| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 818952 | 50 (0.950) | 4 (0.080) | 4/248 | NT | 7.8% | coding (106/627 nt) | PP_0705 | DNA‑3‑methyladenine glycosylase |
| ? | NC_002947 | = 818998 | 46 (0.890) | coding (152/627 nt) | PP_0705 | DNA‑3‑methyladenine glycosylase | |||||
CTGCAATCGACTTGATGGAGGTGCCATGATGCTGGCCGACCTTTCGCCTGAGGCCTATCACGAGGCCGCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACGGCATATCGCAGCGATCGGGCCCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/818822‑818952‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCGCACCAATGCCTCATAAGGCTCACGTCCCGGCGTAGCCTGGTGCAGGCAGGGCCCGATCGCTGCGATATGCCGTGACCAGTCCGGGTCAAGTGCCGCCAGGTGTTGCGCGGCCTCGTGATAGGCCTCAGGCGAAAGGTCGGCCAGCA < NC_002947/818998‑818851 CTGCAATCGACTTGATGGAGGTGCCATGATGCTGGCCGACCTTTCGCCTGAGGCCTATCACGAGGCCGCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACGGCATATCGCAGCGATCGGGCCCTGCC > 7:235965/1‑131CTGCAATCGACTTGATGGAGGTGCCATGATGCTGGCCGACCTTTCGCCTGAGGCCTATCACGAGGCCGCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACGGCATATCGCAGCGATCGGGCCCTGCC < 8:235965/131‑1 GACTTGATGGAGGTGCCATGATGCTGGCCGACCTTTCGCCTGAGGCCTATCACGAGGCCGCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACGGCATATCGCAGCGATCGGGCACTGCCCGCACCAATGCCTCATAAGGCTCACG > 5:283983/1‑149 GCCGACCTTTCGCCTGAGGCCTATCACGAGGCCGCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACGGCATATCGCAGCGATCGGGCTCTGCCCGCACCAATGCCTCATAAGGCTCACGTCCCGGCGTAGCCTGGTGCAGGCA < 6:283983/147‑1 CGCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACAGCATATCGCAGCGATCGGGCCCTGCCCGCACCAATGCCTCATAAGGCTCACGTCCCGGCGTAGCCTGGTGCAGGCAG > 5:191840/1‑116 CGCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACAGCATATCGCAGCGATCGGGCCCTGCCCGCACCAATGCCTCATAAGGCTCACGTCCCGGCGTAGCCTGGTGCAGGCAG < 6:191840/116‑1 CCGCACCAATGCCTCATAAGGCTCACGTCCCGGCGTAGCCTGGTGCAGGCAGGGCCCGATCGCTGCGATATGCCGTGACCAGTCCGGGTCAAGTGCCGCCAGGTGTTGCGCGGCCTCGTGATAGGCCTCAGGCGAAAGGTCGGCCAGCA < 3:148300/149‑1 CCGCACCAATGCCTCATAAGGCTCACGTCCCGGCGTAGCCTGGTGCAGGCAGGGCCCGATCGCTGCGATATGCCGTGACCAGTCCGGGTCAAGTGCCGCCAGGTGTTGCGCGGCCTCGTGAT > 4:55822/1‑122 CCGCACCAATGCCTCATAAGGCTCACGTCCCGGCGTAGCCTGGTGCAGGCAGGGCCCGATCGCTGCGATATGCCGTGACCAGTCCGGGTCAAGTCCCGCCAGGTGTTGCGCGGCCTCGTGAT < 3:55822/122‑1 CTGCAATCGACTTGATGGAGGTGCCATGATGCTGGCCGACCTTTCGCCTGAGGCCTATCACGAGGCCGCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACGGCATATCGCAGCGATCGGGCCCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/818822‑818952‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCGCACCAATGCCTCATAAGGCTCACGTCCCGGCGTAGCCTGGTGCAGGCAGGGCCCGATCGCTGCGATATGCCGTGACCAGTCCGGGTCAAGTGCCGCCAGGTGTTGCGCGGCCTCGTGATAGGCCTCAGGCGAAAGGTCGGCCAGCA < NC_002947/818998‑818851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |