| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1318866 = | 57 (1.080) | 5 (0.100) | 4/246 | NT | 9.5% | coding (90/870 nt) | PP_1152 | membrane fusion efflux protein |
| ? | NC_002947 | 1318909 = | 40 (0.780) | coding (133/870 nt) | PP_1152 | membrane fusion efflux protein | |||||
GAAGCGCTCGCGGTCAATACTCATCAACAAGTCGCCAGCCTTGACCTGCTGGTTGTCATGGACCTTGAGTTCGCGAACCCAGCCGGACACATCAGGCGCAATCACCACCACATCGGCGCGCACACGGGCATCACGCGTCCATGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1319013‑1318866‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgGTGATTGCGCCTGATGTGTCCGGCTGGGTTCGCGAACTCAAGGTCCATGACAACCAGCAGGTCAAGGCTGGCGACTTGTTGATGAGTATTGACCGCGAGCGCTTCCAGGCCGCGCTCGATCAGGCCAGCGCGGTGACC > NC_002947/1318909‑1319046 GAAGCGCTCGCGGTCAATACTCATCAACAAGTCGCCAGCCTTGACCTGCTGGTTGTCATGGACCTTGAGTTCGCGAACCCAGCCGGACACATCAGGCGCAATCACCACCACATCGGCGCGCACACGGGCATCACGCGTCCATGGGGT > 8:199050/1‑147 ACCACCACATCGGCGCGCACACGGGCATCACGCGTCCATGGGGTGGTGATTGCGCCTGATGTGTCCGGCTGGGTTCGCGAACTCAAGGTCCATGACAACCAGCAGGTCAAGGCTGGCGACTTGTTGATGAGTATTGACCGCGAGCGCTT > 2:290661/1‑149 CACCACATCGGCGCGCACACGGGCATCACGCGTCCATGGGGTGGTGATTGCGCCTGATGTGTCCGGCTGGGTTCGCGAACTCAAGGTCCATGACAACCAGCAGGTCAAGGCTGGCGACTTGTTGATGAGTATTGACCGCGAGCGCTTC > 4:58361/1‑148 CACCACATCGGCGCGCACACGGGCATCACGCGTCCATGGGGTGGTGATTGCGCCTGATGTGTCCGGCTGGGTTCGCGAACTCAAGGTCCATGACAACCAGCAGGTCAAGGCTGGCGACTT < 5:286250/120‑1 CACCACATCGGCGCGCACACGGGCATCACGCGTCCATGGGGTGGTGATTGCGCCTGATGTGTCCGGCTGGGTTCGCGAACTCAAGGTCCATGACAACCAGCAGGTCAAGGCTGGCGACTT > 6:286250/1‑120 TCCATGGGGTGGTGATTGCGCCTGATGTGTCCGGCTGGGTTCGCGAACTCAAGGTCCATGACAACCAGCAGGTCAAGGCTGGCGACTTGTTGATGAGTATTGACCGCGAGCGCTTCCAGGCCGCGCTCGATCAGGCCAGCGCGGTGACC < 3:58361/149‑1 GAAGCGCTCGCGGTCAATACTCATCAACAAGTCGCCAGCCTTGACCTGCTGGTTGTCATGGACCTTGAGTTCGCGAACCCAGCCGGACACATCAGGCGCAATCACCACCACATCGGCGCGCACACGGGCATCACGCGTCCATGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1319013‑1318866‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgGTGATTGCGCCTGATGTGTCCGGCTGGGTTCGCGAACTCAAGGTCCATGACAACCAGCAGGTCAAGGCTGGCGACTTGTTGATGAGTATTGACCGCGAGCGCTTCCAGGCCGCGCTCGATCAGGCCAGCGCGGTGACC > NC_002947/1318909‑1319046 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |