| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1266340 = | 44 (0.830) | 3 (0.060) | 3/244 | NT | 6.2% | coding (1648/2442 nt) | quiP | acyl‑homoserine lactone acylase QuiP |
| ? | NC_002947 | 1266412 = | 49 (0.970) | coding (1576/2442 nt) | quiP | acyl‑homoserine lactone acylase QuiP | |||||
CGCAGCCTGCCGCGCGGCTATGGCATGCAGCTGTCCAGCACCTGGTACTACCCCGAGCGTGCCGAACGACTGGCACAGCTGGCCGGCAACGGTCGCCACGACAGTCGCAGCCTGATGGCCCTGCAGAACGACCAGGTGACCTTGCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1266490‑1266340‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaGCTGTGCCAGTCGTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGCGCTGGTTGGCATGGCCGATCCAGCCCGCGGGTGGGTCCTGGTCGTACGGGTGCAGCATCGGGTCGGCATA > NC_002947/1266412‑1266559 CGCAGCCTGCCGCGCGGCTATGGCATGCAGCTGTCCAGCACCTGGTACTACCCCGAGCGTGCCGAACGACTGGCACAGCTGGCCGGCAACGGTCGCCACGACAGTCGCAGCCTGATGGCCCTGCAGAACGACCAGGTGACCTTGCTGGC > 5:193212/1‑149 GCAGCCTGCCGCGCGGCTATGGCATGCAGCTGTCCAGCACCTGGTACTACCCCGAGCGTGCCGAACGACTGGCACAGCTGGCCGGCAACGGTCGCCACGACAGTCGCAGCCTGATGGCCCTGCAGAACGACCAGGTGACCTTGCTGGCC < 5:347456/149‑1 TGGCCGGCAACGGTCGCCACGACAGTCGCAGCCTGATGGCCCTGCAGAACGACCAGGTGACCTTGCTGGCCAGCTGTGCCAGTCGTTCGGCACGCTCGGGGTAGTACCAGG > 3:33921/1‑111 TGGCCGGCAACGGTCGCCACGACAGTCGCAGCCTGATGGCCCTGCAGAACGACCAGGTGACCTTGCTGGCCAGCTGTGCCAGTCGTTCGGCACGCTCGGGGTAGTACCAGG < 4:33921/111‑1 GGCCGGCAACGGTCGCCACGACAGTCGCAGCCTGATGGCCCTGCAGAACGACCAGGTGACCTTGCTGGCCAGCTGTGCCAGTCGTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGC > 6:82766/1‑149 GCCAGCTGTGCCAGTCGTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGCGCTGGTTGGCATGGCCGATCCAGCCCGCGGGTGGGTCCTGGTCGTACGGGTGCAGCATCGGGTCGGC < 6:347456/149‑1 CAGCTGTGCCAGTCGTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGCGCTGGTTGGCATGGCCGATCCAGCCCGCGGGTGGGTCCTGGTCGTACGGGTGCAGCATCGGGTCGGCA > 5:319477/1‑148 AGCTGTGCCAGTCGTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGCGCTGGTTGGCATGGCCGATCCAGCCCGCGGGTGGGTCCTGGTCGTACGGGTGCAGCATCGGGTCGGCATA < 5:323589/149‑1 CGCAGCCTGCCGCGCGGCTATGGCATGCAGCTGTCCAGCACCTGGTACTACCCCGAGCGTGCCGAACGACTGGCACAGCTGGCCGGCAACGGTCGCCACGACAGTCGCAGCCTGATGGCCCTGCAGAACGACCAGGTGACCTTGCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1266490‑1266340‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaGCTGTGCCAGTCGTTCGGCACGCTCGGGGTAGTACCAGGTGCTGGACAGCTGCATGCCATAGCCGCGCGGCAGGCTGCGCTGGTTGGCATGGCCGATCCAGCCCGCGGGTGGGTCCTGGTCGTACGGGTGCAGCATCGGGTCGGCATA > NC_002947/1266412‑1266559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |