| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1160962 | 51 (0.970) | 3 (0.060) | 3/238 | NT | 5.7% | coding (774/846 nt) | gtsC | mannose/glucose ABC transporter permease |
| ? | NC_002947 | = 1160981 | 51 (1.030) | coding (793/846 nt) | gtsC | mannose/glucose ABC transporter permease | |||||
AGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1160814‑1160962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgccaCCACGTAGACCAGCAGGGTTGGCAGGCCAGCGATCATCGCTGCCGCCATGTCGACGTTGTATTCCTTGGCCCCGGTGCTGGTATTGACCAGATTGTTCAGGGCTACGGTGATCGGTTGCGAATCGCCGCTGGAGAACACCA < NC_002947/1160981‑1160841 AGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCT > 1:160293/1‑145AGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCT < 2:160293/145‑1 TCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGC > 8:320892/1‑126 TTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCACCACGTAGACCAGCAGGGTTGGCAGGCCAGC < 4:123222/148‑1 GCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCACCACGTAGACCAGCAGGGTTGGCAGGCCA < 5:105265/129‑1 GCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCACCACGTAGACCAGCAGGGTTGGCAGGCCA > 6:105265/1‑129 GCCTGCCACCACGTAGACCAGCAGGGTTGGCAGGCCAGCGATCATCGCTGCCGCCATGTCGACGTTGTATTCCTTGGCCCCGGTGCTGGTATTGACCAGATTGTTCAGGGCTACGGTGATCGGTTGCGAATCGCCGCTGGAGAACACCA > 5:25078/1‑149 AGATCTGGAACGACTTCCTGTTCGGCGTGGTGTTCTCCAGCGGCGATTCGCAACCGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1160814‑1160962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgccaCCACGTAGACCAGCAGGGTTGGCAGGCCAGCGATCATCGCTGCCGCCATGTCGACGTTGTATTCCTTGGCCCCGGTGCTGGTATTGACCAGATTGTTCAGGGCTACGGTGATCGGTTGCGAATCGCCGCTGGAGAACACCA < NC_002947/1160981‑1160841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |