| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1465748 = | 64 (1.210) | 3 (0.060) | 3/240 | NT | 5.4% | coding (1443/1560 nt) | algG | poly(beta‑D‑mannuronate) C5 epimerase |
| ? | NC_002947 | 1465806 = | 44 (0.880) | coding (1385/1560 nt) | algG | poly(beta‑D‑mannuronate) C5 epimerase | |||||
TCGTGGTGGGTGGCGAGCTGTCGGCCAACGGCTCCGGCCCGCTGTCGATCGACTCGCCGCTGTCGGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1465860‑1465748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcggcGAGTCGATCGACAGCGGGCCGGAGCCGTTGGCCGACAGCTCGCCACCCACCACGATCAGCGACACCTTGGTGTCGAACGGGTCGAGGGCGATGTCGCGGTCGGTGTCGGACAGGTCTTTGATGTGGCCGT > NC_002947/1465806‑1465935 TCGTGGTGGGTGGCGAGCTGTCGGCCAACGGCTCCGGCCCGCTGTCGATCGACTCGCCGCTGTCGGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCAGCGGC > 7:237742/1‑113TCGTGGTGGGTGGCGAGCTGTCGGCCAACGGCTCCGGCCCGCTGTCGATCGACTCGCCGCTGTCGGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCAGCGGC < 8:237742/113‑1 TCGCCGCTGTCGGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCAGCGGCGAGTCGATCGACAGCGGGCCGGAGCCGTTGGCCGACAGCTCGCCACCCACCACGACCAGCGACACCTTGGTGTCGAACGGGTCGAGGGC > 1:99159/1‑149 GCCGCTGTCGGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCAGCGGCGAGTCGATCGACAGCGGGCCGGAGCCGTTGGCCGACAGCTCGCCACCCACAACGATCAGCGACACCTTGGTGTCGAACGGGTCGAGGGCGA > 7:172297/1‑149 GGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCAGCGGCGAGTCGATCGACAGCGGGCCGGAGCCGTTGGCCGACAGCTCGCCACCCACCACGACCAGCGACACCTTGGTGTCGAACGGGTCGAGGGCGATGTCGCGGT < 2:99159/149‑1 CGGCGAGTCGATCGACAGCGGGCCGGAGCCGTTGGCCGACAGCTCGCCACCCACCACGATCAGCGACACCTTGGTGTCGAACGGGTCGAGGGCGATGTCGCGGTCGGTGTCGGACAGGTCTTTGATGTGGCCGT < 3:252067/134‑1 CGGCGAGTCGATCGACAGCGGGCCGGAGCCGTTGGCCGACAGCTCGCCACCCACCACGATCAGCGACACCTTGGTGTCGAACGGGTCGAGGGCGATGTCGCGGTCGGTGTCGGACAGGTCTTTGATGTGGCCGT > 4:252067/1‑134 CGGCGAGTCGATCGACAGCGGGCCGGAGCCGTTGGCCGACAGCTCGCCACCCACCACGATCAGCGACACCTTGGTGTCGAACGGGTCGAGGGCGATGTCGCGGTCGGT > 7:76463/1‑108 CGGCGAGTCGATCGACAGCGGGCCGGAGCCGTTGGCCGACAGCTCGCCACCCACCACGATCAGCGACACCTTGGTGTCGAACGGGTCGAGGGCGATGTCGCGGTCGGT < 8:76463/108‑1 TCGTGGTGGGTGGCGAGCTGTCGGCCAACGGCTCCGGCCCGCTGTCGATCGACTCGCCGCTGTCGGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1465860‑1465748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcggcGAGTCGATCGACAGCGGGCCGGAGCCGTTGGCCGACAGCTCGCCACCCACCACGATCAGCGACACCTTGGTGTCGAACGGGTCGAGGGCGATGTCGCGGTCGGTGTCGGACAGGTCTTTGATGTGGCCGT > NC_002947/1465806‑1465935 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |