCGAGCACAGCCTGCGCTCGGGCAGCGTCGACTACATCGCTGCGTGCGAGGAAGCCTTCCGCGACGTACGCCGCATGGAGCAGGACTACAACGCCCTGGTCGCTGCCGGCCCGTTGGT                          >  5:101181/1‑127                                                                                                                                                     TCGACGCCTTCGAGCACAGCCTGCGCTCGGGCAGCGTCGACTACATCGCTGCGTGCGAGGAAGCCTTCCGCGACGTACGCCGCATGGAGCAGGACTACAACGCCCTGGTCGCTGCCGGCCCGTTGGT                          <  6:101181/127‑1                                                                                                                                                       GACGCCTTCGAGCACAGCCTGCGCTCGGGCAGCGTCGACTACATCGCTGCGTGCGAGGAAGCCTTCCGCGACGTACGCCGCATGGAGCAGGACTACAACGCCCTGGTCGCTGCCGGCCCGTTGGTCGAGGCCCTGGCCGGTGGCGTGGC  <  2:308037/149‑1                                                                                                                                                       GACGCCTTCGAGCACAGCCTGCGCTCGGGCAGCGTCGACTACATCGCTGCGTGCGAGGAAGCCTTCCGCGACGTACGCCGCATGGAGCAGGACTACAACGCCCTGGTCGCTGCCGGCCCGTTGGTCGAGGCCCTGGCCGGTGGCGTGG   <  6:111651/148‑1                                                                                                                                                                                                                                                                                                             AATGCGGTGCAGCTTGCCACGCAGGATGTCGCGCTGGGCCACGCCACCGGCCAGGGCCTCGACCAACGGGCCGGCAGCGACCAGGGCGTTGTAGTCCTGCTCCATGCGGCGTACGTCGCGGAAGGCTTCCTCGCACGCAGCGATGTAGTCGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/806529‑806683 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacgcCTTCGAGCACAGCCTGCGCTCGGGCAGCGTCGACTACATCGCTGCGTGCGAGGAAGCCTTCCGCGACGTACGCCGCATGGAGCAGGACTACAACGCCCTGGTCGCTGCCGGCCCGTTGGTCGAGGCCCTGGCCGGTGGCGTGGC  <  NC_002947/806709‑806566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.